LOC120552522


Basic Information

Item Value
gene id LOC120552522
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 19168047 ~ 19169126 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790658.1
TTTGTTCAAACTGATCTTGAGATATCTGATTTGCGAGCAGACGCAGTTCTTGTGGCTTTGTCGCAGTTACATTCACTCGCCTGCACTTCATATTCCTCAGAAGAGAAACATGTTCAACTGTACATTAGAAAATGGGACGGAGCGAGATATGAGGAACACGCCGTACGCTCCGGTGTTTGGATCTGTAATGATGCTGGGTCTGCCTCTCAATGCTGTGTCGCTGTGGATTCTGTTACGCTGCCACAGCCTCAAATCCCCCAGTGTCGTCTTCATGGTCAACCTGGCCATCTCTGACCTGCTGCTTGTCATCTCCTTGCCCATGAGGGTCTACTTTTACGCCACGGGGACCTGGCCTCTGGGCGATAAGGCATGCATCTGTTTCACAATGCTCTTTCGCAACAACATCCGCTCCAGCTCCATCTTCATCACCTTCATTACCGTGGACCGACTGCTGGCTGTCGTCTACCCTCTGAGGTCACGCCATCTACGAACCACTTCCAACGCCATGAAAGCTGTTGTACTTGTTTGGCTGTTTGTGTTGGTGTGGAACATCCCAGAGAGTGTGGAATTTTCAAGATTTTTAGACAAAAACAATGAATCTACCtgttttgaattttgtcacaaGCTGCCATCTACATTGGCTTATTTTCAGCCTATGTTGGTGCTCACTATGCTCGCAGTCAACATTGTGTCCACTGCTCTGGTGTCTTGGACTCTACACAGACATCTGAATGACTCCGCAAGGATAAACAACAAGGTGAATGTCATGATGATTTTTGCCATGAACCTGATGATGTTCACCGTATTTTTCTTGCCTGTGTCATTGATTGTCATCTTCGAAAGCTGGAGACGTGCTCGCACACCACTGATATGTCTTGCTAGTGTGAACTGCTGTCTGGatcctctgttgtattacttTTCTTTTGATGGTTTCtggaagaggaaagaagatgTGGACACCTCTGTTGCAAGAGAATAGTTTGTGATAACAATAGACAGGGACAGGTGGGGTTAAATACTGTTTAAACAGCattatttgtgtgtggatcTGCAATATAAAGGTTACACGGTGATGACGTA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790658.1 True 1080 mRNA 0.46 1 19168047 19169126

Neighbor

gene id symbol gene type direction distance location
LOC120552541 NA coding downstream 1770 19165388 ~ 19166277 (-)
LOC120547915 clstn2 coding downstream 26354 18892806 ~ 19141693 (-)
pxylp1 pxylp1 coding downstream 370964 18776173 ~ 18797083 (-)
sgpp2 sgpp2,LOC103365078 coding downstream 753906 18398801 ~ 18414141 (-)
acsl3a acsl3 coding downstream 797590 18340612 ~ 18370457 (-)
LOC120552531 NA coding upstream 21368 19190494 ~ 19191790 (-)
mrps22 mrps22,LOC103373397 coding upstream 83210 19252336 ~ 19257822 (-)
her13 LOC103373083,LOC104919393 coding upstream 262233 19431359 ~ 19434295 (-)
her8.2 LOC100691593,LOC105923939 coding upstream 269114 19438240 ~ 19440140 (-)
LOC120548698 NA coding upstream 297537 19466663 ~ 19467908 (-)
G17986 NA non-coding downstream 12796 19154962 ~ 19155251 (-)
G17964 NA non-coding downstream 418646 18749198 ~ 18749401 (-)
G17936 NA non-coding downstream 574374 18592975 ~ 18593673 (-)
G17917 farsb,LOC102796683,LOC102210931 non-coding downstream 784508 18383159 ~ 18383539 (-)
G17782 NA non-coding downstream 1319028 17844434 ~ 17849019 (-)
G18002 NA non-coding upstream 61793 19230919 ~ 19234457 (-)
G18127 NA non-coding upstream 214277 19383403 ~ 19405361 (-)
G18155 NA non-coding upstream 287087 19456213 ~ 19542671 (-)
LOC120573122 NA non-coding upstream 369249 19538375 ~ 19541130 (-)
G18179 NA non-coding upstream 456277 19625403 ~ 19628640 (-)
LOC120545639 eif4g1 other downstream 945154 18179013 ~ 18222893 (-)
zgc:165508 fam131a,LOC102799247 other downstream 1016079 18127466 ~ 18151968 (-)
LOC120552194 NA other downstream 1277386 17799999 ~ 17890661 (-)
xaf1 LOC107094331 other downstream 1689144 17472947 ~ 17478903 (-)
G17597 NA other downstream 2237053 16848161 ~ 16930994 (-)
fbxo46 fbxo46,LOC102786997 other upstream 532101 19701227 ~ 19717307 (-)
si:ch211-11n16.2 LOC104927205,LOC101481481,LOC100694251,LOC103369702,LOC107094496 other upstream 631625 19800751 ~ 19810130 (-)
LOC120547993 NA other upstream 967946 20137072 ~ 20141538 (-)
si:ch1073-340i21.1 NA other upstream 1925051 21094177 ~ 21097201 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other upstream 2068062 21237188 ~ 21261923 (-)

Expression


Co-expression Network