cuedc1b (cuedc1)


Basic Information

Item Value
gene id cuedc1b
gene name cuedc1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 45815082 ~ 45861092 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785495.1
CGGTCACCAGCTGAATTTAATGGCATAGGGGACAGTATCCTTCTGGTTCCCATTACAAtgccaaaaacaaaaaccacagTCCTTCTGCTCAGCTGTGCTCCTGTGGATATCTGTTTCGATGAACCGTCTGCCCCTCAGTCCGTGCTGATGACTATGGTGTAGCTATGTGGGTTTCCTGACGGATTTTGACTAATCTTTACCTGGTGACCACCTGTCTCATCCCGTCCCTGCTCGCCTGTAATACAGACAGCCATGCCGGATGCAGCTGAATAACGAGTAGcattggggtggggggggaaacAAGTTTTTCTAAACTCCCATCAAAAGGCTGCCATGTTTTGTGGTAGAATGAGAAACTGAGTGGGAGAAAAGTGGAAAGCAAGTGAGACTGAAGTGGCCAAAGTGCTTGTGTTGGTGACCGAAAAGAAGAGCCATCCTATCTGTAGGCAGCCGAGGCAGCCGGGCCCTGAGGATGACTAGCCTGTTCaagcgcagcagcagcaatgGAGGCTCCGGAAGCAGCGGAAGTGGCGGTGGGGGCAGCGGTGGGCAGGGGCAGCTCAACAACAGCAGGTCCAGCCGGCAGGTGCGGCGCCTGGAGTTCAACCAGGCCATGGAAGACTTCAAGACCATGTTCCCCTCCATGGACTATGAGGTGATTGAGTGCGTGCTGCGCTCAAACAACGGAGCGGTGGACGCTACGATTGACCAGCTGCTCCAGATGAGCATTGACGGACAGGGCTCCGATGACAGCTCAGACTCTGATGACAGCATCCCAGCAGAGATTCTGGAGAGAACACTGGAACCTGACAGTTCAGACGAGGAACCACCTCCAGTCTACTCTCCGCCAACATATGATATGCACATTTATGACAGGAAATACCCAGAAGCCCCACCAACACCCCCGCCAAGATTTGAAGCCCAGCCGCCTCCAGGTCACCAGCAGGTCAGAAGCTACCGGAACTGGAATCCTCCTTTGCTCGGAAATCTCCCCGACGATTTTCTGCGGATCCTGCCACAGCAGTTGGACAGCATTAAGCAGAGCTCCCAGAGCAGTCTTTCCCAGCCTTCATCCTCATCGTCTTCCTCCGTTTCTTCAATAAGCCAGTGGACCGCGCCGTCTGGTTCTCTGTCTGGAGCCGCAGGGACCACCGGAGGTCCTGGTTTGACAAGCGGAGCTACCGAGCAAGACAAGAAGCTGAAGCAGTATCTGGAGGACGAGCGCATCGCCCTGTTCCTCCAGAACGAGGAGTTTATGAGAGAACTGCAGCGCAACCGCGAGTTCCTCATCGCCTTGGAGAGAGATCGCTTGAAGTATGAATCAAAGAAATCAAAGTCCAATCATTCATCTAGTATGGAGAATTCCACAGgagAACCGTACTCTGCAGCTTCAATGGAGGCAGTGTCCGATGACGCCCtgttcagagacaaactcaaaCACATGGGCAAATcAACAAGAAAGAAGCTGTTTGAAATTGCCAGAACGTTCTCAGAAAAGACGAAGCGGAGAAAGTCAAAAAGGAGGATGCTCCTGAAGCACCATTCATTGGGCACCGCCAACTCTACAGCCAATCTCCTCGACGATGTAGAGGGAAACCCCTGTGagGATGGTCAGCCCAGAAGAGCAAACACCCAAGAAGAGAGAGAACAACGTAATGAGCCAATAATATGgtgtgaaaccaaaccaaactgaccgagggcaaatcgctccaagtttactACCTCACCAACTTTTTccaagactgtatggctgcagcctggagcgtcccATGTCATGCCGTCCTGTCTCATGCCTTCCCGCCTGGGGCCATCCCCGAccttctacttttcaaaataaaagcttgcgtctcATGCCATCCGGCCGGaataaaatacatattaaaaaTACGTTTTTGCGTCGactatcat
