LOC120551211


Basic Information

Item Value
gene id LOC120551211
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 10455757 ~ 10464353 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039788464.1
tctctcttctccagaCTCTGTCAGGCTGGTGAATGGGACTAGTCTGTGTTCAGGCAAACTGGAGGTGAAGTCTAACCAGTCTAACCAGTCgtggtcctcagtgtgtgaagatGACTTTGACCTGCAGGATGCAAAGGTGGTCTGCAGGGAGCTTGGCTGTGGTTCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGACATGGaggctccagtgtggaccaaagAGTTCCAGTGTAGAGGCCATGAGTCTGCTCTGCTGGACTGTGACAGCTCAGATAGAAACACCTGCTCTTCTGGCAAAGCTGTTGgactcacctgctcagAGCCCGATAATTTCCAGTTGGCGAGAGGATCCAGTCGCTGTGCTGGTGAACTGGAGATGAAGAAAGAGGGATGGTGGAGTAAAGTGGATGTTGATGATCATTCTGCCTGGAATCTAAAGGCAGCAGATGTAGTGTGTAGACATCTTGACTGCGGCTCTGCTGTTTCATCAGGGTGGAAAAAGATGGATTACTACATAGGAACATGGAGGATTAGATCAACTTGTCTTCAATCCAAGTCTGCAGTTAGGGAGTGTATATCAACAAAGTCTTACACTTCCTTTTCCAAACTGGAGATCAACTGCTCAGACTCTGTCAGGCTGGTGAATGGGACTAGTCTGTGTTCAGGCAGACTGGAGGTGAAGTCTAACCAGTCTAACCAGTCgtggtcctcagtgtgtgaagatGACTTTGACCTGCAGGATGCAGAGGTGGTCTGCAGGGAGCTTGGCTGTGGGGCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGACATGGaggctccagtgtggaccaaagAGTTCCAGTGTAGAGGCCATGAGTCTGCTCTGGTGGACTGTGACAGCTCAGATAGAAACACCTGCTCTTCTGGCAAAGCTGCCGgactcacctgctcagAGCCTGATGATGTCAGGTTGTCAGGAGGAGCCAGTAGCTGTGCTGGTACGCCAGAGATGAAACAACAGGGACAGTGGAGACCAGTGACTGACTGGGATACTGAATGGGACCAGAAGTTATCATCTGCAGTGTGTAAACGGCTGGACTGTGGTTCTGCTGTTTCCACAAACATCAGCAGCAGCTCTTCAGAAACACCTGTTTGGGGGATCAGTCGTTCTTGTGTTCagtctgattggctagtacggGAGTGTTTATGGTTAACAGGTTACAGGAAAAGCCCCAAGAACCTGGAGGTGGTCTGCTCAGATTTGCTGGCTCAGCCAAACATCTCCTTCTCTACCCACATTGACGGGGTTTCTGAGGCCACGCAGCAGGGGTTGCGAGTTCTCATGGGCTCCGACTTCACCATCAGCTGCTCCGTCCTGCCACAGTACCCAGGAGGCTCCTTCCAGCTCATCTTCAACACCTCTGACCCAGAACAGAAGACATACACCCtgccagctgtcaatcattcaGCCCACTTCCTGTTCTCTGCTGCAGACTCCACCCACCGAGGGGAGTACCGCTGTGTTTATCACCTCTACGCTTTCTCCCATAACTTCTCTTCTGAGAGCCGGCCGCTCCATCTCACTCTCGCAGCCTCTCTAACACATCTGGTCATCAGACTGGTCGTCCTGGTGCTGCTGGTGCTCGTGTCCGGTGCTGCCCTGTTTTGCTACTCCAAGGCCAACAGAGGGCAGACACCAAGACGAGAGGACAACATGGAGGTGCGTTACCTCTGTGGTGCTGATGACTTGCTGGGTGAAGAGGCAGGAGGAGCGCAGGGCTCAGAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039788464.1 True 1774 mRNA 0.53 7 10455757 10464353

Neighbor

gene id symbol gene type direction distance location
LOC120547173 NA coding upstream 10268 10434485 ~ 10445489 (+)
LOC120548947 LOC103372137,LOC102304476 coding upstream 30987 10405189 ~ 10424770 (+)
LOC120550666 LOC105915347 coding upstream 78946 10359389 ~ 10376811 (+)
si:ch211-137a8.4 LOC103372141,LOC107102523,LOC105915351,LOC101172006,LOC106961384,LOC103378353 coding upstream 335918 10055994 ~ 10119839 (+)
trnar-ucu_11 NA coding upstream 571153 9884513 ~ 9884604 (+)
LOC120551226 NA coding downstream 512852 10977205 ~ 10979429 (+)
LOC120553334 NA coding downstream 1071432 11535785 ~ 11540819 (+)
rps3 rps3,LOC102795110 coding downstream 1090299 11554652 ~ 11562928 (+)
LOC120554434 NA coding downstream 1091954 11556307 ~ 11556455 (+)
LOC120554442 NA coding downstream 1093099 11557452 ~ 11557600 (+)
G16103 NA non-coding upstream 61787 10393420 ~ 10393970 (+)
G16101 NA non-coding upstream 67769 10387672 ~ 10387988 (+)
G16048 NA non-coding upstream 260547 10188963 ~ 10195210 (+)
G16044 NA non-coding upstream 270072 10183693 ~ 10185685 (+)
G16033 NA non-coding upstream 289288 10139003 ~ 10166469 (+)
G16115 NA non-coding downstream 37178 10501531 ~ 10553760 (+)
G16125 NA non-coding downstream 195500 10659853 ~ 10660419 (+)
G16171 NA non-coding downstream 552022 11016375 ~ 11016658 (+)
G16176 NA non-coding downstream 727797 11192150 ~ 11192454 (+)
G16178 NA non-coding downstream 794614 11258967 ~ 11259682 (+)
G15712 NA other upstream 452162 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 452385 9866710 ~ 10003372 (+)
G15640 NA other upstream 786228 9598313 ~ 9669529 (+)
G16267 NA other downstream 1430151 11894504 ~ 11900873 (+)
G16467 clns1a,LOC102781126 other downstream 1931642 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 1977777 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 2166321 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 2404477 12868830 ~ 12922469 (+)

Expression


Co-expression Network