LOC120548947 (LOC103372137,LOC102304476)


Basic Information

Item Value
gene id LOC120548947
gene name LOC103372137,LOC102304476
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 10405189 ~ 10424770 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785453.1
GTTGCGCGTTcaagggagggaaaaaagaaaTCGGAGTCTGCGCAGTAGGGTTTGTTCTCGACACTCCGAACTTTCGGGAGAACCgcggaggaaggaggagagggagagaacaaCGCCATTTTTTCTGGCCCTGTGCAGTCAGACAGGTGTCTTCAGTCCAGGCTGGCGGGTGGCTCGGGACCAGACAGTCCTggtgtggggtggggtgggcGCTGAGATCTGGACTCTTGTACCAAACTGAGTTGTAGCGGGCTGTGAGCGGCGGCGTCGGCGGAGAGGGAGAGGTCGAGGCTGGAGCCATGTCGTCGGCCTTGTGGCGCGAGGACGATGAAGAGTTTAAGTTGGGAGCGGTGAGAGCCGCGGGGGCGAGAGGCAAGCCGAGGTTCTCCATGACGGAGATCAAACTGCTGCTGGAGGCGGTGAAAAGGAACAGATACATCCTCCTCAAGAAGTTTAACCAAGGCGTGTCGGCTGAAGCCAAGAAACAAACCTGGACTGAAAtcaccaatcagatcaacggtCTGGGAGAGAATCACAGAGAGgTGCGTCAGATCATGAAGAAATGGGCCGACCTGAAATGTGATGGCAGGCGAGCGCTCCGGGGCCCCAACGGCAGCAACGTGAGGAAGAAGAGCATGGGCCCCGTGGAGAGGATGGTCCACAAGATCCTAATGATGAGTCCCAGAGGAGGTGGCGAAAGTGATTTTGACCTCGACGAAGAGGACGATTTTTCAAAGGTTTACAGCAAAGGCCCGCCCCCCAATGCCCCCCCGTTCTCCTACCTCAGCTTGACGGACAGCTCCCAGTCTATACCCGGAGGAGCCTCCTACgacttctctcctctctcctccccggAGAAAGATCTCGCCGGCGATCCTTTCTACTCGTCCCCTGACTTTGACCTGGCTGACGATGGAGACCACACCATGGACTTTGAAGAGAACGACGACTCCTTGTTCTCCTCCTACCCTTCGTCTCTCCCCCGGCCCGCGTCCCCGTCTCTGGACCCGCTGCCCGACAACGCCCTGCTGAGGATGAAGCCGGTCCACACCTACTCCCGAAACAGCCAGAACCACACCACCCCCCAGAACCACAACACCTCCCCGAGACCTGCACCTGCTGGACCCTCGGCCCCCCCTTTCCCTCCAGACGcagcctcttcctcctcctcttcctcggcCGCTCCGCCCCCACCGGAGCCCTCCTCAACCTCCACCATGACTTTCTCTTCCCTCCTTGCTCCTTCCTCCTCATTCACTCCCCCGCTTCCTCCTGCCTCCATCTCTgcatctccttcctcttcttcaccCTCTAAAtctgtccctccccttcctgcCGCAGTATCTTCCTCCTCCGTTGCTTCCAACGCAGCCTCTTCCAACTCCCATCAGCcgtccccctcctcctcttcctcagtcCTCCCACCcaatcctcctcctccctccgcCGCCGCCGCAGGCCCGGGCGCCGCGTCGGACCCTCTCCCGGGCGGAGCGTCCCAGCGCCGGGCCCGCGAGCAGGTGGCCCAGATGGCCAATcagagcctgcagcagcagcgcgCCAGCCGCATGCTGCTGACCTCGGTGTCCCAGTCTCTGGAGGTGCTGGCCCAGTCGGTCCAGCTGCTGGTGGAGAGCCAGCAGGAGTTCGTGCAGGAgtctctgctgctgcagagGGAGACCGTGGACGTCCTGAGGGATTTCTCCAACACGGCGCTCACCATGCTGAGGGACAAAACCAACGGGGGCCAGCTGCCGCATCCTCATCCCGCCGCGCACTTCTGAGGAAATGGTATCGCGAACCAAAACCAAGTGCAGGTAAATTGGCGGGTAAATGTTGGCAGCATTACAGGCGATCAGCCGGCACGTGGAGGGGATTTCAAACCTCCTTCCCTCTCGTTGGTCTAATCGTGAAAAGAGACGGCTGACTATTTGATGGCTGCTGGACAGAAAAGTTTCTTCCTGAAAATGGGACAAAGTTTTTGCCCAAAGGCACAAACACACGAGTTTTAAGCCattatttcaacgtttttttggtttttttttgagACGTGCCTGCATCTTTCTTCTATTTCTTCTTCTTACATattcactgtttgtttgttgcaggctcgtgttttttttccacactgTAAACAATTTTTACTGTAATGTGTCAGTAGAGTATGAAAGTACTAACTAGGGCTGCTGaactattattttcatagtcgattaatctgttttattattttctcgattaatcgattagttgtttgataaaatgaaatgtcagaaaatggtaacAAATGTTGATATCTGTCTcccaaaactcaaagatattcaggttcctgtcacagaggagcgaagaaaactagaaaatattcacatctaACAAGctcacctttttctttttttcctaaaaaaGGACTCAAACCAGGTTCAAGGGGACTGTTTTTCTGCTTAAGTTGGAGACGTGGTAACATTCTGagtgttttcttaatttgtctAAAACCTGCGGAAGATTCCGCGGAAAACTCTGCGACCGCACATCCAGTGCGGCCCTGCTCATCGCCAACCACGTCCGGTCCACATCCTCACACCGGATGCTGCGGTGGTACATGTCAGTGATGCAACAGCCACTTTTGAGAacaaatattataataaaaacactttttttttttttctttttaattgatATGTTTTGTGGAATTTACTGCGGTTAATGAAAATAACTTGCTTCTGTAATTTCCAAAGGGTTCATTTGAGTGGTTTTTCAGAATAAAGGACTAATTGGTTCTTGTTTTATCCGTTAGATCTAATAATCCTCTCATATTGCCCACCATTTAAAGCAGTATTCTTGTTCTAGATGAAAACACTGAAGGTGTGAATTGCAAAGTGGCCGAAATTGTGCTGTTAACAAGACTTTTGAATGAGAATAAAACCGTCTACTATGCAGTGGATGGAGGAAAATATTAGTGAAATTGTTAATGGAAATATTAACGTGACAGCAAGCCAATGTTGCAGCTGGCGCGCACTGAGAGTTCATACCAAGCTCTGCATGTGTTAGACTGTGAGCCGCTGTGGCCTGTGGCAAAGCGAGCTGATTTTTTATAACGTAGATATAATATAGAATAAGCTTGAGCTAACCCCCTGCAGAAAATTGTCTGCCTCCGTAATCCTTCACCTCAGCCTGGCAAGCgtcacatttctgtttttgatTTATGAACGTTTCTGGAAAGACTTATTAAATCTCCAGGTCTGTTTTTGAATTTGATACAAATAGCAGTTTATGGGAGATTCCGCTGTTATTTACAACCACCTATGCATTTTGTGGTGTCAAACCCCCCAATAAACAACCCAAATATTCAGTGGAGAAGCTAAGACGGCCGCGTGAGCCTGGAAACATGTTAGTATTTCAGATGTTCTGCTTTTTGAAACTCTTTGTCCTCTGACCCTCTTCTTTGTCCCGCTCGTAGCATAGTAGTCTAAATCTGCAGACTGTCCCTAGTTGAACATGTTTCCTCACTTGCAGTTGGCTTtgtgtctgactgactgaccaAATGACTTGTAACTGTCTGCTGTAACACCAGGCTATGTGATGTTTCCTTACAACCAAATCCTGAGAATAaagattttattattaaaatgaa

