LOC120552531


Basic Information

Item Value
gene id LOC120552531
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 19190494 ~ 19191790 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790667.1
CACAGTTTCACTTGAACTTTGCAGTACCTCAAAGTTGTTTCCTGTTTAAACATTCTCAGTCACTTCCACATGTAGCAACAACCTTTGTTCAATTTGATCTTGAGACATCTGATTTGTGAGCAGACACGGTTCTTGTGGCTTTGTCGCAGTTACATTCACTCGCCTGCACTTCATATTCCTCAGAAGAGAAACATGTTCAACTGTACATTAGAAAATGGGACGGAGCGGGATATGAGGAACACGCCGTACGCTCTGGTGTTTGGATCTGTAATGATGCTGGGTCTGCCTCTCAATGCTGTGTCGCTGTGGATTCTGTTACGCTGCCACAGCCTCAAATCCCCCAGTGTCGTCTTCATGGTCAACCTGGCAATCTCTGACCTGCTGCTCGTCATCTCCTTGCCCATGAGGGTCTACTTTTACGCAACGGGCACTTGGCCTCTGGGCAATAAGGCATGTATCTGGACCACAATGCTCTTTCGCAACAACATCCGCTCCAGCTTCATCTTCATCACCTTCATTAGTGTGGACCGACTGCTGGCTGTCGTCTACCCTCTGAGGTCACGCCATCTCCGAACCACTTCCAACGCCTTGAAAGCTGTTGTACTCGTTTGGCTGTTTTTGTTTGCGTTGAACATCCCAGAAAGTGtgaaattttttatatttttagacACAAATAATGAATCTACCTGTTTTGAATTTCGTTGCAATCCGCCGCATATATTGGCTCATCCTCAGGCTGTGTTTGTGCTCACTATGCTGGCAGTCAACATTGTGTCCACTGCTCTGGTGTCTTGGACTCTACACAGACATCTGAATGACTCCGCAAGGATAAACAACAAGGTGAATGTCATGATGATTTTTGCCATGAACCTGATGATGATCACCGTATTTTTCTTGCCTGTGTCATTGGTTGTCATCTTTGAAAGCTGGAGACATGCTCACACACCACTCATATGTCTTGCTAGTGTGAACTGCTGTCTGGatcctctgttgtattacttTTCTTTTGATGGTTTCtggaagaggaaagaagatgTGGACACCTCTGTTGCAAGAGAATAGTTTGTGATAACAATAGACAGGGACAGGTGGGTTTAAATACTGTTTAAACAGCattatttgtgtgtggatcTGCAATATAAAGGTTACACGGTGACAATGTATGTATATAGAATGTATTTTTCTAGCCCTCCTTCCCCTTTCCCTAAGTGGCTTTGCCACTTGTCAGGCCGCAATTGtaaataagaacctgttcttaatgacttgccTGAAAAAATAAAGGTACAAAAAAATCTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790667.1 True 1297 mRNA 0.44 1 19190494 19191790

Neighbor

gene id symbol gene type direction distance location
LOC120552522 NA coding downstream 21368 19168047 ~ 19169126 (-)
LOC120552541 NA coding downstream 24217 19165388 ~ 19166277 (-)
LOC120547915 clstn2 coding downstream 48801 18892806 ~ 19141693 (-)
pxylp1 pxylp1 coding downstream 393411 18776173 ~ 18797083 (-)
sgpp2 sgpp2,LOC103365078 coding downstream 776353 18398801 ~ 18414141 (-)
mrps22 mrps22,LOC103373397 coding upstream 60546 19252336 ~ 19257822 (-)
her13 LOC103373083,LOC104919393 coding upstream 239569 19431359 ~ 19434295 (-)
her8.2 LOC100691593,LOC105923939 coding upstream 246450 19438240 ~ 19440140 (-)
LOC120548698 NA coding upstream 274873 19466663 ~ 19467908 (-)
rinl NA coding upstream 323473 19515263 ~ 19525581 (-)
G17986 NA non-coding downstream 35243 19154962 ~ 19155251 (-)
G17964 NA non-coding downstream 441093 18749198 ~ 18749401 (-)
G17936 NA non-coding downstream 596821 18592975 ~ 18593673 (-)
G17917 farsb,LOC102796683,LOC102210931 non-coding downstream 806955 18383159 ~ 18383539 (-)
G17782 NA non-coding downstream 1341475 17844434 ~ 17849019 (-)
G18002 NA non-coding upstream 39129 19230919 ~ 19234457 (-)
G18127 NA non-coding upstream 191613 19383403 ~ 19405361 (-)
G18155 NA non-coding upstream 264423 19456213 ~ 19542671 (-)
LOC120573122 NA non-coding upstream 346585 19538375 ~ 19541130 (-)
G18179 NA non-coding upstream 433613 19625403 ~ 19628640 (-)
LOC120545639 eif4g1 other downstream 967601 18179013 ~ 18222893 (-)
zgc:165508 fam131a,LOC102799247 other downstream 1038526 18127466 ~ 18151968 (-)
LOC120552194 NA other downstream 1299833 17799999 ~ 17890661 (-)
xaf1 LOC107094331 other downstream 1711591 17472947 ~ 17478903 (-)
G17597 NA other downstream 2259500 16848161 ~ 16930994 (-)
fbxo46 fbxo46,LOC102786997 other upstream 509437 19701227 ~ 19717307 (-)
si:ch211-11n16.2 LOC104927205,LOC101481481,LOC100694251,LOC103369702,LOC107094496 other upstream 608961 19800751 ~ 19810130 (-)
LOC120547993 NA other upstream 945282 20137072 ~ 20141538 (-)
si:ch1073-340i21.1 NA other upstream 1902387 21094177 ~ 21097201 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other upstream 2045398 21237188 ~ 21261923 (-)

Expression


Co-expression Network