kcnj5 (kcnj5)


Basic Information

Item Value
gene id kcnj5
gene name kcnj5
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 22151337 ~ 22179661 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790215.1
caactcacacacacacacacacacacacacaccccccacagaCCCCTCTCACACAGGAGTCGATAGAGAGCGGTGAAGAGCAGAAGGAGCTGGGTGGCAGGAGAGATGCAGGAGGGTTGTTGTTGAATGAACAAAACCAGGAAAGGAGTGCGCAGTCCTGGGGAGAAGAGCAGCTGTGAAATGCCTCGAAGGGAGCCTGCTAACAACTCCTGCAGAGACCTGAAGGTGTTGAGCTTCAGCTGAGGATGGCAGGAGATTCTCGAGTCCTCATGGACCACAACATGGAGATAGGAGTCACACCTGCACAGGTGAAGAAGCTTCCTAAACACTTGCGGGAGGCTCAGATCTCGACAGAGCGAACCCACTTGATTTCTGACCCGGCGAAGAAGCCACGTCAGCGATACGTGCAGAAAGACGGAAAGTGCAACGTTCATCATGGAAACGTGCAAGAGACCTACCGATACCTCAGTGACTTGTTCACTACTCTGGTGGACCTACGCTGGCGTCTTAGTCTCTTCATTTTCACCTTGGTCTATATAGTCAACTGGCTTTTCTTTGGCTTTCTGTGGTGGCTGATAGCACTAATCCGTGGGGATCTGGTGCATGCTGATGAGGAGGGCTGGACCCCCTGTGTGGAAAACCTCAACAGTTTTGTCTCAGCCTTCCTTTTCTCCATTGAAACAGAGACCACCATTGGGTACGGTTATCGTGTAATCACAGAAAAATGCCCTGAGGGTATCATACTGCTTTTGGTGCAGGCCATCTTGGGTTCCATTGTCAACGCCATGATGGTGGGCTGCATGTTTGTCAAGATCTCACAGCCAAAGAACCGCGCCGAGACCCTCATGTTCTCGCACAATGCTGTTATATCGGTGCGAGACAACAAGATGTGCCTGATGTTTCGGGTGGGAGACCTGAGGAACTCTCACATCGTAGAGGCATCGATCAGAGCGAAGCTGATCCGCTCGCAGCAGACCAAGGAGGGGGAGTTCATCCCGCTCAACCAGACTGATATCAACATCGGCTTCGACACGGGAGACGACCGGCTGTTCCTGGTGTCGCCGCTTATCATCTCTCACGAGATCAACCATAAGAGCCCCTTCTGGGAGATGACAATGGCGCAAATCGAGAAGGAAGAGTTCGAGATCGTGGTTATCCTTGAGGGCATGGTGGAGGCCACAGGGATGACATGTCAGGCTCGAAGTTCCTACCTGGACACAGAGGTGCTTTGGGGCTACCGCTTTACACCGGTTCTCTCCCTGGAGAAAGGCTTCTATGAGGTAGACTACAACAACTTCCACGATGTCTACGAAACCAACACCCCCACCTGCAGTGCCAAGGAGCTAGCTGCTAAGCTTCGGGAGGGGCCGCTATTGCCTCAGCTTTCGCTCCGCAGCCCTGAGCCCAAAATGCATACTTTTGACCCCCTAAACCGCATGTCAGAACGGGACCCACTCAGCCCGGATGAGGACAAAGAGGAGAGAGATTCAGGGGGTGACAGAGGAGAGACCAATGGCTCAGCTGCTGCTTTGGAGGATCCACCGCTTGCTGATGGACTGCCTGGCTGATGTGACTGACGGCCACATCAGCTAAAATCCCAGGACAGAGACTGGACAGAAGGACAGGACAATAATGCTTAATTTAGTTAATGGCCAGCTTGTTCCTTTGCAATGCTTGGAGATACAAGACATCCGTCTCCAGCCCCCGACTCATGCAATATTCCTCCACTAGAGTGTCAATTTATAGTATTGATTGGTTTTGTAGACACGTAAgtaacatacacagacacacacgtacagtaTCTATATCTACACTTAAAGGTTGGTGgttcagattttctttttattaccaTAACGACCACTTACTGCTGTAACAGCTCAAGTTGTATAATGTAAACTTGAGCAGAAACTGGTAGCCATGGCAGAGTACCATGGGCTTATTATGGATGCGCCAATATTCTCATTTTAGAGTGTGTTGATTCAGCTGAATTCGAACAGTATCAGTCTCATAACTCAGCTAATGTGTCTGACAGCTTCTGAGTGATAATGGAACCTTGTTATTGATGATTTTTAAAAGTTGTGGGGgattataatttcatttctcTGTCAGTGTTGTTATTATTCTGTGTCAGAAACCCAATTCACCCTGGAGGAAATGTATAGGGCTTCTAGTTTGCATAGGCAGGAGAAGACGTAGGAAATTGTTCTGTAAAAGGCAACGTGTACTGGTAACCACTATCTAAATTTGTTTTCTTACAGTAGTTCACAACTTCCTCATGGTTGTACTGTCGTATATATTTTCATTGAGCCTTGACCCAAAAGAAACCAGCTAGTACCTAATTTTATACTAATTTTCAGGGTTTTGAAATTAACAATAAGAACTAGGCAAATGCTGGCAAACTACTTGACTGTTTAAAGACTTAATTTCCCTTCCCGTTGCAGCAACTAAAACATTAATTCCAAGCCCTTTTCTTGGTACGTAAAGCACAATTTCCTATGAAGTGACTCCACGCTGACCTGACACCTCTGCTACTGGCTGATGCATGTCAGTcctatttacagaaaaagtAGATTCAAATATTTATATGAAACATCAATGCTCAACTGCTATTTGAAATGTTCTTGATTTTTACACACCACACATGAAAATTTCAAATGCTCCATAAGCAAAATGAAATACTcagtggtttgttttgtttttgttttaaacatttaaaagataTCCAACCCTGGTGTTTTTCAGATACATAAAAGTTGAGTCTACAGAAGATAGGAGCAGGTTTTCTGTCTAATCTGACTCTAATCTCAGTTTAGTATTTGGCCAGCGCATTACCTGCAGTATTTGCCTTCTTTGTAATTATTTCCTCTGAACTTTTCACCTTTAGCGTTCACCTCATGAATGGAAGTCTTCTTTGTCCACACACACGTGGTTCAATCTGCACATTGGCCTTGTTCCACAAACCACCCCTGAGTCTTTTGCTTGATATAGTTTATAGCCCTTGTGATCCTGTTTAGGAAGTCGACACATGTCCTGTGAGGGTCATAGCCTACAGTATTCTTTGACTTTTCTTTAAAAGGAGACATGTCAGAGCTTGCATGCATGAATCAACCCCTATGCGTCCCATTTCTGAGTTTGTTTAATACAGTAAGAAATACAGGGTATTTTCTAGGCATGCAAATTATGAGATTTCTACAATATATTATCAGATAATGTATTAGTATTCAATTATcatttgttaaaagaaaaattcCTGATAGTTTAAAATCTTCAACTTCCCAATTCAATGTTAAATcgctttgtttttttacaggcGCTTCTCCAATCAATGTGTTATTTTCACTGTGACATTTTAACATCTTACTATGTATTCCATTTGCTAAACGATCGTTTGTCATTAGCAAGAGATCGTCTTTCATTGCTGGAATGTCAtctgttgtctgtgtgttctcATGGGAATAAACGTAATATGGCCGAAAGAA

