LOC120550284 (LOC106522765)


Basic Information

Item Value
gene id LOC120550284
gene name LOC106522765
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 11957896 ~ 11973180 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039787152.1
CTGGCGAGGCGACATGGCTACTAAGCAGCCCGAAGATGCCTCCGGGGACTCGAGCTGTGAGAGCAGGGGACTCATGGAGAGGATCAGGAAATTCAGCCCAAAGGACGTTTTCACCTGgCAGGTTGCCAAGACGTTGGCCATGGGTCAGGGCCTGGCTGGGCTCATCTGCGGGACGGCCATCACCTCCCAGTACCTGGCTATGAGCTTCCATGTGAACACACCCATGCTGCAGAGCTTCTTGAACTACGCCCTGCTGTGTGTCACCTACACCCCCATGCTGCTCTGCAGAACAGGGGATGGCAATATTTTACAGATTGTGAAGAGGCGATGGTGGAAGTACCTCCTGCTGGGGCTGGTGGACGTGGAAGCCAACTACGCTGTGGTGAAAGCATACCAATACACCACCCTCACCAGTATACAGCTGCTGGACTGCTTTGTGGTCCCGGTGCTGATGGTCCTGTCCTGGTGGTTTCTGAAGACACGCTACAGGCTGGTCCACTATATAGCCATCTGCATCTGTCTCCTCGGGGTGGGGGCCATGGTGGGGGCCGACCTGCTGGCTGGACGAGACCAGGGCTCCACCTCAAACATCCTGTTAGGTGACGGTCTGGTGCTGCTCAGCGCTTCGCTGTACGCGGTGTCTAATGTGTGTCAGGAATACACAGTGAAGAACCTCAGCAGGGTGGAGTTCCTGGGCATGGTCGGCCTGTTCGGCACAATCATCAGCAGCGTTCAGATGGTGATCCTGGAACGTCATGAAGTTGCTACCATCCAGTGGAGCTGGCAAATCGGGCTCCTGTTCTCTGCCTACGCGCTGTGTATGTACGCTCTGTACAGCTGTATGCCCATAGTGGTGAGGCTGAGCAGCGCCACCGCTGTCAACCTCTCCCTGCTCACCGCTGACCTCTTCAGCCTCTTCTGTGGGATCTTCCTCTTCCAGTACAAcTTCTCCGGACTCTACCTGGTCTCGCTGGTGGTCGTCCTCATTGGCTTCATCGCCTTCAACGCTGTGCCAACGCccgccgcctcctcctcctcttcctcctcctcctcctcctcctcctcgtccgcCTCCATCTGTGAGGAAGGTTATGACAACCCCGCGGCCGCTCACGTCGACGTCACCGAGCGGGAAGTGGCGGTGAGCATCGCCGCTGAGGAGGAGCGGcaggggggaggtggggggagggaggaggaagaggaggagaggacgaAGGCGAAGAAGAGGAGAGCTTCCGGGCCGTCACAGAGCCTCCGACGAGGGAGTGATGATGAGGTTGTTGGACGCAGCACTAAAATGTAAAGTACAGCAAGACAGCCTGT

Function

NR:

description
PREDICTED: solute carrier family 35 member F2-like isoform X2

GO: NA

KEGG:

id description
K15287 SLC35F1_2; solute carrier family 35, member F1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039787152.1 True 1323 mRNA 0.59 8 11957896 11973180

Neighbor

gene id symbol gene type direction distance location
LOC120551249 NA coding upstream 74872 11871928 ~ 11883024 (+)
ompa omp,LOC102310369,LOC101166404,LOC105930201,LOC106535736 coding upstream 124532 11829812 ~ 11833364 (+)
LOC120550461 NA coding upstream 344674 11592428 ~ 11613222 (+)
LOC120550095 NA coding upstream 370635 11580446 ~ 11587261 (+)
kctd14 kctd14 coding upstream 384670 11565261 ~ 11573226 (+)
LOC120550300 LOC107727921,LOC103377937,LOC107661103,LOC100710678,LOC101484592 coding downstream 37496 12010676 ~ 12031804 (+)
LOC120550190 LOC103358193 coding downstream 72435 12045615 ~ 12056544 (+)
aamdc aamdc,LOC102795396 coding downstream 100438 12073618 ~ 12077875 (+)
LOC120550138 NA coding downstream 171119 12144299 ~ 12173696 (+)
LOC120550122 NA coding downstream 245730 12218910 ~ 12235751 (+)
G16270 NA non-coding upstream 45216 11900041 ~ 11912680 (+)
G16261 NA non-coding upstream 67649 11856351 ~ 11890247 (+)
G16250 NA non-coding upstream 138624 11818880 ~ 11819272 (+)
G16237 NA non-coding upstream 145511 11754374 ~ 11812385 (+)
G16229 NA non-coding upstream 186213 11689220 ~ 11771683 (+)
G16283 NA non-coding downstream 7960 11981140 ~ 11982906 (+)
G16292 NA non-coding downstream 39318 12012498 ~ 12027627 (+)
G16293 NA non-coding downstream 49041 12022221 ~ 12029125 (+)
LOC120550573 NA non-coding downstream 126798 12099978 ~ 12100577 (+)
LOC120550493 NA non-coding downstream 159171 12132351 ~ 12137334 (+)
G16267 NA other upstream 57023 11894504 ~ 11900873 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 1452558 10388232 ~ 10505338 (+)
G15712 NA other upstream 1954301 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 1954524 9866710 ~ 10003372 (+)
G15642 NA other upstream 2289417 9645137 ~ 9668479 (+)
G16467 clns1a,LOC102781126 other downstream 422815 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 468950 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 657494 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 895650 12868830 ~ 12922469 (+)
hif1al NA other downstream 1134682 13107862 ~ 13137034 (+)

Expression


Co-expression Network