LOC120550095


Basic Information

Item Value
gene id LOC120550095
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 11580446 ~ 11587261 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039787137.1
TTCAGTGTAACACAGGAAATGAAGACTGAAGTCTTCTAGAAAGtcagcagcagcaccagcagcagagagacGCACAGAGCTTGCTGAAGCGCTGACACCTCCGACATGACGGGCAGAAAAAACCTGATGAGAGTTCTGCTGCTCGCCAGTCTGCTTCTCCCAGGTGTGCGGTGCGTAAAGGACGCAGTGTTTGTGTACAGCAGACTGGGAGGCGTTGCTCTGCTGCCGTGTGTCAACCAGCTTTCCTCAGACTGCTCTGGGATCAGCTGGACCTTCTACAAGGGCGGCCGCTACACCGAGGAGGTCAGCGGGGGGCAGGTGAGCGCGGGCTCGGACAAGGCCAGCCGCATGTCCATCGAACCCAACTGCTCGATCAGCCTCCGCGGCCTCATCGTGGAAGACGCCGGCTCCTACCACTGCCTGCAGCACGGAAAAAACATCGCTGACGTTTACCTGTCTCTCCTCACCATCACCTCCGTCTCCACCTTCACCGACCTGCAGCCTGGAGGAAACCTCACCCTGAGCTGCATCCTCTTCACCTACTATGACGTTGGGAGCTGCAAGTCATACTCCAGCGGGTTCAACCTCAGCTGGGTGGCTGAGGACGGTACCACGCTGCCCAAAGACACCAGGTCCGAGCAGATTATCCTCACTCGCTGCAACATCACGCTGGTCATTAAACTCCGGAGGGAcgacaacaacaggaagtggAGGTGTCAGGTGAACACCGGAGAAAACCGCGCGGCTGAGTTTCTGTACTTCACTTCCACCTTTTTGTTCCAAGATCCTCCCACCGCCCAGAATCTGATTCCTTCTTCACCCACCATAGACTGTCCCGTCGAGCTGCCCATCAGCCGCATCGTGCTCTGTGTGGCTCTGCCCGTCATGGTGCTCATAGTGGGATTCTTCACCTGGAGAGGAGACCGCAAGAGGGCAAAAACGTATGCAGCTTGCATCGAGCTGCAGGAAATTAACTGATTTGTTGATCACTTTGTCTGTTGCtgggtttttttcttcatatttttgtcttttttgtatcTAAATATAAGCAACTCTATTCAAAAGTGACTTTTTTATGTTGTTAGGGATTTCCTCCTCTCAATGTGCCTGACTCCAAATAAAAGACCTATATACCCCCGCGCATTCGTTAAATTGGAATTACATAGATCCTAAGCAAGAGCCAAATAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039787137.1 True 1190 mRNA 0.53 3 11580446 11587261

Neighbor

gene id symbol gene type direction distance location
kctd14 kctd14 coding upstream 7220 11565261 ~ 11573226 (+)
rps3 rps3,LOC102795110 coding upstream 17518 11554652 ~ 11562928 (+)
LOC120554420 NA coding upstream 18042 11562256 ~ 11562404 (+)
LOC120554427 NA coding upstream 19907 11560391 ~ 11560539 (+)
LOC120554442 NA coding upstream 22846 11557452 ~ 11557600 (+)
LOC120550461 NA coding downstream 5167 11592428 ~ 11613222 (+)
ompa omp,LOC102310369,LOC101166404,LOC105930201,LOC106535736 coding downstream 242551 11829812 ~ 11833364 (+)
LOC120551249 NA coding downstream 284667 11871928 ~ 11883024 (+)
LOC120550284 LOC106522765 coding downstream 370635 11957896 ~ 11973180 (+)
LOC120550300 LOC107727921,LOC103377937,LOC107661103,LOC100710678,LOC101484592 coding downstream 423415 12010676 ~ 12031804 (+)
G16207 NA non-coding upstream 45145 11535088 ~ 11535301 (+)
LOC120572352 NA non-coding upstream 94376 11484612 ~ 11486070 (+)
LOC120552116 NA non-coding upstream 138187 11427476 ~ 11442259 (+)
G16192 NA non-coding upstream 161565 11418614 ~ 11418881 (+)
G16190 NA non-coding upstream 234090 11346015 ~ 11346356 (+)
G16229 NA non-coding downstream 101959 11689220 ~ 11771683 (+)
G16235 NA non-coding downstream 147137 11734398 ~ 11752981 (+)
G16237 NA non-coding downstream 167113 11754374 ~ 11812385 (+)
G16250 NA non-coding downstream 231619 11818880 ~ 11819272 (+)
G16261 NA non-coding downstream 269090 11856351 ~ 11890247 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 1075108 10388232 ~ 10505338 (+)
G15712 NA other upstream 1576851 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 1577074 9866710 ~ 10003372 (+)
G15642 NA other upstream 1911967 9645137 ~ 9668479 (+)
LOC120551159 fam13c other upstream 1927615 9631391 ~ 9652831 (+)
G16267 NA other downstream 307243 11894504 ~ 11900873 (+)
G16467 clns1a,LOC102781126 other downstream 808734 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 854869 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 1043413 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 1281569 12868830 ~ 12922469 (+)

Expression


Co-expression Network