LOC120550122


Basic Information

Item Value
gene id LOC120550122
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 12218910 ~ 12235751 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039787138.1
CAGGTGATCTGAATTGTCATCATGACCCGGGATATATACCGATGTAGACGGGCTCGGTCAGAACTTCCTAAAGGAGCGTCGAGCCCCCGATCAGACAACTCAGCCCAACCGTGGTAGGTGGTCTGAAAGAGTCATGGGTCGTCCTGGGATTCAGATGTGGACATGGAAGCTGTGTGTCTTCTTGAGCTGGATGTGCGTGGGCCAGGCGGCGGCAGGACCGCAGTACATGGTAGCCATTCCTGCAATTCTTGAATCTGGCGCTGAGACCAGATTCTGTGCCAGTCTCCTGGAGCCCAGCGAGACTCTGGAAATGAGCGTCACTCTGATGTCCCAAGAGGCGAATACAACCCTTCTGGAGAAGACGTCCAGTGTAGAATTTCATACCTGCATTGACTTTAAGGTTCCTTTAGTGCAGGATGAAGTGGTGCAGGACTTTGAGGTGGAGGTACGAGGCGACACGTTCTACTCTAAAGAAGTCCGAAAAGTTAAGATCAAAGTCTATCGACCAATGACCTTCATCCAAACGGATAAACCAATCTACCTTCCAGGACAAACGGTGCATTTCAGAGTCCTCACACTGGATACCAAGTTAAGACCTGTCCATCAGCTGTACGATGTAATCGAAATAGAGGATTCTAACAGCAACAGGATTGGCCAGTGGCTGAATGAAACCTCCTCCAATAGGAAGATATTGCAGCTTTCTTACGCCTTGAACTCTGAGGCCCGTGAAGGAGCTTACCAAGTTACTGTGTCAATTGGGTCTGAAAAAATCCAACACAGCTTCAAGGTGGAAAAATACgTTTTGCCTAAATTTGACCTACAAATGAATGCACCTGATGAAGTAAGCATTAATCAGGAAGAAGTCAAAGCTGAAGTCTGTGCAACGTATACATACGGACAGCCTGTGCCAGGCAGTGTTGACTTGAAGGTGTGCCGACCTTTTGATCCCTATGTTATACCCCGTGCAATCACCCCTGAACATCCAGAGGGAGTCTCTGTAATCCCGATGCCTTGCTACGAGGAGACAAAGCAGACGGACAAGAGAGGCTGTGCCACTTTCAGCTTCACAATGTCAACTTTCACAAGAATTGCGCAGGAGGCGCTGCAAGATGTACTGCAACTCAGTGCAAATATGGAAGAGGAGGGGACAGGTATTTCACGCTCCCAAGAGAAGACTACGGGCATTTCTTATGTTGTTGGAAAGCTGTCTTTCACCGACACTCCCCAGACTTATAACAAAGGATCAAATGTGGAAGGAGAAGTTAAAGCGGTTTATTACAATAATACAGCCATTCCTGACATGCCGGTGTTCCTGTTTGAGGGTGAAAGGTGGTCATCGCGTTGGTTACAGAATCTCACAACCGACGGTGATGGTGTCGCCGCTTTCTCATTGAGCACAGCTGCCTTTAAAGGAGACGTCCACTTACAAGTTAGCGACACACCGACACTGGGCTACAGTCCTTACAGAACGCCATACTATGAGTCTAATGATCACATGGTGTCTCCGGCCTGCCATGTCTTCTCCTGATACCGAAAGACGGTCAGCTCCCTGGATGTGAAGGAGGAGGATGAACCACTCTCCTGTGACGAAGAAGAAGACCTCTCCATCCAGTACACCATCGTTGGAGAGGCCCAGGGCTTTATGGATGTGATTTATCTGGTCTTATCAAGAGGAGCCATTGTTTTACAAGGAGTTGAACGGGTGGAAATCAAAGATAAATTGGTGAATGAGGGCGAGGTGTCCTTTAAGCTGACGGTGTCTCCAGACATGGCGCCAGACGTCCAGGTCGTGGCTTACGCCGTCCTCCCCAGTGAGACGGTGATCGCCAACAGCGCGGACTTCTCTACCGAGCAGTGCTTCAGTCAAAAGGTGTCGCTGGCGTTTTCTCCGTCCTCGGCCGTCCCAGGAGAGGAGACCATCATGCGGGTTACCACCCAGCCAGAATCTCTGTGTGGCGTGAGCGCTGTTGACCAGAGCGTCCTCATCAAGGAGCCAGGGAAGACTCTGAATGCAGACAAGATATTTCAATTGTTGCCGGTCACAAAAATGTCCTATATTCCATATGACGTTGAAGACAGTGTAGAATGTTTGCCTGTGAGACCGAGAAGATCTATTTTGCCATACCCCAGAGGTGATGGGACAGCTGACGCTTATACAGTTTTCCAGAATGTAGGGATGAAGATGGCAACAAACCTGGTTATCAGAGATCCTTCATGCCTCGAATACAAAGGAAAAGAATACTACCAGGGCTATGGCGGCTATGGCAACTATGCCATAATGAGAGCAGAAATGGCAGCCCCTGGCCCTGTTGGACTTCCTGTGGCTTTTAATGGGCCATCTCCTGATCAGTCCCCAGTAGAGACGGTCCGCACTTTCTTCCCTGAGACCTGGATATGGGACCTGGTGGAAGTTGGAGAGTTTGGAACGAAGAATGTGTCCCTCACTGTCCCGGACACCATCACCACCTGGGAGACGGAGGCGTTCTGTCTGTCCCCTCAGGGTTTCGGCTTGGCGCCGCGTAAAAACCTCACGGTCTTCCAGCCCTTCTTCCTGGAGCTCAGCCTGCCCTACTCCATCATCCGGGGGGAGCACTTTGAACTGAAGGCAACCACCTTCAACTACCTGACCAGCTGCATCAtgGTCACTGTGACTCCAGCCCCCTCCTTAGATTACACCCTCACCCCCCTCTCTGGTGACCAGTACACATCCTGTCTGTGTGGCAGTGAGCGCAAGACCCTCAGCTGGACCATGGCCCCCTCAGCCTTAGGAGTTGTAAATGTGTCGGTGAGTGCTGAGGCCGTGACATCCCAAATCTCATGTGACAATGAGGTTGTGAGCGTGCCTGAAAGAGGACGAATTGATGTGGTCACACGACCTCTCATAGTAAAGGCTGAGGGAACTGAGGTGACCAACACCTACAACTGGCTGCTCTGCCCAAAAGGGCAAGCTTTGACGGAGGAAGTGGACATAGAACTCCCTGAGAACATTGCTGGATCTGCCCGTGCTTCAGTATCAGTACTCGGTGACATCCTGGGCCGGGCTCTGGAGAACCTGGATGGGCTGCTGCAGATGCCGTATGGATGTGGCGAGCAGAACATGGCGCTCCTTGCCCCAGACATCTACATCCTGGAGTACCTGAGAGACACCCAGCAGCTGACCCCAGCCATCAGGAACAAGGCTACCAACTTCCTGACCAGTGGCTACCAGAGACAGCTGAACTACAAAGATAACGACGGCGCTTACAGCACATTTGGAGCAGGACCAGGGAACACTTGGCTGACTGCATTTGTGTTGCGATCGTTTGCCAAAGCACAGACTTTCATCTACATTGACCCAGCCAACATCGAAGCGTCCGTGACTTGGCTGAaaagtaaacaacaacaaaatggcTGTTTTGAACAGTCGGGAAAGCTCTTCCACACCATAATGAAGGGTGGAGTGTCTGATGAAGTTACTCTCAGTGCCTACATCACTGCTGCCTTCTTGGAGATGAACATGTACATAGATGATCCTGCGGTTCATGGGCCGGTGAAGGCTAGCTTGTCTTGCCTCAAGGAGTCCATCAGTGACCTCAGCAACACCTACGCCACAGCTCTGCTGGCGTACGTCTTCACCCTGGCAGGAGACATGGAGACCCGTGCTCACCTACTGGGTCACCTAGACGCTGTTGCGTTACGAGAAGgaGGTTTCCTCCACTGGTCTCAGACAGCAACAGAAACgtcagcctctctgtctgtggAGACCAGCTCCTATGTGCTGCTGGCTAAACTCAGTGCCTCCCCGACTGCTGAAGACCTGGGCTACGCCAGCCGCATCGTTAGATGGCTGACGAGCCAGCAGAACTATTACGGAGGATTCTCCTCCACACAGGACACCGTGGTGGCTCTTCAGGCTCTGGCTCTCTACTCCACTCTGGTGTTCAGTCCAGAGGGTTCAAGCACCGTGACGGTCCGGTCTCCCGGGGGCCAGCTGGTGTTTGACGTGAATCGGAACAACAAACTGCTCTACCAGGAGAAGCAGCTGCAGGACGTGACGGGAAAGTACAGCCTGGAGGTGAAGGGCACTGCATGTGCTGCCATACAGATTTCCCTTGTTTATAACATCCCAACTCCTGCTGCTGATACCACCCTCAGTGTTCTGGTCGAACCAGAGGCCAACTGCACCAGCAAAATACCCAAACTCAGTCTGAAGCTAACATCCCTATATAGTGGAAAGGAGTCCAGTACAAACATGGTTATCCTGGATATCAAAATGCTCTCTGGATTTGTCCCAGACCCAGAGTCTTTGAACATGCTCAAAGGTGCCCTGCTGGTGGATCGTGTTGAACAAAAGGAGGATCATGTTCTGGTGTACATACGGGAGTTACAGAAGGACAGAAGAATCAACCACAGCCTGACGCTCGTACAGGAGTACCAAGTGCAGAACCTGAAGCCAGCCGTGGTCAAGATCTACGACTACTACCAGCCAAGTGACCAGTCTGATACAGCATACATCGACCCTTGTGTTGCAGCTTGAAGCATGTGGTCAGTCCTCTCTTCATCCAGAAGATGCACATTATGTACTAACACCATGTCTGTTTTGTATTTCCTTGTTAGTATTCTGCCACAACCCCTTACAGCTGTGTAACTACTGTCTGAAGTGAAATGCATAATggataattaaataaaaaaatgtgacaTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039787138.1 True 4683 mRNA 0.51 37 12218910 12235751

