LOC120550461


Basic Information

Item Value
gene id LOC120550461
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 11592428 ~ 11613222 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039787165.1
CAATGGATGGACGCAATGACGGGATTGTGGGGGTCAAACTCCACCCCGAATTGGCTCTCATTCATGGGTCGTCCTGGGATTCAGATGTGGACATGGAAGCTGTGTGTCTTCTTGAGCTGGATGTGCGTGGGCCAGGCGGCGGCAGGACCGCAGTACATGGTAGCCATTCCTGCAATTCTTGAATCTGGCGCTGAGACCAGATTCTGTGCCAGTCTCCTGGAGCCCAGCGAGACTCTGGAAATGAGCGTCACTCTGATGTCTGAAGAGGCGAATACAACCCTTCTGGAGAAGACCTCCAGTGTAGAATTTCATACCTGCATTGACTTTAAGGTTCCTTTAGTGCAGGATGAAGTGGTGCAGAACTTTGAGGTGGAGGTACGAGGCGACACGTTCTACTCTAAAGAAGTCCGAAAAGTTAAGATCAAAGTCTATCGACCAATGACCTTCATCCAAACGGATAAACCAATCTACCTCCCAGGACAAACGGTGCATTTCAGAGTCATCACACTGGATACCAAGTTAAGACCTGTCAATCAGCTGTACAATGTAATCGAAATTGAGGATTCTAACAGCAACAGGATTGGCCAGTGGCTGAATGAAACCTCCTCCAATAGGAAGATATTGCAGCTTTCTTACGCCTTGAACTCTGAGGCCCGTGAAGGAGCCTACCAAGTTACTGTGTCGACTGGGTCTGATAAAATGCAACACAGCTTCAAGGTGGAAAAATACgTTTTGCCTAAATTTGACCTACAAATAAATGCACCTGATGAAGTAAGCATTAATCAGGAAGAAGTCAAAGCTGAAGTCTGTGCCACGTATACATACGGACAGCCTGTGCCAGGCAGTGTTGACTTGAAGGTGTGCCAACCTTTTGATCCCTATGTTATACCCCATGCATTCACCCCTGAACATCCAGAGGGAATCTCTGTAATCCCGATGCCTTGCTACGAGGAGACAAAGCAGACGGACAAGAGAGGCTGTGCCACTTTCAGCTTCACAATGTCAACTTTCACGAGAGTTGCGCAGGAGGCGCTGCAAGATGAACTGCAACTCAGTGCAAATATGGAAGAGGAGGGGACAGGTATTTCACGCTCCCAAGAGAAGACTACAGTGATTTCTTATGTTGTTGGAAAGCTGTCTTTCACCGACACTCCCCAGACTTATAACAAAGGATCAAATGTGGAAGGAGAAGTTAAAGCGGTTTATTACAATAATACACCCATTCCTGACATGCCGGTGTTCCTGTTTGAGGGTGAAAGGTGGTCATCGCGTTGGTTACAGAATCTCACAACCGATGGTGATGGTGTCGCCGCTTTCTCATTGAGCACAGCTGCCTTTAAAGGAGACGTCCACTTACAAGTTAGCGACACGCCGACACTGGGCTACAGTCCTTACAGAACGCCATACTATGAGTCTAACGATCACACGGTGTCTTTGGCCACGCCTTCTTCTCCTGATACGAAGACGGTCAGCTCCCTGGATGTGAAGGAGAAGGATGAACCACTCTCCTGTGACGAAGAAGAAGACCTCTCCATCCAGTACACCATCGTTGGAGAGGCCCAGGGCTTTATGGATGTGATTTATCTGGTCTTATCGAGAGGAGCCATTGTTTTACAAGGAGTTGAACGGGTGGAAATCAAAGATAAATTGGTGAATGAGGGCGAGGTGTCCTTTAAGCTGACGGTGTCTCCAGACATGGCGCCAGACGTCCAGGTCGTGGCTTACGCCGTCCTCCCCAGTGAGACGGTGATCGCCAACAGCGCGGACTTCTCTACCGAGCAGTGCTTCAGTCAAAAGGTGTCTCTGGAGTTTTCTCCGTCCTCGGCCGTCCCAGGAGAGGAGACCATCATGCGGGTTACCACCCAGCCAGAATCTCTGTGTGGCGTGAGCGCTGTTGACCAGAGCGTCCTCATCAAGGAGCCAGGGAAGACTCTGGATGCAGACAAGATATTTCAATTGTTGCCGGTCACAAAAATGTCCTATATTCCATATGACGTTGAAGACAGTGTAGAATGTTTGCCTGGGAGACCGAGAAGATCTATTTTGCCATACCCCAGAGGTGATGGGACAGCTGACGCTTATACAGTCTTCCAGAATGTAGGGATGAAGATGGCAACAAACCTGGTTATCCGAGAGCCTTCATGCCTCGAATACAAAGGAAAAGAATACTACCAGGGCTATGGTGGCTATGGTGGCTATAGTGGCTATGCCGTAATGGAAGAAATGGCAGCCCCTTTCCCTGTTGGACTTGAAGTGGCTCTTTATGGGCCATTTCCTGATCAACCCCCAGTAGAGACGGTCCGCACTTTCTTCCCTGAGACCTGGATATGGGACCTGGTGGAAGTTGGAGGGTTTGGAACGAAGAATGTGTCCCTCACTGTCCCGGACACCATCACCACCTGGGAGACGGAGGCGTTCTGTCTGTCCCCTCAGGGTTTCGGCTTGGCGCCGCGTAAAAACCTCACGGTCTTCCAGCCCTTCTTCCTGGAGCTCAGCCTGCCCTACTCCATCATCCGGGGGGAGCACTTTAAACTGAAGGCTACCACCTTCAACTACCTGACCAGCTGCATCATgGTCACTGTGACTCCAGCCCCCTCCTTAGATTACACCCTCACCCCCCTCTCTGGTGACCAGTACACATCCTGTCTGTGTGGCAGTGAGCGCAAGACCCTCAGCTGGACCATGGCCCCCTCATCCTTAGGAGTTGTAAATGTGTCGGTGAGTGCTGAGGCCGTGACATCCCATATCTCATGTGACAATGAGGTTGTGAGCGTGCCTGAAAGAGGACGAATTGATGTGGTCACACGACCTCTCATAGTAAAGGCTGAGGGAACTGAGGTGACCAACACCTACAACTGGCTGCTCTGCCCAAAAGGGCGAGCTTTGACGGAGGAAGTGGACATAGAACTCCCTGAGAACATTGCTGGATCTGCCCGTGCTTCAGTATCAGTACTCGGTGACATCCTGGGCCGGGCTCTGGAGAACCTGGATGGGCTGCTGCAGATGCCGTATGGATGTGGCGAGCAGAACATGGCGCTCCTTGCCCCAGACATCTACATCCTGGAGTACCTGAGAGACACCCAGCAGCTGACCCCAGCCATCAGGAACAAGGCTACCAACTTCCTGACCAGTGGCTACCAGAGACAGCTGAACTACAAAGATAACTACGGCGCTTACAGCACCTTTGGAGCAGGACCAGGGAACACTTGGCTGACTGCATTTGTGTTGCGCTCGTTTGCCAAAGCACAGACTTTCATCTACATTGACCCAGCCAACATCGAAGCGTCCGTGACTTGGCTGAaaagtaaacaacaacaaaatggcTGTTTTGAACAGTCGGGAAAGCTCTTCCACACCATAATGAAGGGTGGAGTGTCTGATGAAGTTACTCTCAGTGCCTACATCACTGCTGCCTTCTTGGAGATGAATATGTACATAGATGATCCTGCGGTTCATGGGCCGGTGAAGGCTAGCTTGTCTTGCCTCAAGGAGTCCATCAGTGACCTCAGCAACACCTACACCACAGCTCTGCTGGCGTACGTCTTCACCCTGGCAGGAGACATGGAGACCCGTGCTCACCTACTGGGTCACCTAGATGCTGTTGGGTTACGAGAAGgaGGTTTCCTCCACTGGTCTCAGACAGCAACAGAAACgtcagcctctctgtctgtggAGACCAGCTCCTATGTGCTGCTGGCTAAACTCAGTGCCTCCCCGACTGCTGAAGACCTGGGCTACGCCAGCCGCATCGTTAGATGGCTGACGAGCCAGCAGAACTATTACGGAGGATTCTCCTCCACACAGGACACCGTGGTGGCTCTTCAGGCTCTGGCTCTCTACTCCACTCTGGTGTTTAGTCCAGAGGGTTCAAGCACCGTGACGGTCCGGTCTCCCGGGGGCCAGCTGGTGTTTGACGTGAATCGGAACAACAAACTGCTCTACCAGGAGAAGCAGCTGCGGGACGTGACGGGAAAGTACAGCCTGGAGGTGAAGGGCACTGCATGTGCTGCCATACAGATTTCCCTTGTTTATAACATCCCAACTCCTGCTGCTGTTACCACCCTCGGTGTTCTGGTCAAACCAGAGGCCGACTGCACCAGCAAAATACCCAAACTCAGTCTGAAGCTAACATCCCTATATAGTGGAAAGGAGTCCAGTACAAACATGGTTATCCTGGATATCAAAATGCTCTCCGGATTTGTCCCAGACCCAGAGTCTTTGAACATGCTCAAAGGTGCCCTGCTGGTGGATCGTGTTGAACAAAAGGAGGATCATGTTCTGGTGTACATACGGGAGTTACAGAAGGACCGAAGAATCAACCACAGCCTGACGCTCGTACAGGAGTACCAAGTGCAGAACCTGAAGCCAGCCGTGGTCAAGATCTACGACTACTACCAGCCAAGTGACCAGTCTGATACAGCATACATCGACCCTTGTGTTGCAGCTTGAAGAGCATGTGGTCAGTCCTCTCGTCATCCAGAAGATGCACATTATGTACTAACACCATGTCTGTTTTGTATTTCCTGGTTAGTATTCTGCCACAACCCCTTTCAGCTGTGTAACTACGGTCTGAAGTGAAATGCATAAtcgataattaaataaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039787165.1 True 4603 mRNA 0.51 37 11592428 11613222

