lrrc51 (lrrc51,LOC100706293,LOC102797274,LOC102204925,LOC102290838,LOC104968276)


Basic Information

Item Value
gene id lrrc51
gene name lrrc51,LOC100706293,LOC102797274,LOC102204925,LOC102290838,LOC104968276
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 26873250 ~ 26877133 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039787902.1
TTTCCTTGGAAACGCGTTGTTGTCTTTCAGTTAACATAACGGCAGCTAGCTCTTATAACTTTAGCTAGTTGACAGAATATGACTTTAACTTTAGTTCTCTGACGTTACCTCGAAACACGGGTTTCTAAATAACCTGGGCTAAatagctatctagctagctagtgttgCTCTCATAATTTGCTTTAGTTTTTTGGTAAGTACGGTGTCGGTTTCCTATGATATTTGTGATGGATCAACAATATGAGGTGAGTGAAGGTGCGAATATGTGTGGAGCTCCAGTTGATTTATCTTTTAAACACATCAGCAGTTTGGCAGACGCATGGACAGAGGAACACAGCAGCGGTCTGCggcctttaaaaagaaattcgGAGAAGAAGTACCTAAGCTGCTCTCTGCGTCTCAATAACAACAACATCAGTGACCTTCATGACCTCCAAAAGACTGTAAGCCACTTCCTGGCTGAGCCATCACAGATTGCCTGGCTGGACCTTTCCTTCAACAAAATCTCACACATAGATCAAGTTTTGTGCGAGCTGCGTGACCTACGTGTGTTGTATCTACACGGCAACAGCATTTTTATTCTGTCAGAGGTGGACAGGCTGGGAGTGTTACCACATCTACACACCATTACTCTGCATGGAAATGTCATAGAAACCAACAAGGCTTACAGGAATCGTGTGATTTCTGCTTTGCCTCGGTTAAAGACGATGGACTTCAGTGCTGTGACGCGCCAGGAGCGAGTCATGGCAAAGATTTGGCATCACAGCAACAACCGCAGCAGAAGCAGCAAGGAGAACCTCCAGTGACTGCTTTCTCGTTTCCATCTTGGTGCGTTGAAATCATAGTTTCACCCAAATGTTCTGATCTCCACATCCACGACTGAAAAACCTCTAAAATATTGTATGTTTCTCTGTAGATCTGTGGTGATATCAGCAccattttaatgtttgttttgtctatttCTATCTGCTGAAATGAACAGTTTATTATTGGATAGTCCAAAGAGAAGTATACGCTTTATTACTTGATATAAAGTGATAGGGAGGAAATGTCACTGAACAATCCTGAGATATTGGATCTGACATTGTGTAGATGCATGTACATTCTCTGATATTGTTGCAAACATGGGTGTGGTTTGtgtaatatttgaatattctgGATTATTCTTCTATTACAGTGGTATACCAGTTAATGACTTTGTAGCATTACTGAACTAACCACTTCCCAGATATGAGCATGTAGATGTTAAGACTTATTTAAAAAGACACAAGTGATTATGTTGAAAATCTTTAATGAattaaaccaaaaaaacaaaccaacaaaaaatCTTAAAACCTTTTGGTACTAGCCTAAGATATTTCAAACATATTTCAGGTAGTATAACACATTtgagtaacaaacaaaacagaaagaaacCATTGCAAAAAGCTCAAATAAATTGCGTGGTTTAAATAATCACAGCCTTGCAGGTCATCCCTTTAGAGACTTCAGAGCAACTCACCGTGCTCCCTGCGTACGCATACAGTTGTGCTCTCTTCTGAAGagcaaataaacatttaaaaagacaaataaataatcacaaaaaaggTCTCGGATAATTTTATCTGCTGTGGTACATAGATTGTTAGCGTGCTCCCACACTGCTGCAATGGTTAGTTTCTGATTAATATGAATAACTCAATCATAATACAATCTGcagcgaaaagctttgtttaaAAGCTAACTAATGCAGGCCTTGAAAGTGTTCTTGTGTTtcataaaaacatttgttaTCACCACAAGATCTTAGCCAATCCTGAACAATGAACTCTCTACAAAAAGAGGAACTTCATACAATCCATCAtctgtttttatattcaatCAGAAAATTATGTACAAAGGCGGCATGAATACAGGATATCTGGCCCTGCACCCTCCACAAACCTACCCCTTTCATCTCTGTATGCCTCAGCTATTAAATATGTGAAGTTCTGGGATCTGA
