acsl3a (acsl3)


Basic Information

Item Value
gene id acsl3a
gene name acsl3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 18340612 ~ 18370457 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039788733.1
CTCCCCCCGTCGCTCCCAAACCGCCATCCATCCTTGGTACAGCAGCAACCATACAGCAACACAACGCCAACGCGCTTGTCACTTCCGGGCTCAGATTGCAGAGTTCAATCAACGCTATGAATTAGAGCTGTCCGCTGCTGTAGTCTGGATGAACTGACACCTGTGcAGTGTGGACCTGTGGGCATATCATTGCCAGGAACTACGATTCAAGCTCTCTGAAAGAAAGCaagaaggaagagaaggggacagaagaaaagagggaCTGACTTCAGCTGTAGGAGTTGGAACTTTTTCTCACAACTCGTCTTCCTCCatactctctcctctctgctctccaACATCTTTGTAGCTTCACCAAGATGAAGCTGAAGGAGGACCTGAACCCcatgctgctgctcctcttccACCTCATGGTATGGATCTACACCTTCATCACCTTCATGCCCTCTTACATCCTCAGCTGGGTCTCCAGACCCGACGTGGGCTGCTGCGGCTCCGAGGAGGAGCGAGCCAAGAAGATGAAGGCCCTCTCGGTGCTGGGATGTCCCGAGGGACCATACCGAGCTGTGAGTGCCACTAAGAGGTTGGCGACGTCACTGCACCCAGGAGTGGACACCTTGGATAAGATGTTTGAGGACGCAGCCATGAGGTTCCCACACCGAGACTGTCTCGGGACGAGGGAGGTGATCAGTGAGGAGGATGAGCGACAGAGCAATGGAAAGGTGTTCAAGAAGGTAGTTTTGGGAGAGTACTGCTGGCTCTCCTATGCGGAAATCCTCACAGCAGCATCCCAACTGGGCAGCGGTTTGGCATTACTAGGTCAGCAGCCAAAAAACAATGTTGCCATCTTCTGTGAGACACGGGCCGAGTGGATCATTGCTGCAGAGGCATGCTTCATGTACAACTTCCCATTGGTCACCCTTTACTCCACGCTGGGAGGTCCAGCCATTGCTCATGGGCTGAATGAGACTCAGGTCACCCTTGTCATCACCAGCAGAGAACTCCTGGAGACCAGACTCAAGgctaTCCTTATTGAAGTTCCGAGACTGCAGCATATCATTGTAGTGGATAACACACCAACCTCGTGGCCCGGCTATCCACGTGGCATCAGTGTCCACAACATGGCTGCCGTTCAGAAGCTGGGAGCCAGGCCTGAGAATGCCGCACGTGAGCGCAAGCCGCCGCTGCCTTCAGAAATTGCAGTCATCATGTACACCAGTGGATCCACAGGCATACCAAAGGGCGTCATGATCTCCCATAGCAACATCATCGCTTGCATCACAGGCATGGCTGAGCGGATACCCAACCTGTGTGAGGAGGACACCTACATTGGCTACCTGCCTCTCGCCCATGTACTGGAGCTCAGTGCAGAGCTCGTATGTTTTTCTCATGGCTGTAGGATTGGTTATTCCTCACCTCAGACTCTAGCTGACCAGTCAACCAAGATCAAGAAAGGAACCAAGGGGGACGCCAGCGCACTGCAGCCCACTCTGATGGCAGCTGTCCCAGAGATCATGGATCGTATCTATAAGAACGTGATGACCAAGGTGGAGGAGATGAACTGTGTCCAGAGAACACTCTTCATTCTGGCATACAACTACAAACTGGAGCAGCTTGCCAAAGGATACAGCACACCTCTATGTGACAAGCTGGTGTTCAGGAAAGTTACACgctttttcaGGCTTTCATTGCCAACACATTTGTCAAATAATGGAAATACTCCCAGCCTTTCCCAGGACAGACTAAACCAACAGAGCGGCCCGCTGCCTGTCACTCTCCACTGCGGTCAGCAAAACATTGTTTTGTGGACATTCCTTTGGGATGGGGTTTCCATGGCGAGGGAACAAGTGTGGTTGTGTTGCAATGGTAATAAATGTCATACCTTGATGCTACGGTGCTTTCTGAtcacgtgtgtgtgttcgttATGTGTTCTAGTGTGGGATTACAGCACTGGGAGAGTGGGAGGGCCGCTGGTTTGCTGTGAAATCAAGCTCAAAGACTGGGTGGAGGGTGGTTATCGTAGAACTGACAAGCCACATCCAAGAGGAGAGATTCTGATTGGGGGACCCAACGTAACCATGGGATACTACAAGAACGAGGCGAAAAACCAAGATTTCTTTGTCGATGAGAACGGCCAGCGGTGGTTCTGTACCGGAGACATCGGAGAGTTTCAAGAAGATGGGTGCCTCAAGATAATTGATCGTAAAAAAGACTTGGTGAAGCTGCAGGCAGGAGAGTACGTCTCCCTGGGAAAGGTGGAGGCCATGTTGAAGAACTGCCCTCTGGTCGAGAACATTTGTGCCTATgccaacagTGACGAGACATACGTGATTGGCTTTGTGGTGCCCAATCAGAAGCAGTTGCTGGCTCTGGCTGACCAGTACGGTATTCAAGGCACACGGGAGGAGCTGTGCGAAAGTAAGGTCATGGAGGAGCTGGTCCTCAAGATCATCACTGAGGCTGCTCTAGCAGGTCAGAGGAGGTTAAAGAAGAGGTTTTACtgtgttgaattttttttttGTGTATGA

