LOC120549238


Basic Information

Item Value
gene id LOC120549238
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 16592319 ~ 16596088 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785973.1
atggaTCACAGCAGAACTGAGGGAGGCCTCCTCTCCTGAGAACTTGCTAAGAAGAGGGAGGTCATCCTGATGTTGGGTACAGAGTCTGGAGCCTATGAAGAGGGCCAAATATCACAGTATGTCTCAAACTGGTGATGTGAGCATGGAGCCTCTGAAATGGCCAATAGCTCCAGATGGCTACATCCCCAACTCTGTCATCCGAAActggaggaagaagagaaaggaTCTTAACAATGTGTACTGTTTTGATGACTTTTATAGTTCTCATCAGGTGAATAAATGCACAGCAAATGATGAGGAACATGTGAGCACAAGAGTTTTCTGGATCATACAAgatgatgaggaagaggaagaaaagacagATGATGTGAAATGGAGAACGGGCGAAAAGGAAGATGAGAAAAATGAGAAAGCCAAGAAGGAAAAAACAAAGGTGCAGGAAAAGGAAAGGGTGGatgagaagaaagagaaggaagaacACAAGATGGAAAGATATGTCCTGACGCAGATAAACACTAACACTACTCTGCAGAACCAGCTGAAAACATTTGATGACGGACAAATGAATTTGGAGCCTCAAAGGCAAGAAGTCCACTCAACATTTAATCCAAGAAAGACTGTGAACTTCCTacCAACCATCTGTCCTAAACATGGACCTAAACAACTCAGAGAGCAAACAAAGCTTCATGAAACCATCACACCTCCCCTCCAGTCGGGCACAGAGAGATACTCTGTGTCCGATAAACAAAGAACATCCAGTTTAATTCCTAAAGAGTGGCCGGAGCCTCCATTGGAAAGTCCTGTGGTGTCTGTAGATGCTGTCATCCCAAAGCAAGAACCCAGAACCTCGTGCATACCACCTACAAAGCCCGAAAACATGACTCCTTATCCCCTGAAGGCTCCTCCTTCAACCCCAGAGGATCATCAACCCCAACTAGACCTTTGGCCTCCTAAATGCTCGCCAATGAAgcgagagataaagagagataaAGGGTTCCTCCTGTCTTCGACCAAATATAACAACATCAGAGACCAACTACAGGTAACCCTTGATCAAAAAGTCTTGAAGCTTTATAAAAAATTGAAAGCTGGCACCAAGAACTCGTCACGCCTTGGAAAACACTCCACCATTACTGAGCACCCAGCTACTTCTAAGGCTATGCAGGCTCGCAAAGGCTTCTGTCCTCCTGCTGATTCTAAGGCTATACACACTCTCCAAGACTTCTGTTCTCCATGGGTAGCACAGTTGGCCGCTAGAGAGCATCCAGTCAAGTCTTCCAATGCCAGACAACTTGCGGCAACCATCCCAGCAACAGGACATCAGAGATTGGTGCAAAAGATCCAGATGAAAGACACTCTAGAACCAGCATCCTTTCACTTCCACCATGTGATCCCAATGTACTCCCAACAGAGCTTCTTTACTTTGAATCCATCTGGGACGACCCAGTACGGAAGGCTGCAGTTTCACTGGATAAGGGGACATGATATAGGTGGCTTTGTTCCATCTTTATAGATCGACTTAGCAACTGGCCAGCTCTTGAATTATTTCATAATGAGGTATCTGGCTGAACAATAAAATCATCTGTTGCATTAATACAATAATTTAGGTTCAAACTATGGTAATGGTGATGTTAGTTGGTTGGTCTTTGGTCCAGACTAACATTTCTCAACAAATTTTGTACAAACATTCATGATCCCAAGAAAATGAACCCTACTAAATTTAGACATAGGCCTACCCTTACTTTTCCTCATGACCATGTCACAACTGTCCAGTCACCATCAATTCATGTCATTGGTTCCTAGGCATTGTATCCTAATAATTTTGGTGACACCTAGCGCCACcagcaggttgacatttgtggttgaAATGTCTCAAAAACTATCGGATGCTTTGCAATTTCATTCATGTCCCCCCAAATTAATTTTAACAACTTTCTTAATTGCCTGTTGATTCTTTTAGTCGTTAGTTTGTTGTAAGTATGAACTGATATTTTGTGGTGTTAATCAACTGCAACAAGTGTCTGAGCTGTCTGTTGATATATGATTAATAACAATACATAGGACAAAAAACATGGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785973.1 True 2078 mRNA 0.43 5 16592319 16596088

Neighbor

gene id symbol gene type direction distance location
arcn1b arcn1,LOC103368493 coding downstream 12665 16564562 ~ 16579654 (-)
phldb1b phldb1 coding downstream 32251 16441097 ~ 16560068 (-)
atf5b LOC103356433,LOC104926458,LOC104965607 coding downstream 206251 16381343 ~ 16386068 (-)
LOC120553834 NA coding downstream 255694 16319497 ~ 16336625 (-)
LOC120547208 adamts15 coding downstream 383343 16190131 ~ 16208976 (-)
ubash3bb ubash3b,LOC104926453 coding upstream 3706 16599794 ~ 16643883 (-)
LOC120548132 LOC104926451,LOC103375127,LOC106906251,LOC103154322 coding upstream 48032 16644120 ~ 16655340 (-)
usf1 usf1 coding upstream 59402 16655490 ~ 16664682 (-)
LOC120551331 NA coding upstream 351668 16947756 ~ 16949836 (-)
gemin4 NA coding upstream 559604 17155692 ~ 17162704 (-)
G17499 NA non-coding downstream 173577 16417295 ~ 16418742 (-)
G17466 NA non-coding downstream 191483 16400623 ~ 16400836 (-)
G17389 NA non-coding downstream 544303 16016922 ~ 16048016 (-)
LOC120549843 NA non-coding downstream 878230 15713132 ~ 15714089 (-)
G17264 NA non-coding downstream 949329 15642003 ~ 15642990 (-)
G17571 NA non-coding upstream 100725 16696813 ~ 16698009 (-)
G17579 NA non-coding upstream 114681 16710769 ~ 16766469 (-)
G17583 NA non-coding upstream 124130 16720218 ~ 16935713 (-)
G17587 NA non-coding upstream 125486 16721574 ~ 16755316 (-)
G17588 NA non-coding upstream 127319 16723407 ~ 16739776 (-)
sdhdb sdhd other downstream 531911 16046008 ~ 16060408 (-)
G17287 NA other downstream 873278 15695554 ~ 15719041 (-)
lyrm9 lyrm9 other downstream 941272 15646641 ~ 15651047 (-)
si:ch1073-145m9.1 LOC104930674,LOC104957430,LOC102079100,LOC108239365,LOC105418711 other downstream 1266520 15318840 ~ 15325799 (-)
caln1 caln1,LOC103372560,LOC107097061 other downstream 2269486 14247928 ~ 14322833 (-)
G17597 NA other upstream 252073 16848161 ~ 16930994 (-)
xaf1 LOC107094331 other upstream 876859 17472947 ~ 17478903 (-)
LOC120552194 NA other upstream 1203911 17799999 ~ 17890661 (-)
zgc:165508 fam131a,LOC102799247 other upstream 1531378 18127466 ~ 18151968 (-)
LOC120545639 eif4g1 other upstream 1582925 18179013 ~ 18222893 (-)

Expression


Co-expression Network