LOC120551249


Basic Information

Item Value
gene id LOC120551249
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 11871928 ~ 11883024 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039788519.1
CCGACACGACCATCAGCTGATGTGTGTTCTGAACATTCAGAGGACACCATACACAGGTTCCAAAATGTTAACCAGGTGGTTAACGTTCACAGCTTTTTTGGCCGCTTCAGCGAATCCAGAAAGAGCAGGTATTGGCCGGGCCGCTGCGGCCGTCGCACCTACCCGCGGGGTCAAAGGTCGTCCAGGGGAAGAGCTGACGTTAAACTGTGGAGACGGAACCGACGCAGGTGAGGTGCAGTACTGGCACACCCCCTTTGGAGACGTCCAGCCCTCGGGGTTCCACAGCGAACTGGACCCTGTGTTCATGCACCCTGACGGGAGCTTGGCGCTCCCCAACAGCAGCGTGCTACACAGCGGCCTGTACTACTGCCTCCTGCAGCACGCAGAGGGAGCTACGCTGTGGCCGTACCAGCTTCATGTCGGCCCCGAGGACCTAGAGCGCCCCGAGTATAGGCAGGGTGATGCGTTCAGGTTCGGGAGGGATGTCGGGTCCGTGGAGGAGAGGCAGGCAGCAGATGTTTCCGAGGGGCAGTTTGCAGCAGCGGTAGCGGCATCGGTGCTGCTGACGTTTGTGCTGGGCTTCAGCGCCGGAGCTCTGGCCAGGACTCATGTTCTCAGGTGTTTAGGGGCGGTCGCTACTAGGTTACGATCGCCACGGAAACGATGCCAAACTGACAAGCGGGACCACGGCAGCACTGGGGTCACCGTGACAACCCTGTCGGCCACGCACGGCGCCGATCAGGCCTTCGAGATGGCAACCAccaccacacccccccccaacaaacCTCAGAGAAGCTTCCGGCAGAAACGACAGGAGGAGACCACGGCCGACCTGGAGGGATGTGACCACGGGAAAgacggagagaaggagaaaacggaggagggagggagaggtcTGACGGAAATGAACAAAGGGTGtgaggtggaggaagaggagggaagagagtTCAGAGGTTTTGATCTATCAGGGGTGGATGGAGGGAGTCAAACGGGAAGAGGAAATGGAAAGGAGCGCAGTGAGAAAGATGGGAGAGAAAGCacggaggaaaagaaagaatggAGGCAGgcagaggtggaggaggtggatgaGAATAGGAGCAAGGAGGATGGAGAAGAGAGTAAaaGTTTCAGCGACAATCAGCTGATACAATACAGCAGATGGCACTTCACCAACTTTATCAATCTGATTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039788519.1 True 1192 mRNA 0.58 6 11871928 11883024

Neighbor

gene id symbol gene type direction distance location
ompa omp,LOC102310369,LOC101166404,LOC105930201,LOC106535736 coding upstream 38564 11829812 ~ 11833364 (+)
LOC120550461 NA coding upstream 258706 11592428 ~ 11613222 (+)
LOC120550095 NA coding upstream 284667 11580446 ~ 11587261 (+)
kctd14 kctd14 coding upstream 298702 11565261 ~ 11573226 (+)
LOC120554420 NA coding upstream 309524 11562256 ~ 11562404 (+)
LOC120550284 LOC106522765 coding downstream 74872 11957896 ~ 11973180 (+)
LOC120550300 LOC107727921,LOC103377937,LOC107661103,LOC100710678,LOC101484592 coding downstream 127652 12010676 ~ 12031804 (+)
LOC120550190 LOC103358193 coding downstream 162591 12045615 ~ 12056544 (+)
aamdc aamdc,LOC102795396 coding downstream 190594 12073618 ~ 12077875 (+)
LOC120550138 NA coding downstream 261275 12144299 ~ 12173696 (+)
G16250 NA non-coding upstream 52656 11818880 ~ 11819272 (+)
G16237 NA non-coding upstream 59543 11754374 ~ 11812385 (+)
G16229 NA non-coding upstream 100245 11689220 ~ 11771683 (+)
G16235 NA non-coding upstream 118947 11734398 ~ 11752981 (+)
G16207 NA non-coding upstream 336627 11535088 ~ 11535301 (+)
G16270 NA non-coding downstream 17017 11900041 ~ 11912680 (+)
G16280 NA non-coding downstream 85170 11968194 ~ 11970005 (+)
G16283 NA non-coding downstream 98116 11981140 ~ 11982906 (+)
G16292 NA non-coding downstream 129474 12012498 ~ 12027627 (+)
G16293 NA non-coding downstream 139197 12022221 ~ 12029125 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 1366590 10388232 ~ 10505338 (+)
G15712 NA other upstream 1868333 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 1868556 9866710 ~ 10003372 (+)
G15642 NA other upstream 2203449 9645137 ~ 9668479 (+)
LOC120551159 fam13c other upstream 2219097 9631391 ~ 9652831 (+)
G16267 NA other downstream 11480 11894504 ~ 11900873 (+)
G16467 clns1a,LOC102781126 other downstream 512971 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 559106 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 747650 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 985806 12868830 ~ 12922469 (+)

Expression


Co-expression Network