>XM_039787912.1
TAAAGATTCACGTCACACCAGACACGCTCGGTTTTAATGTGGGCGGGGACAAATTAagttaaaaataattgttaaaaatTACAATTATTTGCTTTGCTTTATTATTTTTCTCCTTGGCGTTGTcagcattagctagctagttagctaggtTGCAGTTGGTCAAACAcgttttaaaatgaatgatgaCTGCCGAATCCGCCAACCCGGATGGGATGAACTACGTGTACAATTAAAAGATGTTTCTAGCAAGTGAGTGAAGGTGCGAATATGTGTGGAGCTCCAGTTGATTTATCTTTTAAACACATCAGCAGTTTGGCAGACGCATGGACAGAGGAACACAGCAGCGGTCTGCggcctttaaaaagaaattcgGAGAAGAAGTACCTAAGCTGCTCTCTGCGTCTCAATAACAACAACATCAGTGACCTTCATGACCTCCAAAAGACTGTAAGCCACTTCCTGGCTGAGCCATCACAGATTGCCTGGCTGGACCTTTCCTTCAACAAAATCTCACACATAGATCAAGTTTTGTGCGAGCTGCGTGACCTACGTGTGTTGTATCTACACGGCAACAGCATTTTTATTCTGTCAGAGGTGGACAGGCTGGGAGTGTTACCACATCTACACACCATTACTCTGCATGGAAATGTCATAGAAACCAACAAGGCTTACAGGAATCGTGTGATTTCTGCTTTGCCTCGGTTAAAGACGATGGACTTCAGTGCTGTGACGCGCCAGGAGCGAGTCATGGCAAAGATTTGGCATCACAGCAACAACCGCAGCAGAAGCAGCAAGGAGAACCTCCAGTGACTGCTTTCTCGTTTCCATCTTGGTGCGTTGAAATCATAGTTTCACCCAAATGTTCTGATCTCCACATCCACGACTGAAAAACCTCTAAAATATTGTATGTTTCTCTGTAGATCTGTGGTGATATCAGCAccattttaatgtttgttttgtctatttCTATCTGCTGAAATGAACAGTTTATTATTGGATAGTCCAAAGAGAAGTATACGCTTTATTACTTGATATAAAGTGATAGGGAGGAAATGTCACTGAACAATCCTGAGATATTGGATCTGACATTGTGTAGATGCATGTACATTCTCTGATATTGTTGCAAACATGGGTGTGGTTTGtgtaatatttgaatattctgGATTATTCTTCTATTACAGTGGTATACCAGTTAATGACTTTGTAGCATTACTGAACTAACCACTTCCCAGATATGAGCATGTAGATGTTAAGACTTATTTAAAAAGACACAAGTGATTATGTTGAAAATCTTTAATGAattaaaccaaaaaaacaaaccaacaaaaaatCTTAAAACCTTTTGGTACTAGCCTAAGATATTTCAAACATATTTCAGGTAGTATAACACATTtgagtaacaaacaaaacagaaagaaacCATTGCAAAAAGCTCAAATAAATTGCGTGGTTTAAATAATCACAGCCTTGCAGGTCATCCCTTTAGAGACTTCAGAGCAACTCACCGTGCTCCCTGCGTACGCATACAGTTGTGCTCTCTTCTGAAGagcaaataaacatttaaaaagacaaataaataatcacaaaaaaggTCTCGGATAATTTTATCTGCTGTGGTACATAGATTGTTAGCGTGCTCCCACACTGCTGCAATGGTTAGTTTCTGATTAATATGAATAACTCAATCATAATACAATCTGcagcgaaaagctttgtttaaAAGCTAACTAATGCAGGCCTTGAAAGTGTTCTTGTGTTtcataaaaacatttgttaTCACCACAAGATCTTAGCCAATCCTGAACAATGAACTCTCTACAAAAAGAGGAACTTCATACAATCCATCAtctgtttttatattcaatCAGAAAATTATGTACAAAGGCGGCATGAATACAGGATATCTGGCCCTGCACCCTCCACAAACCTACCCCTTTCATCTCTGTATGCCTCAGCTATTAAATATGTGAAGTTCTGGGATCTGA