Function

symbol description
kcnj5 Predicted to enable inward rectifier potassium channel activity. Predicted to be involved in potassium ion import across plasma membrane and regulation of ion transmembrane transport. Predicted to act upstream of or within potassium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in atrium and cardiac ventricle. Human ortholog(s) of this gene implicated in atrial fibrillation; long QT syndrome 13; and primary hyperaldosteronism. Orthologous to human KCNJ5 (potassium inwardly rectifying channel subfamily J member 5).

NR:

description
G protein-activated inward rectifier potassium channel 4-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015467 G-protein activated inward rectifier potassium channel activity molecular_function

KEGG:

id description
K04999 KCNJ5, KIR3.4; potassium inwardly-rectifying channel subfamily J member 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790215.1 True 3479 mRNA 0.44 4 22151337 22179661

Neighbor

gene id symbol gene type direction distance location
srpra srpra coding downstream 97737 22044181 ~ 22053600 (-)
siae NA coding downstream 356393 21787540 ~ 21794944 (-)
mmp13b mmp13 coding downstream 393158 21754393 ~ 21758179 (-)
gucy2f LOC103357218,LOC100708779 coding downstream 419194 21720989 ~ 21732143 (-)
LOC120572601 NA coding downstream 540699 21608044 ~ 21610638 (-)
fli1 fli1,LOC106612965,LOC103145351,LOC106905187 coding upstream 20473 22200134 ~ 22233779 (-)
smtla NA coding upstream 167650 22347311 ~ 22352582 (-)
LOC120551448 NA coding upstream 609383 22789044 ~ 22799012 (-)
barx2 barx2 coding upstream 681290 22860951 ~ 22871590 (-)
rbm7 rbm7,LOC104959492 coding upstream 695404 22875065 ~ 22882453 (-)
G18758 NA non-coding downstream 3040 22148039 ~ 22148297 (-)
G18669 NA non-coding downstream 272573 21819989 ~ 21878764 (-)
G18626 NA non-coding downstream 455615 21632980 ~ 21695722 (-)
G18631 samsn1,LOC102311369,LOC107374247 non-coding downstream 498471 21651703 ~ 21652866 (-)
G18591 NA non-coding downstream 567934 21527455 ~ 21583403 (-)
G18770 NA non-coding upstream 8602 22188263 ~ 22188687 (-)
G18795 NA non-coding upstream 103342 22283003 ~ 22286209 (-)
G18803 NA non-coding upstream 184610 22364271 ~ 22364495 (-)
G18810 NA non-coding upstream 252892 22432553 ~ 22432962 (-)
LOC120548681 NA non-coding upstream 455916 22635577 ~ 22636410 (-)
LOC120551419 LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978 other downstream 144162 21983302 ~ 22007175 (-)
gdpd5b gdpd5,LOC103357216 other downstream 440974 21664076 ~ 21710363 (-)
LOC120572205 NA other downstream 536091 21610814 ~ 21615246 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other downstream 889414 21237188 ~ 21261923 (-)
si:ch1073-340i21.1 NA other downstream 1054136 21094177 ~ 21097201 (-)
G18885 gramd1b other upstream 959552 23139213 ~ 23148515 (-)
G18948 LOC103474743 other upstream 1066942 23246603 ~ 23252420 (-)
LOC120574680 NA other upstream 1273886 23453547 ~ 23461044 (-)
atm atm,LOC102794456 other upstream 1549827 23729488 ~ 23758826 (-)
slc33a1 slc33a1 other upstream 1622854 23802515 ~ 23809452 (-)

Expression


Co-expression Network