LOC120549306


Basic Information

Item Value
gene id LOC120549306
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 786680 ~ 789067 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039786134.1
ATGGATGATCTTAACTCCACCCACTTCCTGGCCACCAACCAATCAGATCTGAGCAGCCCGTTCACGCGGCTGGTGCTGCCGCCTCTCTACCTGCTGATCTGCGTGGTGGGCGCGTCCCTGAACGGCGTGGCCGCCTGGATCTTCTTCCGAGTGCCGAGCGACTCGGGCCTGGTGGTCTACCTGAAGAACATGATGGTGGCCGACCTGCTGATGCTCGCCACCTTCCCCTTCCGGGTGGCGGCGCAGCTGGGCGTGGGCGGCTGGCGCCTGCACGTGGTCATGTGCCGCTACACTGCCGTGCTGTTCTACTCCTCCATGTACGTGGGGATCCTGTTCATGGGGCTGATCAGCCTCGAGCGCTACGTCAAGATCGTGAGACAGACCTCGCACTCAAACGCTACGGTCGCCGCTTCGCCGTCCTGCAGGTCCAGGTTTGGCGTTGGATCCTTGCTGCATCTCCTGCACAGCGTCGGCTTTGCCCGTGTGTTGGCGCTGCTCACCTGGAGCTTCCTCCTTCTCTGCGTACTGCCCAACGTGGTGCTGACCAGCCGGCCGGCTACCGAGGAGACCTCGCGGGACTGCATGCGCCTGAAGACGCCGCTGGGCGTGCAGTGGCACAGCGTGTCCACCTTCCTGAGCGTCAGCCTGTTCTGGGTGACCCTGCTGGTCCTCGCCTACTGCTACACCTCCATCGCCTGCCGCGTCTACCAATCGTATCGCCGCGTTCGCcgtagcagcaacaacagcagcaacgaGGCGTGCCGGAAGTCCAACCGCAGCATCTTCAGCATCCTGGCGGTGTTCTTCGTCTGCTTCGTGCCGTACCACGTGTGCCGCGTGCCGTACACGCTGAGCCAGATGCCGGCGGCGTCGGGCTTCGGCCGGGACGCGCGGTTCCTGCTGTTCCAGCTGAAGGAGGGAACGCTGTTCCTGTCGGCGCTCAACGTCTGCCTGGACCCCGTCATCTACTTCCTGATGTGCCGAACCTTCAAAGAGTCGCTGCTCAGGAAACTGTCGGGGAGAGACCACCGGAGGAGGGCGGGCTCGCTGACCACGGGACAGAGTCTGAGTCACATttagagagagggaggcaggggaCAAGGAGAGGAGATAAGGAGAGGAGGGAACTACA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K08389 GPR87; G protein-coupled receptor 87

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039786134.1 True 1132 mRNA 0.63 2 786680 789067

Neighbor

gene id symbol gene type direction distance location
LOC120573127 NA coding downstream 8013 766889 ~ 778667 (-)
plekhg2 plekhg2,LOC103150908 coding downstream 72985 473553 ~ 713695 (-)
LOC120573248 NA coding downstream 210854 570527 ~ 575826 (-)
il15l NA coding downstream 325336 409173 ~ 461344 (-)
chp2 LOC108241578,LOC107097862,LOC105915343 coding downstream 590391 186389 ~ 196289 (-)
LOC120570713 NA coding upstream 59603 848670 ~ 1413931 (-)
LOC120571318 NA coding upstream 113280 902347 ~ 952303 (-)
LOC120571420 NA coding upstream 151117 940184 ~ 950453 (-)
LOC120570742 NA coding upstream 224153 1013220 ~ 1353897 (-)
LOC120572169 NA coding upstream 308270 1097337 ~ 1128067 (-)
G13235 NA non-coding downstream 20691 765748 ~ 765989 (-)
G13233 NA non-coding downstream 26342 760079 ~ 760338 (-)
G13232 NA non-coding downstream 26962 758973 ~ 759718 (-)
G13230 NA non-coding downstream 52317 733968 ~ 734363 (-)
LOC120570540 NA non-coding downstream 67422 718249 ~ 719258 (-)
G13576 NA non-coding upstream 88160 877227 ~ 882012 (-)
LOC120571774 NA non-coding upstream 200784 989851 ~ 991035 (-)
G13621 NA non-coding upstream 236971 1026038 ~ 1026411 (-)
G13664 NA non-coding upstream 472967 1262034 ~ 1298976 (-)
G13654 NA non-coding upstream 540632 1329699 ~ 1480649 (-)
si:ch211-137a8.2 NA other downstream 36177 740452 ~ 750503 (-)
G13228 NA other downstream 50138 733268 ~ 736542 (-)
G13195 triap1 other downstream 399296 386401 ~ 387384 (-)
supt5h supt5h other downstream 402492 310607 ~ 384188 (-)
G13128 NA other downstream 461481 309150 ~ 325199 (-)
LOC120571545 NA other upstream 180581 969648 ~ 977738 (-)
G13587 NA other upstream 338824 1127891 ~ 1197686 (-)
LOC120571038 NA other upstream 377531 1166598 ~ 1197743 (-)
G13651 NA other upstream 513829 1302896 ~ 1381721 (-)
G13995 iws1 other upstream 2191994 2981061 ~ 2984498 (-)

Expression


Co-expression Network