>XM_039787921.1
TAAAGATTCACGTCACACCAGACACGCTCGGTTTTAATGTGGGCGGGGACAAATTAagttaaaaataattgttaaaaatTACAATTATTTGCTTTGCTTTATTATTTTTCTCCTTGGCGTTGTcagcattagctagctagttagctaggtTGCAGTTGGTCAAACAcgttttaaaatgaatgatgaCTGCCGAATCCGCCAACCCGGATGGGATGAACTACGTGTACAATTAAAAGATGTTTCTAGCAAGTGAGAAGGTGCGAATATGTGTGGAGCTCCAGTTGATTTATCTTTTAAACACATCAGCAGTTTGGCAGACGCATGGACAGAGGAACACAGCAGCGGTCTGCggcctttaaaaagaaattcgGAGAAGAAGTACCTAAGCTGCTCTCTGCGTCTCAATAACAACAACATCAGTGACCTTCATGACCTCCAAAAGACTGTAAGCCACTTCCTGGCTGAGCCATCACAGATTGCCTGGCTGGACCTTTCCTTCAACAAAATCTCACACATAGATCAAGTTTTGTGCGAGCTGCGTGACCTACGTGTGTTGTATCTACACGGCAACAGCATTTTTATTCTGTCAGAGGTGGACAGGCTGGGAGTGTTACCACATCTACACACCATTACTCTGCATGGAAATGTCATAGAAACCAACAAGGCTTACAGGAATCGTGTGATTTCTGCTTTGCCTCGGTTAAAGACGATGGACTTCAGTGCTGTGACGCGCCAGGAGCGAGTCATGGCAAAGATTTGGCATCACAGCAACAACCGCAGCAGAAGCAGCAAGGAGAACCTCCAGTGACTGCTTTCTCGTTTCCATCTTGGTGCGTTGAAATCATAGTTTCACCCAAATGTTCTGATCTCCACATCCACGACTGAAAAACCTCTAAAATATTGTATGTTTCTCTGTAGATCTGTGGTGATATCAGCAccattttaatgtttgttttgtctatttCTATCTGCTGAAATGAACAGTTTATTATTGGATAGTCCAAAGAGAAGTATACGCTTTATTACTTGATATAAAGTGATAGGGAGGAAATGTCACTGAACAATCCTGAGATATTGGATCTGACATTGTGTAGATGCATGTACATTCTCTGATATTGTTGCAAACATGGGTGTGGTTTGtgtaatatttgaatattctgGATTATTCTTCTATTACAGTGGTATACCAGTTAATGACTTTGTAGCATTACTGAACTAACCACTTCCCAGATATGAGCATGTAGATGTTAAGACTTATTTAAAAAGACACAAGTGATTATGTTGAAAATCTTTAATGAattaaaccaaaaaaacaaaccaacaaaaaatCTTAAAACCTTTTGGTACTAGCCTAAGATATTTCAAACATATTTCAGGTAGTATAACACATTtgagtaacaaacaaaacagaaagaaacCATTGCAAAAAGCTCAAATAAATTGCGTGGTTTAAATAATCACAGCCTTGCAGGTCATCCCTTTAGAGACTTCAGAGCAACTCACCGTGCTCCCTGCGTACGCATACAGTTGTGCTCTCTTCTGAAGagcaaataaacatttaaaaagacaaataaataatcacaaaaaaggTCTCGGATAATTTTATCTGCTGTGGTACATAGATTGTTAGCGTGCTCCCACACTGCTGCAATGGTTAGTTTCTGATTAATATGAATAACTCAATCATAATACAATCTGcagcgaaaagctttgtttaaAAGCTAACTAATGCAGGCCTTGAAAGTGTTCTTGTGTTtcataaaaacatttgttaTCACCACAAGATCTTAGCCAATCCTGAACAATGAACTCTCTACAAAAAGAGGAACTTCATACAATCCATCAtctgtttttatattcaatCAGAAAATTATGTACAAAGGCGGCATGAATACAGGATATCTGGCCCTGCACCCTCCACAAACCTACCCCTTTCATCTCTGTATGCCTCAGCTATTAAATATGTGAAGTTCTGGGATCTGA
