LOC120552187 (LOC104967580,LOC102298130,LOC100699189)


Basic Information

Item Value
gene id LOC120552187
gene name LOC104967580,LOC102298130,LOC100699189
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 37630312 ~ 37639613 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789987.1
tgcgcagaaccgCCAAGTAGCACATCTCGATAGGTAGCATAGATCGATAGAACACCCGGCTGTGATGGACCGCTGGAAGGGCAGAGTGGCTTTGGTGACCGGAGCCTCGGTCGGGATAGGGGCGGCCATAGCTAAAGAGCTGGTCCGGTACGGTATGAAGGTAGTGGGCTGTGCCAGGGACGTCGAAAAAATACAGAAACTGTCAGATGAGTGTCAAAGTACAGGCCACAGTGGTGTGTTGGTACCTTTCAAGTGCGACTTGAACAACGAGGAAGAGATTCTGTCCATGTTCGCTGCCATCAAAGCGCAGCACAAAGGGGTGGATGTGTGCATCAACAACGCTGGCTTGGCTCATCCAGAGTCACTGTTAAATGGCAACACCAGTGGCTGGAAGAACATGATGGATATCAACGTTCTTGCATTGTGTATATGCACACGTGAAGCATATCAGTCAATGAAAGAAAGAAGTGTTGACGATGGGCACATCATAAACATAAACAGCATGAGTGGACATCGTGTAGTACCCAGTACTGATGTACATTTCTACAGCTCCACCAAGTACGCTGTGACGGCCCTGACCGAGGGCCTGAGACAGGAGCTGCGTGAGGCCAAAACCCACATCAGAGCCACATGTATTTCTCCTGGTGTAGTAGAGACTGAATTTGCTCCTCGGCTCTACAGAGACAATGCTGATAAAGCTGCTGCTTCATATACTAAATTTAAGCCTTTGGAAGCAATAGATGTTGCTAATTCGGTTACTTACGTCCTAAGTGCCCCTCCCCATGTCCAgATTGGGGACATTCAGATGCGACCTGTGGAGCAGGTGTTGTAGTTCTGCACCATACAGACACATTCTTCCTCCCACTGGTTTACTACAATGACTATCTGATCATGGAATAAGTTTGGTATTTTGTACTATAACTTTgcacttaaataattaaaagattTTGAAGATATTTGTTGCCCTTCAACTTAATTATTATACAGAAGGAAATTAGATTTGTAGCTCGGCAAGAACCATTTGGACCACAGGGATTGTTCCAGTGACAGCAGGGTCCGCTATGGGGACTGCCATTGGTGTCCAATTGTTGTCAAAAAGTTTTTGTCAGaaagaatacaaaaaatacacaaataataagaacatgaaaatatatatttaaagatCTTTTACATTTCTATCAGTAAAATATCCAGGAGAAAAGCTTCAATCTTCAATCCAAAAAATATTAGTAAATCATCCAACAAAATTGTTTGTGAAATATTaagaacaaaacaaatctgtaatATATACCcccaaaaactgtaaaatatcgTAACAAAATGTAGTAAAATATATTACTAAAATATGTGAAAATGATCGCATATGTCTGcgctttatttttagtttagggtcaattagcaaatgttagcatgctagcaccCTAAACAAAGATTGTGACCATGGTAAATTACACTTGCTTctcatcagcatgttagcattgtgaTTGTGAGCATGTTGCCATACTGACGTTAGCGTTTAGCTTACAGTACTTCTGTGCTCAttcacagcctcacagagcagcTAGCAGCTGTAGACTCTCTGTTACTCAATAAATGAATGATTCACGGAA

Function

NR:

description
PREDICTED: dehydrogenase/reductase SDR family member 11-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K15890 FOHSDR; NADP+-dependent farnesol dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789987.1 True 1610 mRNA 0.42 7 37630312 37639613

Neighbor

gene id symbol gene type direction distance location
zgc:174895 NA coding downstream 31370 37584241 ~ 37598942 (-)
nek8 nek8 coding downstream 63689 37546734 ~ 37566623 (-)
traf4a traf4 coding downstream 84799 37503426 ~ 37545513 (-)
dusp14 dusp14 coding downstream 200680 37416322 ~ 37429632 (-)
mrm3a NA coding downstream 424313 37201098 ~ 37205999 (-)
camkk1b LOC103356711,LOC100697126,LOC101483702 coding upstream 35853 37675466 ~ 37686401 (-)
c2cd3 NA coding upstream 70171 37709784 ~ 37730742 (-)
or95a1 NA coding upstream 107133 37746746 ~ 37747713 (-)
LOC120548891 NA coding upstream 131934 37771547 ~ 37772536 (-)
LOC120551756 NA coding upstream 136061 37775674 ~ 37776606 (-)
G22321 NA non-coding downstream 63857 37566234 ~ 37566455 (-)
G22320 NA non-coding downstream 64137 37565863 ~ 37566175 (-)
G22308 NA non-coding downstream 203008 37423842 ~ 37427304 (-)
G22291 NA non-coding downstream 254007 37373188 ~ 37376305 (-)
LOC120545348 NA non-coding downstream 354444 37273186 ~ 37275868 (-)
G22371 NA non-coding upstream 28026 37667639 ~ 37667944 (-)
G22458 NA non-coding upstream 262643 37902256 ~ 37903681 (-)
G22462 NA non-coding upstream 266749 37906362 ~ 37910118 (-)
LOC120575673 NA non-coding upstream 664193 38303806 ~ 38351320 (-)
G22520 NA non-coding upstream 712769 38352382 ~ 38352586 (-)
tada2a tada2a other downstream 179472 37438986 ~ 37450840 (-)
G22245 dynll2a,LOC107554284 other downstream 360992 37264573 ~ 37269320 (-)
kiaa0753 kiaa0753 other downstream 494471 37112196 ~ 37135841 (-)
dph1 dph1,LOC102789142 other downstream 1080198 36460679 ~ 36550114 (-)
taok1a LOC103356490,LOC104958432 other downstream 1299903 36309917 ~ 36330409 (-)
si:ch211-105f12.2 LOC103368707,LOC107379995,LOC102080198,LOC107090084 other upstream 11846 37651459 ~ 37655795 (-)
LOC120571840 LOC103356713,LOC100701072,LOC102300918,LOC101484608,LOC102193268 other upstream 52825 37692438 ~ 37698139 (-)
p4ha3 p4ha3 other upstream 93228 37732841 ~ 37746282 (-)
robo2 NA other upstream 713411 38353024 ~ 38648599 (-)
LOC120570635 sel1l3,LOC103353588 other upstream 1087895 38727508 ~ 38735823 (-)

Expression


Co-expression Network