>XM_039785500.1
CGGTCACCAGCTGAATTTAATGGCATAGGGGACAGTATCCTTCTGGTTCCCATTACAAtgccaaaaacaaaaaccacagTCCTTCTGCTCAGCTGTGCTCCTGTGGATATCTGTTTCGATGAACCGTCTGCCCCTCAGTCCGTGCTGATGACTATGGTGTAGCTATGTGGGTTTCCTGACGGATTTTGACTAATCTTTACCTGGTGACCACCTGTCTCATCCCGTCCCTGCTCGCCTGTAATACAGACAGCCATGCCGGATGCAGCTGAATAACGAGTAGcattggggtggggggggaaacAAGTTTTTCTAAACTCCCATCAAAAGGCTGCCATGTTTTGTGGTAGAATGAGAAACTGAGTGGGAGAAAAGTGGAAAGCAAGTGAGACTGAAGTGGCCAAAGTGCTTGTGTTGGTGACCGAAAAGAAGAGCCATCCTATCTGTAGGCAGCCGAGGCAGCCGGGCCCTGAGGATGACTAGCCTGTTCaagcgcagcagcagcaatgGAGGCTCCGGAAGCAGCGGAAGTGGCGGTGGGGGCAGCGGTGGGCAGGGGCAGCTCAACAACAGCAGGTCCAGCCGGCAGGTGCGGCGCCTGGAGTTCAACCAGGCCATGGAAGACTTCAAGACCATGTTCCCCTCCATGGACTATGAGGTGATTGAGTGCGTGCTGCGCTCAAACAACGGAGCGGTGGACGCTACGATTGACCAGCTGCTCCAGATGAGCATTGACGGACAGGGCTCCGATGACAGCTCAGACTCTGATGACAGCATCCCAGCAGAGATTCTGGAGAGAACACTGGAACCTGACAGTTCAGACGAGGAACCACCTCCAGTCTACTCTCCGCCAACATATGATATGCACATTTATGACAGGAAATACCCAGAAGCCCCACCAACACCCCCGCCAAGATTTGAAGCCCAGCCGCCTCCAGGTCACCAGCAGGTCAGAAGCTACCGGAACTGGAATCCTCCTTTGCTCGGAAATCTCCCCGACGATTTTCTGCGGATCCTGCCACAGCAGTTGGACAGCATTAAGAGCTCCCAGAGCAGTCTTTCCCAGCCTTCATCCTCATCGTCTTCCTCCGTTTCTTCAATAAGCCAGTGGACCGCGCCGTCTGGTTCTCTGTCTGGAGCCGCAGGGACCACCGGAGGTCCTGGTTTGACAAGCGGAGCTACCGAGCAAGACAAGAAGCTGAAGCAGTATCTGGAGGACGAGCGCATCGCCCTGTTCCTCCAGAACGAGGAGTTTATGAGAGAACTGCAGCGCAACCGCGAGTTCCTCATCGCCTTGGAGAGAGATCGCTTGAAGTATGAATCAAAGAAATCAAAGTCCAATCATTCATCTAGTATGGAGAATTCCACAGgagAACCGTACTCTGCAGCTTCAATGGAGGCAGTGTCCGATGACGCCCtgttcagagacaaactcaaaCACATGGGCAAATcAACAAGAAAGAAGCTGTTTGAAATTGCCAGAACGTTCTCAGAAAAGACGAAGCGGAGAAAGTCAAAAAGGAGGATGCTCCTGAAGCACCATTCATTGGGCACCGCCAACTCTACAGCCAATCTCCTCGACGATGTAGAGGGAAACCCCTGTGagGATGGTCAGCCCAGAAGAGCAAACACCCAAGAAGAGAGAGAACAACGTAATGAGCCAATAATATGgtgtgaaaccaaaccaaactgaccgagggcaaatcgctccaagtttactACCTCACCAACTTTTTccaagactgtatggctgcagcctggagcgtcccATGTCATGCCGTCCTGTCTCATGCCTTCCCGCCTGGGGCCATCCCCGAccttctacttttcaaaataaaagcttgcgtctcATGCCATCCGGCCGGaataaaatacatattaaaaaTACGTTTTTGCGTCGactatc
>XM_039785509.1