>XM_039787930.1
TGGAAACGCGTTGTTGTCTTTCAGTTAACATAACGGCAGCTAGCTCTTATAACTTTAGCTAGTTGACAGAATATGACTTTAACTTTAGTTCTCTGACGTTACCTCGAAACACGGGTTTCTAAATAACCTGGGCTAAatagctatctagctagctagtgttgCTCTCATAATTTGCTTTAGTTTTTTGGTGAGTGAAGGTGCGAATATGTGTGGAGCTCCAGTTGATTTATCTTTTAAACACATCAGCAGTTTGGCAGACGCATGGACAGAGGAACACAGCAGCGGTCTGCggcctttaaaaagaaattcgGAGAAGAAGTACCTAAGCTGCTCTCTGCGTCTCAATAACAACAACATCAGTGACCTTCATGACCTCCAAAAGACTGTAAGCCACTTCCTGGCTGAGCCATCACAGATTGCCTGGCTGGACCTTTCCTTCAACAAAATCTCACACATAGATCAAGTTTTGTGCGAGCTGCGTGACCTACGTGTGTTGTATCTACACGGCAACAGCATTTTTATTCTGTCAGAGGTGGACAGGCTGGGAGTGTTACCACATCTACACACCATTACTCTGCATGGAAATGTCATAGAAACCAACAAGGCTTACAGGAATCGTGTGATTTCTGCTTTGCCTCGGTTAAAGACGATGGACTTCAGTGCTGTGACGCGCCAGGAGCGAGTCATGGCAAAGATTTGGCATCACAGCAACAACCGCAGCAGAAGCAGCAAGGAGAACCTCCAGTGACTGCTTTCTCGTTTCCATCTTGGTGCGTTGAAATCATAGTTTCACCCAAATGTTCTGATCTCCACATCCACGACTGAAAAACCTCTAAAATATTGTATGTTTCTCTGTAGATCTGTGGTGATATCAGCAccattttaatgtttgttttgtctatttCTATCTGCTGAAATGAACAGTTTATTATTGGATAGTCCAAAGAGAAGTATACGCTTTATTACTTGATATAAAGTGATAGGGAGGAAATGTCACTGAACAATCCTGAGATATTGGATCTGACATTGTGTAGATGCATGTACATTCTCTGATATTGTTGCAAACATGGGTGTGGTTTGtgtaatatttgaatattctgGATTATTCTTCTATTACAGTGGTATACCAGTTAATGACTTTGTAGCATTACTGAACTAACCACTTCCCAGATATGAGCATGTAGATGTTAAGACTTATTTAAAAAGACACAAGTGATTATGTTGAAAATCTTTAATGAattaaaccaaaaaaacaaaccaacaaaaaatCTTAAAACCTTTTGGTACTAGCCTAAGATATTTCAAACATATTTCAGGTAGTATAACACATTtgagtaacaaacaaaacagaaagaaacCATTGCAAAAAGCTCAAATAAATTGCGTGGTTTAAATAATCACAGCCTTGCAGGTCATCCCTTTAGAGACTTCAGAGCAACTCACCGTGCTCCCTGCGTACGCATACAGTTGTGCTCTCTTCTGAAGagcaaataaacatttaaaaagacaaataaataatcacaaaaaaggTCTCGGATAATTTTATCTGCTGTGGTACATAGATTGTTAGCGTGCTCCCACACTGCTGCAATGGTTAGTTTCTGATTAATATGAATAACTCAATCATAATACAATCTGcagcgaaaagctttgtttaaAAGCTAACTAATGCAGGCCTTGAAAGTGTTCTTGTGTTtcataaaaacatttgttaTCACCACAAGATCTTAGCCAATCCTGAACAATGAACTCTCTACAAAAAGAGGAACTTCATACAATCCATCAtctgtttttatattcaatCAGAAAATTATGTACAAAGGCGGCATGAATACAGGATATCTGGCCCTGCACCCTCCACAAACCTACCCCTTTCATCTCTGTATGCCTCAGCTATTAAATATGTGAAGTTCTGGGATCTGA