Function

NR:

description
PREDICTED: wiskott-Aldrich syndrome protein family member 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785453.1 True 3628 mRNA 0.50 7 10405189 10424770

Neighbor

gene id symbol gene type direction distance location
LOC120550666 LOC105915347 coding upstream 28378 10359389 ~ 10376811 (+)
si:ch211-137a8.4 LOC103372141,LOC107102523,LOC105915351,LOC101172006,LOC106961384,LOC103378353 coding upstream 285350 10055994 ~ 10119839 (+)
trnar-ucu_11 NA coding upstream 520585 9884513 ~ 9884604 (+)
trnar-ucu_10 NA coding upstream 535265 9869833 ~ 9869924 (+)
clip3 clip3 coding upstream 607463 9750631 ~ 9797726 (+)
LOC120547173 NA coding downstream 9715 10434485 ~ 10445489 (+)
LOC120551211 NA coding downstream 30987 10455757 ~ 10464353 (+)
LOC120551226 NA coding downstream 552435 10977205 ~ 10979429 (+)
LOC120553334 NA coding downstream 1111015 11535785 ~ 11540819 (+)
rps3 rps3,LOC102795110 coding downstream 1129882 11554652 ~ 11562928 (+)
G16103 NA non-coding upstream 11219 10393420 ~ 10393970 (+)
G16101 NA non-coding upstream 17201 10387672 ~ 10387988 (+)
G16048 NA non-coding upstream 209979 10188963 ~ 10195210 (+)
G16044 NA non-coding upstream 219504 10183693 ~ 10185685 (+)
G16033 NA non-coding upstream 238720 10139003 ~ 10166469 (+)
G16115 NA non-coding downstream 76761 10501531 ~ 10553760 (+)
G16125 NA non-coding downstream 235083 10659853 ~ 10660419 (+)
G16171 NA non-coding downstream 591605 11016375 ~ 11016658 (+)
G16176 NA non-coding downstream 767380 11192150 ~ 11192454 (+)
G16178 NA non-coding downstream 834197 11258967 ~ 11259682 (+)
G15712 NA other upstream 401594 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 401817 9866710 ~ 10003372 (+)
G15640 NA other upstream 735660 9598313 ~ 9669529 (+)
G16267 NA other downstream 1469734 11894504 ~ 11900873 (+)
G16467 clns1a,LOC102781126 other downstream 1971225 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 2017360 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 2205904 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 2444060 12868830 ~ 12922469 (+)

Expression


Co-expression Network