LOC120550477


Basic Information

Item Value
gene id LOC120550477
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 12255637 ~ 12273823 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039787166.1
TGAATTGTCATCATGACCCGGGATATATACCGATGTAGACGGGCTCGGTCAGAACTTCCTAAAGGAGCGTCGAGCCCCCGATCAGACAACTCAGCCCAACCGTGGTAGGTGGTCTGAAAGAGTCATGGGTCGTCCTGGGATTCAGATGTGGACATGGAAGCTGTGTGTCTTCTTGAGCTGGATGTGCGTGGGCCAGGCGGCGGCAGGACCGCAGTACATGGTAGCCATTCCTGCAATTCTTGAATCTGGCGCTGAGACCAGATTCTGTGCCAGTCTCCTGGAGCCCAGCGAGACTCTGGAAATGAGCGTCACTCTGATGTCCCAAGAGGCGAATACAACCCTTCTGGAGAAGACCTCCAGTGTAGAATTTCATACCTGCATTGACTTTAAGGTTCCTTTAGTGCAGGATGAAGTGGTGCAGGACTTTGAGGTGGAGGTACGAGGCGACACGTTCTACTCTAAAGAAGTCCGAAAAGTTAAGATCAAAGTCTATCGACCAATGACCTTCATCCAAACGGATAAACCAATCTACCTCCCAGGACAAACGGTGCATTTCAGAGTCCTCACACTGGATACCAAGTTAAGACCTGTCCATCAGCTGTACGATGTAATCGTAATAGAGGATTCTAACAGCAACAGGATTGGCCAGTGGCTGAATGAAACCTCCTCCAATAGGAAGATATTGCAGCTTTCTTACGCCTTGAACTCTGAGGCCCGTGAAGGAGCTTACCAAGTTACTGTGTCAATTGGGTCTGAAAATCAACACAGCTTCAAGGTGGAAAAATACgTTTTGCCTAAATTTGACCTACAAATGAATGCACCTGATGAAGTAAGCATTAATCAGGAAGAAGTCAAAGCTGAAGTCTGTGCAACGTATACATACGGACAGCCTGTGCCAGGCAGTGTTGACTTGAAGGTGTGCCGACCTTTTGATCCCTATGTTATACCCCGTGCAATCACCCCTGAACATCCAGAGGGAGTCTCTGTAATCCCGATGCCTTGCTACGAGGAGACAAAGCAGACGGACAAGAGAGGCTGTGCCACTTTCAGCTTCACAATGTCAACTTTCACAAGAATTGCGCAGGAGGCGCTGCAAGATGTACTGCAACTCAGTGCAAATATGGAAGAGGAGGGGACAGGTATTTCACGCTCCCAAGAGAAGACTACGGGCATTTCTTATGTTGTTGGAAAGCTGTCTTTCACCGACACTCCCCAGACTTATAACAAAGGATCAAATGTGGAAGGAGAAGTAAGTGCATTTGgggtttttttaaaaaaaaaccccctTTTCGGACTTGCGGTGTTCCTGTTTGAGGGTGAAAGGTGGTCATCGCGTTGGTTACAGAATCTCACAACCGACGGTGATGGTGTCGCCGCTTTCTCATTGAGCACAGCTGCCTTTAAAGGAGACGTCCACTTACAAGTTAGCGACACGCCGACACTGGGCTACAGTCCTTACAGAACGCCATACTATGAGTCTAACGATCACATGGTGTCTTTGGCCACACCTTCTTCTCCTGATACGAAGACGGTCAGCTCCCTGGATGTGAAGGAGGAGGATGAACCACTCTCCTGTGACGAAGAAGAAGACCTCTCCATCCAGTACACCATCGTTGGAGAGGCCCAGGGCTTTATGGATGTGATTTATCTGGTCTTATCAAGAGGAGCCATTGTTTTACAAGGAGTTGAACGGGTGGAAATCAAAGATAAATTGGTGAATGAGGGCGAGGTGTCCTTGCAGCTGACGGTGTCTCCAGACATGGCGCCAGACGTCCAGGTCGTGGCTTACGCCGTCCTCCCCAGTGAGACGGTGATCGCCAACAGCGCGGACTTCTCTACCGAGCAGTGCTTCAGTCAAAAGGTGTCGCTGGCGTTTTCTCCGTCCTCGGCCGTCCCAGGAGAGGAGACCATCATGCGGGTTACCACCCAGCCAGAATCTCTGTGTGGCGTGAGTGCTGTTGACCAGAGCGTCCTCATCAAGGAGCCAGGGAAGACTCTGAATGCAGACAAGATATTTCAATTGTTGCCGGTCACAAAAATGTCCTATATTCCATATGACGTTGAAGACAGTGTAGAATGTTTGCCTGTGAGACCGAGAAGATCTATTTTGCCGTACCCCAGAGGTGATGGGACAGCTGACGCTTATACAGTTTTCCAGAATGTAGGGATGAAGATGGCAACAAACCTGGTTATCAGAGAGCCTTCATGCCTCGAATACAAAGGAAAAGAATACTACCAGGGCTATGGTGGCTATGGCGGCTATGGCAACTATGCCATAATGAGAGCAGAAATGGCAGCCCCTGGCCCTGTTGGACTTCCTGTGGCTTTTAATGGGCCATCTCCTGATCAGTCCCCAGTAGAGACGGTCCGCACTTTCTTCCCTGAGACCTGGATATGGGACCTGGTGGAAGTTGGAGGGTTTGGAACGAAGAATGTGTCCCTCACTGTCCCGGACACCATCACCACCTGGGAGACGGAGGCGTTCTGTCTGTCCCCTCAGGGTTTCGGCTTGGCGCCGCGTAAAAACCTCACGGTCTTCCAGCCCTTCTTCCTGGAGCTCAGCCTGCCCTACTCCATCATCCGGGGGGAGCACTTTGAACTGAAGGCAACCACCTTCAACTACCTGACCAGCTGCATCAtgGTCACTGTGACTCCAGCCCCCTCCTTAGATTACACCCTCACCCCCCTCTCTGGTGACCAGTACACATCCTGTCTGTGTGGCAGTGAGCGCAAGACCCTCAGCTGGACCATGGCCCCCTCAGCCTTAGGAGTTGTAAATGTGTCGGTGAGTGCTGAGGCCGTGACATCCCAAATCTCATGTGACAATGAGGTTGTGAGCGTGCCTGAAAGAGGACGAATTGATGTGGTCACACGACCTCTCATAGTAAAGGCTGAGGGAACTGAGGTGACCAACACCTACAACTGGCTGCTCTGCCCAAAAGGGCAAGCTTTGACGGAGGAAGTGGACATAGAACTCCCTGAGAACATTGCTGGATCTGCCCGTGCTTCAGTATCAGTACTCGGTGACATCCTGGGCCGGGCTCTGGAGAACCTGGATGGGCTGCTGCAGATGCCGTATGGATGTGGCGAGCAGAACATGGCGCTCCTTGCCCCAGACATCTACATCCTGGAGTACCTGAGAGACACCCAGCAGCTGACCCCAGCCATCAGGAACAAGGCTACCAACTTCCTGATCAGTGGCTACCAGAGACAGCTGAACTACAAAGATAACGACGGCGCTTACAGCACATTTGGAGCAGGACCAGGGAACACTTGGCTGACTGCATTTGTGTTGCGATCGTTTGCCAAAGCACAGACTTTCATCTACATTGACCCAGCGAACATCGAAGCGTCCGTGACTTGGCTGAaaagtaaacaacaacaaaatggcTGTTTTGAACAGTCGGGGAAGCTCTTCCACACCATAATGAAGGGTGGAGTATCTGATGAAGTTACTCTCAGTGCCTACATCACTGCTGCCTTCTTGGAGATGAACATGTACATAGATGATCCTGCGGTTCATGGGCCGGTGAAGGCTAGCTTGTCTTGCCTCAAGGAGTCCATCAGTGACCTCAGCAACACCTACACCACAGCTCTGCTGGCGTACGTCTTCACCCTGGCAGGAGACATGGAGACCCGTGCTCACCTACTGGGTCACCTAGACGCTGTTGCGTTACGAGAAGGAGGTTTCCTCCACTGGTCTCAGACAGCAACAGAAACgtcagcctctctgtctgtggAGACCAGCTCCTATGTGCTGCTGGCTAAACTCAGTGCCTCCCCGACTGCTGAAGACCTGGGCTACGCCAGCCGCATCGTTAGATGGCTGACGAGCCAGCAGAACTATTACGGAGGATTCTCCTCCACACAGGACACCGTGGTGGCTCTTCAGGCTCTGGCTCTCTACTCCACTCTGGTGTTCAGTCCAGAGGGTTCAAGCACCGTGACGGTCCGGTCTCCCGGGGGCCAGCTGGTGTTTGACGTGAATCGGAACAACAAACTGCTCTACCAGGAGAAGCAGCTGCAGGACGTGACGGGAAAGTACAGCCTGGAGGTGAAGGGCACTGCATGTGCTGCCATACAGATTTCCCTTGTTTATAACATCCCAACTCCTGCTGCTGATACCACCCTCAGTGTTCTGGTCGAACCAGAGGCCGACTGCACCAGCAAAATACCCAAACTCAGTCTGAACCTAACATCCCTATATAGTGGAAAGGAGTCCAGTACAAACATGGTTATCCTGGATATCAAAATGCTCTCTGGATTTGTCCCAGACCCAGAGTCTTTGAACATGCTCAAAGGTGCCCTGCTGGTGGATCGTGTTGAACAAAAGGAGGATCATGTTCTGGTGTACATACGGGAGTTACAGAAGGACCGAAGAATCAACCACAGCCTGACGCTCGTACAGGAGTACCAAGTGCAGAACCTGAAGCCAGCCGTGGTCAAGATCTACGACTACTACCAGCCAAGTGACCAGTCTGATACAGCATACATCAACCCTTGTGTTACAGCTTGAAGAGCATGTGGTCAGTCCTCACGTCATCCAGAAGATGCACATTATGTACTAACACCATGTCTGTTTTGTATTTCCTGGTTAGTATTCTGCCACAACCCCTCACAGCTGTGTAACTACTGTCTGAAGTGAAATGCATAATGGataattaaataaagaaatatgacATCAA

