LOC120552698


Basic Information

Item Value
gene id LOC120552698
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6525208 ~ 6526163 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790925.1
AGGTTGTGTTGTGAACTAAACGGATGATCATGATGAACTCTACACAGGTTTCATATTTCACTTTTGGTGCATACTTTGATATTGGGCTCTTTAAATACTTATTTTTCACAATCATTATGTGTTTTTATGCTGTAATAGTTTGTGCCAATCTTTTGCTGATTGTGGTTATCTGTATGAACAGAAGCTTACATGAACCTATGTACCTTTTTCTGTGCAGCCTGTTTGTAAATGAACTGTATGGTAGTACAACAATGTTACCATTCCTTCTGGTTCAGATCCTCTCTGACATTCACATTATTTCTGCTCCcttctgtttcctgcagatttattgtgtgtttgcatatggaACTATAGAAATTATTAATTTATCCGTAATGTCTTATGACAGATATCTTGCTATCTGTTATCCTCTGCAATATAATACAAGTATGACATCTAACAAGGTTGCCGTGCTTATTGCTCTAACATGGTTATTCCCATTTATTGAAGTTGCTGTCAAAATATCTTTGAGTTCCTctttacagctgtgtgggaACATCATTAACAAAGTTTACTGTGATAATTACTCTGTTGTCAAACTGGCCTGCTCTGTCGCCACAGTGAACAACATTTATGGACTCATTTACACTTGTCTTATAGTCTTTGTTCCTCTCAGTTTAATCCTTTACACGTACATCAAGAtctttaaagtttgtttttctgGTTCTAAACAGACCAGACAGAAAGCTGTCAGTACCTGCACACCTCACCTTGCTTCTGTACTCAACTTTTTCTTTGGTTGTTtctttgaaatattacagagcaGGTTTAATATGAGCAGTGTACCCATGATGTTGCGCATTGTTTTGTCATTATACTTTCTTACCTGCCAACCAATCTTTAACCCTTTAATGTATGGTCTGCAAATGTCAAAAATACGTGGCTTATGTAAAAGTCTTGTCTTCggtaaaatgtaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790925.1 True 956 mRNA 0.36 1 6525208 6526163

Neighbor

gene id symbol gene type direction distance location
LOC120545383 NA coding upstream 4424 6510745 ~ 6520784 (+)
LOC120572075 NA coding upstream 8692 6512177 ~ 6516516 (+)
abcg1 abcg1,LOC103475277,LOC103152983,LOC102205798 coding upstream 76880 6420513 ~ 6448328 (+)
LOC120549609 NA coding upstream 172207 6350475 ~ 6353001 (+)
LOC120545249 NA coding upstream 200798 6323484 ~ 6324410 (+)
LOC120572775 NA coding downstream 8306 6534469 ~ 6535401 (+)
LOC120552719 NA coding downstream 15200 6541363 ~ 6542380 (+)
LOC120545393 NA coding downstream 24527 6550690 ~ 6551630 (+)
LOC120572346 NA coding downstream 63573 6589736 ~ 6590668 (+)
LOC120545404 NA coding downstream 73596 6599759 ~ 6607610 (+)
G14930 NA non-coding upstream 13322 6511135 ~ 6511886 (+)
G14928 NA non-coding upstream 15234 6508571 ~ 6509974 (+)
G14917 NA non-coding upstream 30558 6494388 ~ 6494650 (+)
G14908 NA non-coding upstream 48062 6476674 ~ 6477146 (+)
G14907 NA non-coding upstream 51439 6473510 ~ 6473769 (+)
G14939 NA non-coding downstream 52059 6578222 ~ 6578453 (+)
LOC120572178 NA non-coding downstream 163868 6690031 ~ 6690891 (+)
G15012 NA non-coding downstream 418159 6944322 ~ 6991913 (+)
G15021 NA non-coding downstream 451636 6977799 ~ 6978105 (+)
G15032 NA non-coding downstream 490632 7016795 ~ 7017311 (+)
spcs2 spcs2 other upstream 107699 6407985 ~ 6417509 (+)
rnf169 NA other upstream 120783 6393062 ~ 6404425 (+)
G14344 NA other upstream 996589 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1108073 4801340 ~ 5417135 (+)
G14209 LOC102792843 other upstream 1997831 4500173 ~ 4527377 (+)
G15019 NA other downstream 446682 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 871938 7398101 ~ 7399141 (+)
G15234 NA other downstream 965202 7491365 ~ 7492057 (+)
rffl rffl other downstream 1280646 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 1300447 7826610 ~ 7828087 (+)

Expression


Co-expression Network