LOC120548698


Basic Information

Item Value
gene id LOC120548698
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 19466663 ~ 19467908 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785114.1
GGGAGGAACTGACATGTCCTGTGCTTGACTGCAAAATTCAATAAAGCACACCGAAACATTGCTTTTTCTCATCAGGCAGGCTAGACATGAACAACACCATGGAAGATGGACTCATGCATGAGTCAAATCTGGGTTATGCTCTGGTCTATGGCTGCATCTTAGCACTGGGTCTGCCTCTTAATGCTGTGTCGCTGTGGATTCTACTTAGACGCCACAGCCTCAAATCCCCCAGCGTCGTCTTCATGGTCAACCTGGCCATCTCTGACCTGCTGCTCGCCATCTCCTTGCCCATGAGGGTCTACTTTTACGCCACAGGCACCTGGCCACTGAGCCCTGAGGCATGTATCTGGACCACAATGCTCTTTCGCAACAACATCCGCTCCAGCTCCATCTTCATCACCTTCATTAGTGTGGACCGACTGCTGGCTGTCGTCTACCCTCTGAGGTCACGCCATCTCCGAACCGCTTCCAACGCCTTGAAAGCTGTTGTGCTCGTTTGGCTGTTTGTGTTGGCATTGAACATCCCGGAGACATTGGAATTTTCAAAATTCATAAAGCGTAAGAATAACTCTACCTGTTTTGAATTTCAACATAGGCCTAAAGTCACCATTAATAACGTTTCCCAACGCAGCTATCATAAATCAGCATTTGCTACTTATTTACCGTCTGTGTTAACGCTCATCCTACTGGCAGTCAACGTTGTGTGCACCACGTCGGTGTCTTGGACTCTACGCAGTGACTCAGCAAGGGTCAACAACAAGGTGAATGTCATGCTAATTTTTGTCATGAACTTGGTTATGTTCATCATATGTTTCTTGCCTGTGACGgttcatttattatttcttgGGCTACCTGTGAGTACACCTTTAGTATGTCTTGCTAGTTTTAACTGTTGTCTGGATCCACTTTTGTATTACTTTTCTCTGGATGCCTTCTTGAAGAACAAAGAGGATATAGAACTTGCAAGAGAACCAGACCACGGACATACTATTTTCATgcactagtctcgctttgccagaccttcctataCAGCGCTGCGGGCGAGggtctagctagtccacacagcattccgggatgggagaaaatgtgctctggttcatagatatttctttaaaccaattgtGAATCACAAACCGTGGCACTGTCTGGCGCTtagcaaaatagcctcaggaagaaacttgttttggtggaacacgtgtacgttcaaaagttgttttagtcgtgcaacagataactcagatttgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785114.1 True 1246 mRNA 0.46 1 19466663 19467908

Neighbor

gene id symbol gene type direction distance location
her8.2 LOC100691593,LOC105923939 coding downstream 26523 19438240 ~ 19440140 (-)
her13 LOC103373083,LOC104919393 coding downstream 32368 19431359 ~ 19434295 (-)
mrps22 mrps22,LOC103373397 coding downstream 208841 19252336 ~ 19257822 (-)
LOC120552531 NA coding downstream 274873 19190494 ~ 19191790 (-)
LOC120552522 NA coding downstream 297537 19168047 ~ 19169126 (-)
rinl NA coding upstream 47355 19515263 ~ 19525581 (-)
sirt2 sirt2 coding upstream 57813 19525721 ~ 19532651 (-)
dmac2 atp5sl,LOC102790974 coding upstream 65202 19533110 ~ 19536541 (-)
LOC120548388 LOC104927217,LOC101068162,LOC100693448,LOC106522132,LOC103364869,LOC101175254,LOC102216590 coding upstream 96310 19564218 ~ 19595131 (-)
nop53 NA coding upstream 130242 19598150 ~ 19609021 (-)
G18127 NA non-coding downstream 61302 19383403 ~ 19405361 (-)
G18002 NA non-coding downstream 232206 19230919 ~ 19234457 (-)
G17986 NA non-coding downstream 311412 19154962 ~ 19155251 (-)
G17964 NA non-coding downstream 717262 18749198 ~ 18749401 (-)
G17936 NA non-coding downstream 872990 18592975 ~ 18593673 (-)
LOC120573122 NA non-coding upstream 70467 19538375 ~ 19541130 (-)
G18179 NA non-coding upstream 157495 19625403 ~ 19628640 (-)
G18184 NA non-coding upstream 181308 19649216 ~ 19649652 (-)
LOC120548779 coq8b,LOC103364879,LOC107395920,LOC108247334 non-coding upstream 286979 19754887 ~ 19755993 (-)
G18216 NA non-coding upstream 383996 19851904 ~ 19856310 (-)
LOC120545639 eif4g1 other downstream 1243770 18179013 ~ 18222893 (-)
zgc:165508 fam131a,LOC102799247 other downstream 1314695 18127466 ~ 18151968 (-)
LOC120552194 NA other downstream 1576002 17799999 ~ 17890661 (-)
xaf1 LOC107094331 other downstream 1987760 17472947 ~ 17478903 (-)
G17597 NA other downstream 2535669 16848161 ~ 16930994 (-)
fbxo46 fbxo46,LOC102786997 other upstream 233319 19701227 ~ 19717307 (-)
si:ch211-11n16.2 LOC104927205,LOC101481481,LOC100694251,LOC103369702,LOC107094496 other upstream 332843 19800751 ~ 19810130 (-)
LOC120547993 NA other upstream 669164 20137072 ~ 20141538 (-)
si:ch1073-340i21.1 NA other upstream 1626269 21094177 ~ 21097201 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other upstream 1769280 21237188 ~ 21261923 (-)

Expression


Co-expression Network