LOC120551059


Basic Information

Item Value
gene id LOC120551059
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 7983094 ~ 7986427 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039788203.1
ATGTTTTCAGATTTTCTTGCTTCATGCCAGCGAAAAGTCAAATCCAAGTCACAAaagaagttccagtgtgtgtttgaggggattgctaaagctGGACACCCATCCCTTCTGAAtaagatgttcacagagatctacatcacaGATGGAGGGACCACAGCAGTCAatgatgaacatgaggtcagacgGATTGAAATAGCATCCTGGAAACCAcacagaccagaaacaacaatcagatatgaagacatctttaaaaccccacctggaagagatgaaccaatcagaacagtgatgacaaagggtgtggctggcatcgggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaggccaaccaggacatccagttcacatttacattcaccttcagagagctgaataTGCTGAAAGAGAAAGTGttcagcttggtggaacttgttcatcgcttctttagtgaaaccaaagaagcaggaatctacaggtttgaagagttccaggttgtgttcatctttgatggtctggatgagtgtcgacttcctctggacttcctcaacactgagatcctgactgatgttactgagtccacctcagtggatgtgctgctgacaaacctcatcagggggaatctgcttccctctgctcgcctctggataaccacacgacctgcagcagccgaTCAGATCCCTTctgagtgtgttgacatggtgacagaggtcagagggttcactgacccacagaaggaggagtacttcaggaagagattcagagatgaTGACcaggccagcagaatcatctcccacatcaagacatcacgaagcctccacatcatgtgccacatcccaatcttctgctggatcactgctacagttctggagaatgtgttgaagaccagagagggaggagagctgcccaagaccctgactgagatgtacatccacttcctaGTGGTTCAGTCCAAACGGAAGAATGTAAAGTATGATGGAGCAGCCGAGACAGATCCACACTGGAGTCCAGACACCAGGAAGATGATTGAatctctgggaaaactggcttttgagcagctgcagaaaggcaacctgatcttctctgaatcagacctgacagagtgtggcatcgatatcaCAGCAGCCTCAatgtactcaggagtgttcacacagatctttaaagaggagagtggactgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctggctgctcttcatgttcatctgacattcaccaactctggagtcaacctgctgtcagaagaacaaacaacatcaacacagttctaccagagtgctgtagacaaggccttacagagtccaaatggacacctggacttgttcctccgcttcctcctgggtctttcacaAGAGACCAATCAGAATCTCCTACGAGGTCTactgacacagacaggaagtatgtcagagacaaacaacaaaacagtcaAGTACATCAAGAATAAGATGGATGAGAATCTGTCTccagagagaagcatcaatctgttccactgtctgaatgaactgaatgatggtTCTCTAGTGGAGGAGATCCAATGGTACCTGAGATCAGGAAGTCTCTCCATagataaactgtctcctgctcagtggtcagctctggtcttcatcttgctgtcatcagaaaaagatctggacgtgtttgacctgaagaaatacaatgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctGTTAAGTGGCTGTAACCTGACGGAGAGAAGCTTTGAAGCTCTGTCCAAAGTtgtcagctcccagtcctctagtctgagagagctggacctgagaaACAACGatctgcaggattcaggagtggaGCTGGTGTCTGCTGGattgaagagtccacactgcagactggaaactctcagTCTGAGTGGCTGTacactgtcagagagaagctgtgaagatctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaaaaACGACCTGCAGGACTCCGGAGTGGAGCTGGTGTCTGCTGGATTGAAGAGTCCAAactgcagactggaaactctcagtctgtcaggctgtatGATCTCAGAGAAAGGCTGTATatctctggcctcagctctgaggtccaacccctcccatctgagggAGCTGGACCTTACCTATAATCATCCTGGAGAATCAGGAGTGGAGCTGCTGTCAGCAGGACTTAAGGATCCTATCTGgagactggaaactctcagGATGGACAATGGTGGACCACAGAGGTTGAAACCTGGTGTgaggaagtgtgagtgtgttttaagtcagatttatttcattcatgaaTTGTCAGGGTAAATGCACATTGATCAACATCCCTGTAAATTGGCCAAAAGGCTAATTTTCACCTGTTGTTCCTCTGCCTgatgttaaatataaaaaataaaataattaggaTCAATCAAattgatcttgattcgtagcCTCTGTTAAGAGTAGGGGAAATACGATGCCACGACCGagcggaccaatcacagtctgCGTCAATATAACGTGTAGTTACGTGTTTGAGAGATGCAAGAATCTGCAATCAACATTGTGATGATGTCCATTATCTCTGTCAATTTaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039788203.1 True 2665 mRNA 0.47 5 7983094 7986427

Neighbor

gene id symbol gene type direction distance location
LOC120551046 LOC106510929 coding downstream 268057 7712652 ~ 7715037 (-)
trnag-ucc NA coding downstream 473023 7510000 ~ 7510071 (-)
polr2d polr2d coding downstream 473949 7495033 ~ 7509145 (-)
LOC120543849 NA coding downstream 570587 7398193 ~ 7412507 (-)
LOC120544032 NA coding downstream 715380 7262974 ~ 7267714 (-)
LOC120543635 NA coding upstream 36201 8022628 ~ 8063341 (-)
LOC120543856 NA coding upstream 92797 8079224 ~ 8098464 (-)
LOC120543874 LOC101482597,LOC103360230,LOC107102854 coding upstream 383342 8369769 ~ 8392277 (-)
LOC120543728 NA coding upstream 636055 8622482 ~ 8638087 (-)
LOC120543940 NA coding upstream 696236 8682663 ~ 8684484 (-)
G15353 NA non-coding downstream 82974 7872052 ~ 7900120 (-)
G15339 NA non-coding downstream 85190 7774441 ~ 7897904 (-)
G15356 NA non-coding downstream 96162 7886560 ~ 7886932 (-)
G15346 NA non-coding downstream 110031 7817442 ~ 7873063 (-)
G15350 NA non-coding downstream 125936 7848994 ~ 7857158 (-)
LOC120544065 NA non-coding upstream 85165 8071592 ~ 8072887 (-)
G15403 NA non-coding upstream 133088 8119515 ~ 8125709 (-)
G15428 NA non-coding upstream 268446 8254873 ~ 8255584 (-)
G15430 NA non-coding upstream 273724 8260151 ~ 8260686 (-)
G15439 NA non-coding upstream 338394 8324821 ~ 8325783 (-)
trnaa-cgc NA other downstream 46767 7936256 ~ 7936327 (-)
lrch3 lrch3 other downstream 639201 7309914 ~ 7343893 (-)
LOC120544114 NA other downstream 771728 7207735 ~ 7211366 (-)
LOC120543599 LOC102193948,LOC103360213,LOC102310147,LOC107834023,LOC106944350,LOC103473932 other downstream 783555 7142729 ~ 7199539 (-)
rpl35a rpl35a other downstream 846932 7129626 ~ 7136162 (-)
LOC120551075 LOC103475274,LOC105922519 other upstream 150874 8137301 ~ 8155303 (-)
G15757 NA other upstream 481930 8468357 ~ 8469760 (-)
G15771 NA other upstream 615490 8601917 ~ 8656963 (-)
LOC120544569 dgkd,LOC102780004 other upstream 705647 8692074 ~ 8742123 (-)
spint2 NA other upstream 894011 8880438 ~ 8914977 (-)

Expression


Co-expression Network