Neighbor

gene id symbol gene type direction distance location
LOC120550138 NA coding upstream 45214 12144299 ~ 12173696 (+)
aamdc aamdc,LOC102795396 coding upstream 141035 12073618 ~ 12077875 (+)
LOC120550190 LOC103358193 coding upstream 162366 12045615 ~ 12056544 (+)
LOC120550300 LOC107727921,LOC103377937,LOC107661103,LOC100710678,LOC101484592 coding upstream 187106 12010676 ~ 12031804 (+)
LOC120550284 LOC106522765 coding upstream 245730 11957896 ~ 11973180 (+)
LOC120550477 NA coding downstream 19886 12255637 ~ 12273823 (+)
aqp11 aqp11,LOC102780836 coding downstream 152821 12388572 ~ 12393838 (+)
LOC120552565 vstm5 coding downstream 333378 12569129 ~ 12573338 (+)
cep295 NA coding downstream 351862 12587613 ~ 12614479 (+)
LOC120554572 NA coding downstream 387046 12622797 ~ 12622987 (+)
LOC120550541 NA non-coding upstream 18019 12199794 ~ 12200891 (+)
LOC120550493 NA non-coding upstream 81576 12132351 ~ 12137334 (+)
LOC120550573 NA non-coding upstream 118333 12099978 ~ 12100577 (+)
G16293 NA non-coding upstream 189785 12022221 ~ 12029125 (+)
G16292 NA non-coding upstream 191283 12012498 ~ 12027627 (+)
G16464 NA non-coding downstream 177748 12413499 ~ 12415940 (+)
G16463 NA non-coding downstream 180259 12416010 ~ 12420722 (+)
G16484 NA non-coding downstream 230704 12466455 ~ 12466745 (+)
G16511 NA non-coding downstream 332043 12567794 ~ 12568464 (+)
G16559 NA non-coding downstream 372762 12608513 ~ 12609663 (+)
G16267 NA other upstream 318037 11894504 ~ 11900873 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 1713572 10388232 ~ 10505338 (+)
G15712 NA other upstream 2215315 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 2215538 9866710 ~ 10003372 (+)
G15642 NA other upstream 2550431 9645137 ~ 9668479 (+)
G16467 clns1a,LOC102781126 other downstream 160244 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 206379 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 394923 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 633079 12868830 ~ 12922469 (+)
hif1al NA other downstream 872111 13107862 ~ 13137034 (+)

Expression


Co-expression Network