Gene
RNA
| Item | Value |
|---|---|
| gene id | rps3 |
| gene name | rps3,LOC102795110 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 11554652 ~ 11562928 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| rps3 | Predicted to be a structural constituent of ribosome. Acts upstream of or within chordate embryonic development and erythrocyte differentiation. Predicted to be located in mitochondrial inner membrane; ribosome; and spindle. Predicted to be part of cytosolic small ribosomal subunit. Predicted to be active in nucleus. Orthologous to human RPS3 (ribosomal protein S3). |
| description |
|---|
| 40S ribosomal protein S3 |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0015935 | small ribosomal subunit | cellular_component |
| GO:0003723 | RNA binding | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02985 | RP-S3e, RPS3; small subunit ribosomal protein S3e |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039786653.1 | True | 896 | mRNA | 0.57 | 7 | 11554652 | 11562928 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120553334 | NA | coding | upstream | 13833 | 11535785 ~ 11540819 (+) |
| LOC120551226 | NA | coding | upstream | 575223 | 10977205 ~ 10979429 (+) |
| LOC120551211 | NA | coding | upstream | 1090299 | 10455757 ~ 10464353 (+) |
| LOC120547173 | NA | coding | upstream | 1109163 | 10434485 ~ 10445489 (+) |
| LOC120548947 | LOC103372137,LOC102304476 | coding | upstream | 1129882 | 10405189 ~ 10424770 (+) |
| kctd14 | kctd14 | coding | downstream | 2333 | 11565261 ~ 11573226 (+) |
| LOC120550095 | NA | coding | downstream | 17518 | 11580446 ~ 11587261 (+) |
| LOC120550461 | NA | coding | downstream | 29500 | 11592428 ~ 11613222 (+) |
| ompa | omp,LOC102310369,LOC101166404,LOC105930201,LOC106535736 | coding | downstream | 266884 | 11829812 ~ 11833364 (+) |
| LOC120551249 | NA | coding | downstream | 309000 | 11871928 ~ 11883024 (+) |
| G16207 | NA | non-coding | upstream | 19351 | 11535088 ~ 11535301 (+) |
| LOC120572352 | NA | non-coding | upstream | 68582 | 11484612 ~ 11486070 (+) |
| LOC120552116 | NA | non-coding | upstream | 112393 | 11427476 ~ 11442259 (+) |
| G16192 | NA | non-coding | upstream | 135771 | 11418614 ~ 11418881 (+) |
| G16190 | NA | non-coding | upstream | 208296 | 11346015 ~ 11346356 (+) |
| G16229 | NA | non-coding | downstream | 126292 | 11689220 ~ 11771683 (+) |
| G16235 | NA | non-coding | downstream | 171470 | 11734398 ~ 11752981 (+) |
| G16237 | NA | non-coding | downstream | 191446 | 11754374 ~ 11812385 (+) |
| G16250 | NA | non-coding | downstream | 255952 | 11818880 ~ 11819272 (+) |
| G16261 | NA | non-coding | downstream | 293423 | 11856351 ~ 11890247 (+) |
| zgc:101731 | LOC106580895,LOC100194580,LOC103372138 | other | upstream | 1049314 | 10388232 ~ 10505338 (+) |
| G15712 | NA | other | upstream | 1551057 | 10002250 ~ 10003595 (+) |
| LOC120551195 | NA | other | upstream | 1551280 | 9866710 ~ 10003372 (+) |
| G15642 | NA | other | upstream | 1886173 | 9645137 ~ 9668479 (+) |
| LOC120551159 | fam13c | other | upstream | 1901821 | 9631391 ~ 9652831 (+) |
| G16267 | NA | other | downstream | 331576 | 11894504 ~ 11900873 (+) |
| G16467 | clns1a,LOC102781126 | other | downstream | 833067 | 12395995 ~ 12409274 (+) |
| LOC120552034 | LOC104947607 | other | downstream | 879202 | 12442130 ~ 12456583 (+) |
| LOC120554522 | NA | other | downstream | 1067746 | 12630674 ~ 12630864 (+) |
| G16590 | actn4,LOC102210441 | other | downstream | 1305902 | 12868830 ~ 12922469 (+) |