CGGTCACCAGCTGAATTTAATGGCATAGGGGACAGTATCCTTCTGGTTCCCATTACAAtgccaaaaacaaaaaccacagTCCTTCTGCTCAGCTGTGCTCCTGTGGATATCTGTTTCGATGAACCGTCTGCCCCTCAGTCCGTGCTGATGACTATGGTGTAGCTATGTGGGTTTCCTGACGGATTTTGACTAATCTTTACCTGGTGACCACCTGTCTCATCCCGTCCCTGCTCGCCTGTAATACAGACAGCCATGCCGGATGCAGCTGAATAACGAGTAGcattggggtggggggggaaacAAGTTTTTCTAAACTCCCATCAAAAGGCTGCCATGTTTTGTGGTAGAATGAGAAACTGAGTGGGAGAAAAGTGGAAAGCAAGTGAGACTGAAGTGGCCAAAGTGCTTGTGTTGGTGACCGAAAAGAAGAGCCATCCTATCTGTAGGCAGCCGAGGCAGCCGGGCCCTGAGGATGACTAGCCTGTTCaagcgcagcagcagcaatgGAGGCTCCGGAAGCAGCGGAAGTGGCGGTGGGGGCAGCGGTGGGCAGGGGCAGCTCAACAACAGCAGGTCCAGCCGGCAGGTGCGGCGCCTGGAGTTCAACCAGGCCATGGAAGACTTCAAGACCATGTTCCCCTCCATGGACTATGAGGTGATTGAGTGCGTGCTGCGCTCAAACAACGGAGCGGTGGACGCTACGATTGACCAGCTGCTCCAGATGAGCATTGACGGACAGGGCTCCGATGACAGCTCAGACTCTGATGACAGCATCCCAGCAGAGATTCTGGAGAGAACACTGGAACCTGACAGTTCAGACGAGGAACCACCTCCAGTCTACTCTCCGCCAACATATGATATGCACATTTATGACAGGAAATACCCAGAAGCCCCACCAACACCCCCGCCAAGATTTGAAGCCCAGCCGCCTCCAGGTCACCAGCAGGTCAGAAGCTACCGGAACTGGAATCCTCCTTTGCTCGGAAATCTCCCCGACGATTTTCTGCGGATCCTGCCACAGCAGTTGGACAGCATTAAGCAGAGCTCCCAGAGCAGTCTTTCCCAGCCTTCATCCTCATCGTCTTCCTCCGTTTCTTCAATAAGCCAGTGGACCGCGCCGTCTGGTTCTCTGTCTGGAGCCGCAGGGACCACCGGAGGTCCTGGTTTGACAAGCGGAGCTACCGAGCAAGACAAGAAGCTGAAGCAGTATCTGGAGGACGAGCGCATCGCCCTGTTCCTCCAGAACGAGGAGTTTATGAGAGAACTGCAGCGCAACCGCGAGTTCCTCATCGCCTTGGAGAGAGATCGCTTGAAGTATGAATCAAAGAAATCAAAGTCCAATCATTCATCTAGTATGGAGAATTCCACAGgagAACCGTACTCTGCAGCTTCAATGGAGGCAGTGTCCGATGACGCCCtgttcagagacaaactcaaaCACATGGGCAAATcAACAAGAAAGAAGCTGTTTGAAATTGCCAGAACGTTCTCAGAAAAGACGAAGCGGAGAAAGTCAAAAAGGAGGATGCTCCTGAAGCACCATTCATTGGGCACCGCCAACTCTACAGCCAATCTCCTCGACGATGTAGAGGGAAACCCCTGTGagGATGGTCAGCCCAGAAGAGCAAACACCCAAGAAGAGAGAGAACAACGTAATGAGCCAATAATATGATCGCCCTACTCTGCACCATATCAGGGTTACCGTGGCGACGGCAGCATGACCTATGGGTGGCGGCCTTGCAGCTCTTCCTGTCTCCACCtgctcccaccccccaccctaaTCCAAACCAGCCAATGTAAAGGCTCAGCAGTGAGTTGTTTTCCCCCTCCTTCCCAGGGAGAGGAACCGGACTGTACGCAGCACTGGCCCGACTGTCTATAAAAGCATTATCTCTGTATTATAATACTTTTAAtatatcatttaaaatgtaaaggaAATGCATTAGTCCTTCCCAGTATTTAACTGCTTCCTTTTAATCCCCTGAGAGGAACACTAGCGTAGTGATGATCTTGCCATATGAACCTTTTTATTACTTCTCCAGACTGTATGTTTCTGATTGGTGTACCTCAGGCTTGGCATTTCGGATCCAAAGTGTGCACATGCTCCTTTATATACACTAAACCATGAAGAGCT

