bbc3


Basic Information

Item Value
gene id bbc3
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 13287879 ~ 13305829 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785781.1
AACCGCTCAGACTGACTTCAGCCCGGACAGAGAAGAGCACCGACGAGAAGCTGCTCCGTACGTGATTCGGTACATCTCGCCCGTATTTTAGTTTTGATGGGTTAATCTAGCAGAAAAGCAAACTGAATATTAACTGAAACAATCCAAACCTGGAAACTGGAAATGGAATGACACATTTTCACCGGAGTGGACTTTTACATCTTGTAGATCCTTCGCCGGTTGTTTAGGCACATTTTATCCCCTCTGATGTCCACCTGCTACGGCCGGTTTCTGACCTGCAGACAGCCTCACCACGGAGCGTCAGATAGACCAAACTACTACTGAGATGGCCCGTGCCGAGACCATCGAGAATGTCGGGGAAACTGGAGGAAGCGGAGGAAACGGCCCTCTTCCTAGCCACAGCACCTGCCGCATGGAGCTGCCTCGCCCGTTCTACAACTGGCCCGGCCTGCTCACCGCTACCAGCACCTCCACCGGCTCTGGGACTGGCACCGGTTCCAGACACCTCTACCATAACCACCACCATTTGCACCCTCTGCAGGCTCTCTACCTGTCTTACCCACTGGCTTATCGCCGCCCAGAGGGCCGTGGCGAGCCCCAGACTCACCAGCAGTTACCTGCGTTATCGCCATCACCAGAGCCTCCGCGCTCGCCACTCTGCAATCGGAGGGAAGGGAGGAGCGGAGGCGCAGTTGCACCCAGTGCCTTCTCAGGAGAGCAGTCGGAATCGTACAGAGAGGAACGCCAGGAGGCCTCCAGCCGGCAGGGACCTCTGCCAGACCTGCTGCCCCAGAATGAGCACCCATCCTGGGCTTCCCCACATCACAGAGCCCCCAGAGGAGAGGCAGTGCAGGACCTGGAGGTCAGGAGAGTGGCCAACCAGCTGAGGGCCATTGGAGATGAATTTAACGCCACAGTCCTCCTCAGAGCGcACGCCGCCCCCCACTGGCAGGACTGGAGAGACGCTTGCCGAGGACTCCTCAACTTCATCGCCCAGACTCTCAGCACTCTCTACAGGCTCACTTAGAGAGACGGAGAGCCGCCTCACCTGCGCGTAACCGGATACCTTGGCGACTTTATACATTCAGGACTTGGCCACGGACCATCGGACTGTGGCTAGTGAACGGAAAACAACCCCGCCTGGTTGCTGCACTGAACCCGGAggattcaaaagaaaaaaatctggaACAAAGAATTAAGTGAGGACTAGATCAGCAGCTGGAGGTGTCGGCGCCGCCTGTGGGCTGGATCGGGGAGCTACCTGTGGAAACTGgaccctgcctgtctgtctgcctgtctgtctgcctgaaAGTCCCGTCCGTCCTTCAGTCGGTCTGCTGGTACAGACTGCAGCTGACGGACCGACGGTCGCTTTCCTACCTGTATATTTTGTAAAAACCACTTGCTTTCGCTGTCTTTGTCTCGGGGCTTGTCTctcagtcagtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgcacatggcAGACGTGGGTCAGATGAACATGTCGTATATCGTTAGATATCAGTGCAAAAAAAGCTTTCATCCATTTTGGAAAATCGCCTACAGATATTTCAGAATTGGGCTTTCAAAACCACAGATGAGTCTGATTGTAAGTGACCTGTTTTTGGAAGTGAAGGTCTTCATTATCTTGTGGAGCTTTTTCATTTAGCTTTAACATCAGCCACCATTTTTCTGGAGGCAATTTTTGAAATAGATGATATCTCTTTAATTCTTCCCTTTGAtgatgcaaaaaacaaaaaacaaaaaaaaaacttgattttGATTTGACCCCCATCTGACGTGTGTGTATTACTGTTGTGTCTTTATTTTGCCCCTTAATTCTTATAAACTGTGAAACTGGAGTCTGTGCGTTTTGCATCGCAGGGGACAAAAAAAGTCGGGTGTTATTCCACAGAGGGAACCTCTCTCCCAATCTGAGACTCCTTCACTTCATCATACAACGTGCCTTTCTGCTCAGTGCTCCGTTGAGTCCTAATCTCCAAAAACTAGGAcaatcacccacacacacacacacacacacacttcaagtGCTTTGTTTGCAAGTGGTATTTGCATTAGCAAATGCTCCAGCGTCAGCACGGTTTAAGGTCCTTTAAGGACAGAAattgaaaaaaggaaattattataaattataaaaatgagAAATGAGTGAGAACGGAGAAATGAGAGTGAAATTGGATGAAGGAGGACTGATAATAATTCTAAATTACATAGCTTAATCTCCGCCACACATTTTGCCATTGTACATTCCCCCCGTTCGTACTGCCAGTGTTGGGAGCTGGCAGCGTCTCACCCGCCCGCCTGTGTCGACAGTGTTTAGAGTTACTTGACTGCTTGTAAATATTCTTTTGGAAGATGAATCTGATCTAATTCAAATTGTTTTTGATGGACTTTAAAAGTACTTATGAAAGCGAGAGAGTTCACTGTGTTTGGgagatctttttttgtttttctgagcAGCCATTGGCGACAGTAGAGCGGGTTTGAATTTAAATCCAGTGGATTTGAGATGGTATTCAATGagttaaagaaaaatatataattcGGATTTTTCTGATTGTTGAAAAGTATTTCATGATgttttgtaaaaagaaattaCCCTTTCGATTATTTTCACTGTAGTAGGAGAATATGTTCAATTGCTCATATTAAGAGCAATATTTATCTTTGGAATGTAGCCTGAAtctgtagctttttttttacgttaatgtattatttatttttgtcttacATTCCtgatcaaaactatgaattaaGCTGTACTTGATTTGCAACTGTTAAAACAGAGATTTGATTTAAACAAAATGGGAGCTAAAGCTGTTAAAATACACATTGGAAGTGGATACATCAGTTTGAAAAGCAgaacaaacaaagcaaaattaaaatgtcagcCTAGAAATTGGTACCTTTTTTTTCCCATGTgcttgagataaaaaaaaaaatctatcattTAAAACGGTACTATGTTTTAAAGCAATGCTCATAATATTATTTACAACGTTTCTGGCCTCACTCACATCTTGTTTTTGGGGAAACAAGATGTGAGTGTATAACAGGAAGCCACAAACCTCTCCAGACACCAAAAGTGAAGTATTGGCTTTCCATGTGTATATCAGATGCAAAAGTACCCAAATTCCCCTATTATTATACTCTTTAAagcacaaagaagaaaaaaatctgacAGTTAGCAATACTCTAAACTAAACTGTAAGTCCCGGTCATTGAAAATCAACAGGGTATTTCGGATGCAAATTGAATTCCAAACTGTTTGCTACTGGTGCTAAACACGCTTAAAGTCATGTACTGTAACGTACTTTTGATTAAAGTGACCACTTGGTGGAGCATTAAAATTTTATTTCAGGAAATATTTGACTGAAACATGGACACTTGCTGATCTATTCCACTTAAAATGCCTCAAACATTCAACAGGGATTGGCTGTTTTATGTTCCCACTCTCACTTGGCCTTAGCCACACTGTTTTATGTGTTTGTAGCagggcttttttctttttgcatttctGAAAGCCTTGATGTATAAAGTCCTAATAATACCTGCAGACGTTCAGCTAACATGACGCTTACAGAGTACAAACTACGCTAGCAGCAGTAGACACTTGTTAACTGCttgcatattcatattttaagaTCAGTTTGCTAGCAGTGCTTTTAGCCATGCTTGCTGTCATCGCATAGTAATGTTATGTGGCCCTGGTTCAGGGCTCGCCTCCCTCCCACCAACGATGCTCAGTGTCAGTCACATGCAGTTGCTGTTTGTCAACTTTTTTCTATTGTCAACTTTCTACATgaattttgtacttttttttcttctattttataCAATAAAGATAAGGAGAACTACA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107743728