Function

symbol description
lrrc51 Located in nucleus.

NR:

description
leucine-rich repeat-containing protein 51-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039787902.1 False 1981 mRNA 0.39 5 26873250 26876714
XM_039787912.1 True 1985 mRNA 0.39 5 26873250 26877133
XM_039787921.1 False 1983 mRNA 0.39 5 26873250 26877133
XM_039787930.1 False 1923 mRNA 0.39 5 26873250 26876708

Neighbor

gene id symbol gene type direction distance location
sfrp2l LOC104968278,LOC103371952,LOC103378548 coding downstream 3691 26864536 ~ 26869559 (-)
tomt tomt,LOC104968284,LOC102290535,LOC100705770,LOC103372127,LOC106927839 coding downstream 9242 26861807 ~ 26864008 (-)
folr LOC102204051,LOC104968280,LOC102291363 coding downstream 17014 26852477 ~ 26856236 (-)
inppl1a inppl1 coding downstream 25299 26819084 ~ 26847951 (-)
stard10 stard10 coding downstream 110521 26748258 ~ 26762729 (-)
naalad2 folh1b coding upstream 42502 26919635 ~ 26938436 (-)
tyr tyr coding upstream 89211 26966344 ~ 26972566 (-)
fzd4 fzd4 coding upstream 283310 27160443 ~ 27170378 (-)
LOC120553392 NA coding upstream 370100 27247233 ~ 27256996 (-)
pdgfd pdgfd coding upstream 530628 27407761 ~ 27480066 (-)
G19788 NA non-coding downstream 11943 26859783 ~ 26861307 (-)
G19700 NA non-coding downstream 313581 26487858 ~ 26559669 (-)
G19665 NA non-coding downstream 460676 26311617 ~ 26412574 (-)
G19685 NA non-coding downstream 464502 26407288 ~ 26408748 (-)
G19660 NA non-coding downstream 562579 26307737 ~ 26310671 (-)
G19811 NA non-coding upstream 28040 26905173 ~ 26908000 (-)
G19832 NA non-coding upstream 136515 27013648 ~ 27021216 (-)
G19851 NA non-coding upstream 244638 27121771 ~ 27122407 (-)
G19874 NA non-coding upstream 340609 27217742 ~ 27218190 (-)
G19876 NA non-coding upstream 350118 27227251 ~ 27227489 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other downstream 403354 26451380 ~ 26469896 (-)
LOC120570434 fam124b other downstream 427315 26434281 ~ 26445935 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other downstream 538531 26307064 ~ 26334719 (-)
trip12 trip12 other downstream 783548 26041295 ~ 26089702 (-)
G19270 ptx3 other downstream 2620337 24248031 ~ 24252913 (-)
G19840 NA other upstream 211473 27088606 ~ 27089064 (-)
cwf19l2 cwf19l2 other upstream 947472 27824605 ~ 27847548 (-)
G20417 scarf1 other upstream 2570037 29447170 ~ 29448655 (-)
im:7138535 NA other upstream 3090296 29967429 ~ 29972350 (-)
rnf26 rnf26 other upstream 3210602 30087735 ~ 30091711 (-)

Expression


Co-expression Network