LOC120552719


Basic Information

Item Value
gene id LOC120552719
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6541363 ~ 6542380 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790945.1
AGAAAATGTTATCTTGTAAAATGAtataatttttgtttttcagagtcAGGAGGATCATGGTAAACGCTACGCAGGTTTCACTTTTCACACTAAGTGCCTATTTTGATACTGGGgttttcaaatatttatattttattattatcatatctTCATATATTGTAATACTTTGTACCAATCTTTTGCTGATTGTGGTTATCTGTAAGAACAGAAGCTTACATGAACCTATGTACCTTTTTCTGTGCAGCCTGTTTGTAAATGAACTGTATGGTAGTACAGGGTTGTTTCCATTCCTTCTGGTTCAGATCctctctgacattcacactgtttctgctccattctgtttcctgcagattttCTGTGTGTATACTTATGGCAGTGTAGAGTTTTGCAACTTAGCTGTCATGTCTTATGACAGATATCTTGCTATCTGTTATCCTCTGCAATATAACACACGTATGACATCTAACAAGGTTGCCATGCTTATTGCTCTAACATGGTTATTTCCTTTTCTTGCAATTGCTGTTTTGATATCTTTGAGTGCACCTCTAAAGCTGTGTGGAAACATCATTGACAAAGTTTACTGTGGAAACTACTCCATTGTTAAGCTGGCCTGTGCTGACACCAGAGTGAACAACATTTATGGACTCTGTTACACTGTCATCTCCATCATCATTCCTCTACTTTTAATCCTTTACACTTACATGAAAAtctttaaagtgtgtttttctgGTTCCAAACAGACCAGACAGAAAGCTGTCAGTACCTGCACACCTCACCTCGCTTCCCTGCTTAACTTTTCTTTTGGTGGTTCTTTCCAAATAATACAGAGCCGGTTTGATATGAGCAGTGTACCCAACATGTTGAGCATCTTATTATCGTTATACTTTCTAACATGCCAGCCGCTCTTTACCCCAGTGCTGTACGGGCTGAAAATTTCTAAAATCCGCATGATCTGTAAACGCCTGGTGTGTGGTAAAGTGTGAGATTAGTTCAGTTTTACATACAtgaaacagcaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790945.1 True 1018 mRNA 0.38 1 6541363 6542380

Neighbor

gene id symbol gene type direction distance location
LOC120572775 NA coding upstream 5962 6534469 ~ 6535401 (+)
LOC120552698 NA coding upstream 15200 6525208 ~ 6526163 (+)
LOC120545383 NA coding upstream 20579 6510745 ~ 6520784 (+)
LOC120572075 NA coding upstream 24847 6512177 ~ 6516516 (+)
abcg1 abcg1,LOC103475277,LOC103152983,LOC102205798 coding upstream 93035 6420513 ~ 6448328 (+)
LOC120545393 NA coding downstream 8310 6550690 ~ 6551630 (+)
LOC120572346 NA coding downstream 47356 6589736 ~ 6590668 (+)
LOC120545404 NA coding downstream 57379 6599759 ~ 6607610 (+)
LOC120545410 NA coding downstream 69932 6612312 ~ 6613238 (+)
LOC120545416 NA coding downstream 74417 6616797 ~ 6617723 (+)
G14930 NA non-coding upstream 29477 6511135 ~ 6511886 (+)
G14928 NA non-coding upstream 31389 6508571 ~ 6509974 (+)
G14917 NA non-coding upstream 46713 6494388 ~ 6494650 (+)
G14908 NA non-coding upstream 64217 6476674 ~ 6477146 (+)
G14907 NA non-coding upstream 67594 6473510 ~ 6473769 (+)
G14939 NA non-coding downstream 35842 6578222 ~ 6578453 (+)
LOC120572178 NA non-coding downstream 147651 6690031 ~ 6690891 (+)
G15012 NA non-coding downstream 401942 6944322 ~ 6991913 (+)
G15021 NA non-coding downstream 435419 6977799 ~ 6978105 (+)
G15032 NA non-coding downstream 474415 7016795 ~ 7017311 (+)
spcs2 spcs2 other upstream 123854 6407985 ~ 6417509 (+)
rnf169 NA other upstream 136938 6393062 ~ 6404425 (+)
G14344 NA other upstream 1012744 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1124228 4801340 ~ 5417135 (+)
G14209 LOC102792843 other upstream 2013986 4500173 ~ 4527377 (+)
G15019 NA other downstream 430465 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 855721 7398101 ~ 7399141 (+)
G15234 NA other downstream 948985 7491365 ~ 7492057 (+)
rffl rffl other downstream 1264429 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 1284230 7826610 ~ 7828087 (+)

Expression


Co-expression Network