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785781.1 True 3886 mRNA 0.44 4 13287879 13305829

Neighbor

gene id symbol gene type direction distance location
zmp:0000000529 LOC102308420,LOC102195538,LOC105930185,LOC107092488,LOC101077945 coding upstream 188341 13088907 ~ 13099538 (+)
LOC120551276 LOC101468279,LOC102195252,LOC100709375 coding upstream 200507 13041188 ~ 13087372 (+)
trnak-uuu_4 NA coding upstream 284472 13003335 ~ 13003407 (+)
trnak-uuu_2 NA coding upstream 290011 12997796 ~ 12997868 (+)
LOC120554572 NA coding upstream 664892 12622797 ~ 12622987 (+)
zgc:154093 NA coding downstream 78371 13384200 ~ 13395559 (+)
ercc2 ercc2 coding downstream 95816 13401645 ~ 13417034 (+)
ckmb ckm,LOC104935593,LOC107094873 coding downstream 153143 13458972 ~ 13464796 (+)
si:dkey-182i3.11 NA coding downstream 231362 13537191 ~ 13541026 (+)
blvrb blvrb coding downstream 394163 13699992 ~ 13708027 (+)
G16717 NA non-coding upstream 14492 13272974 ~ 13273387 (+)
G16641 NA non-coding upstream 48921 13237006 ~ 13238958 (+)
G16627 NA non-coding upstream 59855 13220436 ~ 13228024 (+)
G16628 NA non-coding upstream 111506 13175700 ~ 13176373 (+)
G16626 NA non-coding upstream 116351 13170494 ~ 13171528 (+)
G16726 NA non-coding downstream 90775 13396604 ~ 13398177 (+)
G16759 NA non-coding downstream 111444 13417273 ~ 13418264 (+)
G16790 NA non-coding downstream 256262 13562091 ~ 13649236 (+)
G16792 NA non-coding downstream 261815 13567644 ~ 13591374 (+)
G16824 NA non-coding downstream 435712 13741541 ~ 13851363 (+)
hif1al NA other upstream 150845 13107862 ~ 13137034 (+)
G16590 actn4,LOC102210441 other upstream 365410 12868830 ~ 12922469 (+)
LOC120554522 NA other upstream 657015 12630674 ~ 12630864 (+)
LOC120552034 LOC104947607 other upstream 831296 12442130 ~ 12456583 (+)
G16467 clns1a,LOC102781126 other upstream 878605 12395995 ~ 12409274 (+)
zc3h4 NA other downstream 34671 13340500 ~ 13359989 (+)
G16788 LOC103364096,LOC103373880 other downstream 250450 13556279 ~ 13562415 (+)
G16981 LOC104952532,LOC103377862,LOC106581065,LOC106612819 other downstream 1130218 14436047 ~ 14441693 (+)
LOC120547056 axl other downstream 1302769 14608598 ~ 14638950 (+)
rasgrp4 hnrnpul1,LOC104955748,LOC103368736,LOC102790390 other downstream 1431273 14737102 ~ 14760824 (+)

Expression


Co-expression Network