LOC120548891


Basic Information

Item Value
gene id LOC120548891
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 37771547 ~ 37772536 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785406.1
GCAGTACCTCAAAAACTTGTGTGTTTGCttaaaaacatatacatatatatatacacacctttGTATATGGCAGATAACCGCTCACTGGTTGGTGGTGAACCTTTACAGAGGCAGATCAACGACAAGGTCATTATTGTGCAGATCCTGGTAATGATTTTTCTTTGCATTAACTTTTTGCTTATtgtgacctttttaaaaaaggagAGCTTACACACAACTGCACGCTACATGTTATTTGCTACTTCTATACTGTCTGATAGCTTTATATTATTCATGTCTGATATCCTGCTCATCTTCAACTATTTTGAAATCACCATGAATGTTTGGTCATGTATCATTATCTCTGTTGTAGCACTTCTATATAGTACAGTCACCCCAGTTACTCTGACAGCAATGACCCTGGAGCGCTACGTGGCTATTTGCATGCCTCTGCGTCATGGAGAGCTGTGCTCCTCTCGCAGCACTATGCATTGCATCCTCATCATTCATGGCCTCAGCTCTGTACCCTGTATTGTTGTTCTTTCCACCTTCTTTGCATCAGCCTCTCTTAGGTTTTACAAACAATACAGTATATGCTCTGTTGAGATATTCATTTTGTACAGATGGCAGGATCACATTAGGTCAGCTGTGTATCAGTTTTACTTCTTGATTATGTGTATAACTATTATATTCTGCTATGTTAAAATAATGAAAGTGGCCAAATCTGCATCAGGAGAGAATAGAAAGTCAAACTGGAAAGGTCTCAGAACGGTAATTCTTCATGGTTTCCAGCTGATGCTCTGTCTCATCCAGCTGTGGTGTCCATTCATAGAAACTTCTATACTTCAGATTAGTTTAAGATTATTTATAGATGTCAGGTACACTAACTACATACTGTTTAGTCTTGCTCCAAGATGTCTGAGTCCTCTCATTTATGGCCTCAGGGATGAAACATTTTTTCTTGCACTGAAAAACTATGCATTCTTCAGTTTGTATAAAAGAAATATTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785406.1 True 990 mRNA 0.38 1 37771547 37772536

Neighbor

gene id symbol gene type direction distance location
or95a1 NA coding downstream 23834 37746746 ~ 37747713 (-)
c2cd3 NA coding downstream 40805 37709784 ~ 37730742 (-)
camkk1b LOC103356711,LOC100697126,LOC101483702 coding downstream 85146 37675466 ~ 37686401 (-)
LOC120552187 LOC104967580,LOC102298130,LOC100699189 coding downstream 131934 37630312 ~ 37639613 (-)
zgc:174895 NA coding downstream 172605 37584241 ~ 37598942 (-)
LOC120551756 NA coding upstream 3138 37775674 ~ 37776606 (-)
LOC120551759 NA coding upstream 12407 37784943 ~ 37785878 (-)
rrp8 NA coding upstream 96996 37869532 ~ 37876155 (-)
stim1a stim1,LOC101465674,LOC102214188,LOC103353587 coding upstream 963629 38736165 ~ 38765038 (-)
pgap2 LOC103353585,LOC100712494,LOC102213892 coding upstream 995009 38767545 ~ 38770608 (-)
G22371 NA non-coding downstream 103603 37667639 ~ 37667944 (-)
G22321 NA non-coding downstream 205092 37566234 ~ 37566455 (-)
G22320 NA non-coding downstream 205372 37565863 ~ 37566175 (-)
G22308 NA non-coding downstream 344243 37423842 ~ 37427304 (-)
G22291 NA non-coding downstream 395242 37373188 ~ 37376305 (-)
G22458 NA non-coding upstream 129720 37902256 ~ 37903681 (-)
G22462 NA non-coding upstream 133826 37906362 ~ 37910118 (-)
LOC120575673 NA non-coding upstream 531270 38303806 ~ 38351320 (-)
G22520 NA non-coding upstream 579846 38352382 ~ 38352586 (-)
G22563 NA non-coding upstream 1041243 38813779 ~ 38814207 (-)
p4ha3 p4ha3 other downstream 25265 37732841 ~ 37746282 (-)
LOC120571840 LOC103356713,LOC100701072,LOC102300918,LOC101484608,LOC102193268 other downstream 73408 37692438 ~ 37698139 (-)
si:ch211-105f12.2 LOC103368707,LOC107379995,LOC102080198,LOC107090084 other downstream 115752 37651459 ~ 37655795 (-)
tada2a tada2a other downstream 320707 37438986 ~ 37450840 (-)
G22245 dynll2a,LOC107554284 other downstream 502227 37264573 ~ 37269320 (-)
robo2 NA other upstream 580488 38353024 ~ 38648599 (-)
LOC120570635 sel1l3,LOC103353588 other upstream 954972 38727508 ~ 38735823 (-)
LOC120546248 LOC103363423,LOC101478053,LOC102201911,LOC102303851 other upstream 2171035 39943571 ~ 40033156 (-)
cadm2b cadm2,LOC100695412,LOC103378151,LOC106520568,LOC102793287 other upstream 2517469 40290005 ~ 40470176 (-)
cntn5 NA other upstream 4257137 42029673 ~ 42167037 (-)

Expression


Co-expression Network