LOC120551226


Basic Information

Item Value
gene id LOC120551226
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 10977205 ~ 10979429 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039788488.1
ATGGCAAGAACATGGCAGTGGCCAAAGGAGGAGTGGGCCTATAGATTAATCCCCTGTTTGACCGGAAAAGCCCTGGAGGCCTACACAGCCATGGATGAAGATCGTTCCAACTGCTACCCAGACCTGAGGGAGGCACTGCCTCTACGTACCGCTGGGGTGAGGCCTGAACGAAAGAATAAGGACCAGTTAGGAGAGACCATCATTCTGGAGCAGCTCCTGCAGGTGTTTCCTCCAGACATCAGGATGTGGGTGAGGGAGCATGAACCGGAAGATGGTCTGACGGCAGCAAAATTGGCCCTAAAGTTCCTGAATGCTCGGAGGGGAGCCACATCACGTCCAACACGAGGGGATACCAGGGAGAACATCGGCCATCGAGACAACTTTGAAGGTAATCGTGGGGTGAATGTTAAGGGACAGACTGCTTATTCAGCAATTAAGACTTTAGTGTGCTATCATTGTCAACAGCAGGGACACAAGGCATCTGTTTGCCCCCTGAAGAAACCAAAAGTGACTGGACTATGTTATGTGCCTAGAAAGAGTGACCAGAGTGATCACCAGGACAAGGAAGGGGAATCTAGATCTGTTCCAGTTAAAATTAATGGCAAGCCTGTAACTGCTCTCCTTGACTCTGGAAGTTCTATGTCATTCATAAGAAAAAGATACGTGCCGTGTACTATTGACTACAGTCAGCAGACAGAGGTGTTATGTGTACATGGTGACTGTAAGCCAGAGCCACAGGTAGAACTGATAGTTGAGGTGGATGGGCAAAAGTATCTGATGACAGTGGGGGTGGTGGAGAACTTACCAGTGGAGATGCTTTTGGGGAGGGATTTGCCTGTGTTATATGACCTCCTAAGCAAAGGTAACAGTCTTGCTAGAGCTAATGAACCTCTGTCAGAACCAAAAATGCATGTCTcttgttttgtcatgacaaggtCTCAGGCAAAAACCAAAGCTCTGTCTGGGCTACAGCCTCTGCCAGACTTATGTGGTAGTCTGTGCAAGGCTGGAACCAAAGGGCCCAGAAAGACACGTCGGCAACGACGTTTAGAGAAACATGCTGGTACACCTGTGACTTGTGAAATGCCTGAAAGTGACTTATCAGATCTTAAGTGGGAGGTGCCAGAGAACGTCGCTGTGTTACAACAGTCTGATCCTGTCTTAAGGTCTGTGTTTACCAAGGTTCTGAACTCTGCTAATCACACGGCCCAAGTGGGTGGTGCAATGTATGTTCTGCACAATGACATCCTTTATGAGGGGGAGGAGCCAGGTAGCAGGAGGTTAGTGGTACCAGGTAAATGCAGATCATTAGTACTACACCTTGCACACACCATTCCATGGGCAGGACACTTAGCACACTATAAGACATATCTCAGGTTGGCCTCTCGGTTCTTTTGGCCTTCAATGTATACTGATGTGCAGACGTATTGCAAAACATGCCCAGAGTGTCAGAAAACCAGTGCTGTCCGCATCCCGGAAGAGATCTTGACCGACCAGGGAACCAACTTTACATCCAACTTGATGAAACGGCTGCATAAGGAGTTGGGCATTACTGCAATCCGGACCTCTCCGTATCATCCTGAGACGGATGGTTTGAGAAGTACCGCAGCGTCCACCGGATTCTCACCATTTGAGCTGCTTTATGGATGGCCAGTCCAGGGCCCCTTGGATCTGCTGAAACAGAACTGGGAGGAGAAAGTGACTGATAAAGCTGATGAGGGGAAAGGTGTTGTGCAATATGTCCTCCAAATGAGGGACCGGGTTGGAGCAGTACCGGAGGAGGCGCAGACATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039788488.1 True 1794 mRNA 0.49 4 10977205 10979429

Neighbor

gene id symbol gene type direction distance location
LOC120551211 NA coding upstream 512852 10455757 ~ 10464353 (+)
LOC120547173 NA coding upstream 531716 10434485 ~ 10445489 (+)
LOC120548947 LOC103372137,LOC102304476 coding upstream 552435 10405189 ~ 10424770 (+)
LOC120550666 LOC105915347 coding upstream 600394 10359389 ~ 10376811 (+)
si:ch211-137a8.4 LOC103372141,LOC107102523,LOC105915351,LOC101172006,LOC106961384,LOC103378353 coding upstream 857366 10055994 ~ 10119839 (+)
LOC120553334 NA coding downstream 556356 11535785 ~ 11540819 (+)
rps3 rps3,LOC102795110 coding downstream 575223 11554652 ~ 11562928 (+)
LOC120554434 NA coding downstream 576878 11556307 ~ 11556455 (+)
LOC120554442 NA coding downstream 578023 11557452 ~ 11557600 (+)
LOC120554427 NA coding downstream 580962 11560391 ~ 11560539 (+)
G16125 NA non-coding upstream 316786 10659853 ~ 10660419 (+)
G16115 NA non-coding upstream 423445 10501531 ~ 10553760 (+)
G16103 NA non-coding upstream 583235 10393420 ~ 10393970 (+)
G16101 NA non-coding upstream 589217 10387672 ~ 10387988 (+)
G16048 NA non-coding upstream 781995 10188963 ~ 10195210 (+)
G16171 NA non-coding downstream 36946 11016375 ~ 11016658 (+)
G16176 NA non-coding downstream 212721 11192150 ~ 11192454 (+)
G16178 NA non-coding downstream 279538 11258967 ~ 11259682 (+)
G16180 NA non-coding downstream 315418 11294847 ~ 11295519 (+)
G16181 NA non-coding downstream 316145 11295574 ~ 11295932 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 471867 10388232 ~ 10505338 (+)
G15712 NA other upstream 973610 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 973833 9866710 ~ 10003372 (+)
G15640 NA other upstream 1307676 9598313 ~ 9669529 (+)
G16267 NA other downstream 915075 11894504 ~ 11900873 (+)
G16467 clns1a,LOC102781126 other downstream 1416566 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 1462701 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 1651245 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 1889401 12868830 ~ 12922469 (+)

Expression


Co-expression Network