Function

symbol description
acsl3 Enables long-chain fatty acid-CoA ligase activity; protein domain specific binding activity; and protein kinase binding activity. Involved in several processes, including positive regulation of phosphatidylcholine biosynthetic process; positive regulation of transport; and very-low-density lipoprotein particle assembly. Located in several cellular components, including Golgi apparatus; lipid droplet; and perinuclear region of cytoplasm. Implicated in asthma; breast cancer; and prostate cancer. Biomarker of breast cancer; lung cancer; and prostate cancer.

NR:

description
PREDICTED: long-chain-fatty-acid--CoA ligase 3

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039788733.1 True 2528 mRNA 0.52 16 18340612 18370457

Neighbor

gene id symbol gene type direction distance location
kcne4 kcne4 coding downstream 3097 18335196 ~ 18337515 (-)
scg2a NA coding downstream 33085 18304115 ~ 18307527 (-)
dhrs12la LOC102209276,LOC100699243,LOC101076961 coding downstream 41852 18288287 ~ 18298760 (-)
psmd2 psmd2,LOC102798368 coding downstream 104096 18224512 ~ 18236516 (-)
alp3 LOC103377813,LOC108248287 coding downstream 169667 18157115 ~ 18170945 (-)
sgpp2 sgpp2,LOC103365078 coding upstream 28344 18398801 ~ 18414141 (-)
pxylp1 pxylp1 coding upstream 405716 18776173 ~ 18797083 (-)
LOC120547915 clstn2 coding upstream 522349 18892806 ~ 19141693 (-)
LOC120552541 NA coding upstream 794931 19165388 ~ 19166277 (-)
LOC120552522 NA coding upstream 797590 19168047 ~ 19169126 (-)
G17782 NA non-coding downstream 491593 17844434 ~ 17849019 (-)
G17745 NA non-coding downstream 584180 17756168 ~ 17756432 (-)
G17739 NA non-coding downstream 647344 17692996 ~ 17693268 (-)
G17716 NA non-coding downstream 867666 17472679 ~ 17472946 (-)
G17714 NA non-coding downstream 873121 17465020 ~ 17467491 (-)
G17917 farsb,LOC102796683,LOC102210931 non-coding upstream 12702 18383159 ~ 18383539 (-)
G17936 NA non-coding upstream 222518 18592975 ~ 18593673 (-)
G17964 NA non-coding upstream 378741 18749198 ~ 18749401 (-)
G17986 NA non-coding upstream 784505 19154962 ~ 19155251 (-)
G18002 NA non-coding upstream 860462 19230919 ~ 19234457 (-)
LOC120545639 eif4g1 other downstream 117719 18179013 ~ 18222893 (-)
zgc:165508 fam131a,LOC102799247 other downstream 188644 18127466 ~ 18151968 (-)
LOC120552194 NA other downstream 449951 17799999 ~ 17890661 (-)
xaf1 LOC107094331 other downstream 861709 17472947 ~ 17478903 (-)
G17597 NA other downstream 1409618 16848161 ~ 16930994 (-)
fbxo46 fbxo46,LOC102786997 other upstream 1330770 19701227 ~ 19717307 (-)
si:ch211-11n16.2 LOC104927205,LOC101481481,LOC100694251,LOC103369702,LOC107094496 other upstream 1430294 19800751 ~ 19810130 (-)
LOC120547993 NA other upstream 1766615 20137072 ~ 20141538 (-)
si:ch1073-340i21.1 NA other upstream 2723720 21094177 ~ 21097201 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other upstream 2866731 21237188 ~ 21261923 (-)

Expression


Co-expression Network