Neighbor

gene id symbol gene type direction distance location
LOC120550095 NA coding upstream 5167 11580446 ~ 11587261 (+)
kctd14 kctd14 coding upstream 19202 11565261 ~ 11573226 (+)
LOC120554420 NA coding upstream 30024 11562256 ~ 11562404 (+)
LOC120554427 NA coding upstream 31889 11560391 ~ 11560539 (+)
LOC120554442 NA coding upstream 34828 11557452 ~ 11557600 (+)
ompa omp,LOC102310369,LOC101166404,LOC105930201,LOC106535736 coding downstream 216590 11829812 ~ 11833364 (+)
LOC120551249 NA coding downstream 258706 11871928 ~ 11883024 (+)
LOC120550284 LOC106522765 coding downstream 344674 11957896 ~ 11973180 (+)
LOC120550300 LOC107727921,LOC103377937,LOC107661103,LOC100710678,LOC101484592 coding downstream 397454 12010676 ~ 12031804 (+)
LOC120550190 LOC103358193 coding downstream 432393 12045615 ~ 12056544 (+)
G16207 NA non-coding upstream 57127 11535088 ~ 11535301 (+)
LOC120572352 NA non-coding upstream 106358 11484612 ~ 11486070 (+)
LOC120552116 NA non-coding upstream 150169 11427476 ~ 11442259 (+)
G16192 NA non-coding upstream 173547 11418614 ~ 11418881 (+)
G16190 NA non-coding upstream 246072 11346015 ~ 11346356 (+)
G16229 NA non-coding downstream 75998 11689220 ~ 11771683 (+)
G16235 NA non-coding downstream 121176 11734398 ~ 11752981 (+)
G16237 NA non-coding downstream 141152 11754374 ~ 11812385 (+)
G16250 NA non-coding downstream 205658 11818880 ~ 11819272 (+)
G16261 NA non-coding downstream 243129 11856351 ~ 11890247 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 1087090 10388232 ~ 10505338 (+)
G15712 NA other upstream 1588833 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 1589056 9866710 ~ 10003372 (+)
G15642 NA other upstream 1923949 9645137 ~ 9668479 (+)
LOC120551159 fam13c other upstream 1939597 9631391 ~ 9652831 (+)
G16267 NA other downstream 281282 11894504 ~ 11900873 (+)
G16467 clns1a,LOC102781126 other downstream 782773 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 828908 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 1017452 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 1255608 12868830 ~ 12922469 (+)

Expression


Co-expression Network