Function

GO: NA

KEGG:

id description
ko00590 Arachidonic acid metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039787166.1 True 4685 mRNA 0.51 38 12255637 12273823

Neighbor

gene id symbol gene type direction distance location
LOC120550122 NA coding upstream 19886 12218910 ~ 12235751 (+)
LOC120550138 NA coding upstream 81941 12144299 ~ 12173696 (+)
aamdc aamdc,LOC102795396 coding upstream 177762 12073618 ~ 12077875 (+)
LOC120550190 LOC103358193 coding upstream 199093 12045615 ~ 12056544 (+)
LOC120550300 LOC107727921,LOC103377937,LOC107661103,LOC100710678,LOC101484592 coding upstream 223833 12010676 ~ 12031804 (+)
aqp11 aqp11,LOC102780836 coding downstream 114749 12388572 ~ 12393838 (+)
LOC120552565 vstm5 coding downstream 295306 12569129 ~ 12573338 (+)
cep295 NA coding downstream 313790 12587613 ~ 12614479 (+)
LOC120554572 NA coding downstream 348974 12622797 ~ 12622987 (+)
trnak-uuu_2 NA coding downstream 723973 12997796 ~ 12997868 (+)
LOC120550541 NA non-coding upstream 54746 12199794 ~ 12200891 (+)
LOC120550493 NA non-coding upstream 118303 12132351 ~ 12137334 (+)
LOC120550573 NA non-coding upstream 155060 12099978 ~ 12100577 (+)
G16293 NA non-coding upstream 226512 12022221 ~ 12029125 (+)
G16292 NA non-coding upstream 228010 12012498 ~ 12027627 (+)
G16464 NA non-coding downstream 139676 12413499 ~ 12415940 (+)
G16463 NA non-coding downstream 142187 12416010 ~ 12420722 (+)
G16484 NA non-coding downstream 192632 12466455 ~ 12466745 (+)
G16511 NA non-coding downstream 293971 12567794 ~ 12568464 (+)
G16559 NA non-coding downstream 334690 12608513 ~ 12609663 (+)
G16267 NA other upstream 354764 11894504 ~ 11900873 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 1750299 10388232 ~ 10505338 (+)
G15712 NA other upstream 2252042 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 2252265 9866710 ~ 10003372 (+)
G15642 NA other upstream 2587158 9645137 ~ 9668479 (+)
G16467 clns1a,LOC102781126 other downstream 122172 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 168307 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 356851 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 595007 12868830 ~ 12922469 (+)
hif1al NA other downstream 834039 13107862 ~ 13137034 (+)

Expression


Co-expression Network