Function

symbol description
cuedc1 Predicted to enable ubiquitin binding activity.

NR:

description
PREDICTED: CUE domain-containing protein 1 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785495.1 False 1908 mRNA 0.52 11 45821487 45861092
XM_039785500.1 False 1903 mRNA 0.52 11 45821489 45861092
XM_039785509.1 True 2134 mRNA 0.51 11 45815082 45861092

Neighbor

gene id symbol gene type direction distance location
wsb1 wsb1 coding downstream 6660 45784600 ~ 45808422 (-)
LOC120548432 NA coding downstream 47763 45695202 ~ 45767319 (-)
LOC120549281 NA coding downstream 133918 45665380 ~ 45681164 (-)
myo18ab myo18a,LOC101474105 coding downstream 151058 45495537 ~ 45664024 (-)
sez6b NA coding downstream 499215 44987963 ~ 45315867 (-)
akap1b akap1 coding upstream 11131 45872223 ~ 45905007 (-)
exosc5 exosc5 coding upstream 1257305 47118397 ~ 47134701 (-)
psmd8 psmd8,LOC102787089 coding upstream 1282649 47143741 ~ 47150610 (-)
ehd2b ehd2 coding upstream 1296953 47158045 ~ 47170349 (-)
bicra gltscr1 coding upstream 1311135 47172227 ~ 47188363 (-)
LOC120552149 NA non-coding downstream 39885 45774212 ~ 45775197 (-)
G24037 NA non-coding downstream 344779 45469859 ~ 45470303 (-)
G24036 NA non-coding downstream 346697 45468162 ~ 45468385 (-)
G23996 NA non-coding downstream 476210 45338506 ~ 45338872 (-)
G23990 NA non-coding downstream 484084 45330732 ~ 45330998 (-)
G24264 NA non-coding upstream 323427 46184519 ~ 46184757 (-)
G24272 NA non-coding upstream 475254 46336346 ~ 46336574 (-)
G24276 NA non-coding upstream 551483 46412575 ~ 46412774 (-)
G24277 NA non-coding upstream 567246 46428338 ~ 46428545 (-)
G24284 NA non-coding upstream 644374 46505466 ~ 46507080 (-)
mrps23 mrps23 other downstream 990089 44816628 ~ 44824993 (-)
smco4 NA other downstream 2025647 43770066 ~ 43789435 (-)
LOC120553425 NA other downstream 2098341 43700971 ~ 43716741 (-)
LOC120574039 nlk,nlk2 other downstream 2468409 43236682 ~ 43346673 (-)
cntn5 NA other downstream 3648045 42029673 ~ 42167037 (-)
bet1l bet1l other upstream 1273762 47134854 ~ 47142596 (-)
dhx34 dhx34,LOC102778731 other upstream 1434462 47295554 ~ 47325453 (-)
nectin1b nectin1,LOC102782356 other upstream 2296261 48157353 ~ 48398620 (-)

Expression


Co-expression Network