slc25a15a (slc25a15,LOC103152068,LOC106945435,LOC103475195)


Basic Information

Item Value
gene id slc25a15a
gene name slc25a15,LOC103152068,LOC106945435,LOC103475195
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 40835668 ~ 40844838 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790994.1
TTTATTAAAGGCAGGAAGTACCCTATGCCGATTCTACAGTCTAATTATAGCCAACGCCTAATtaacattcttttcatttcgtGGTTAAAATAAATAGTATCCTGTATTTTTGTGGCTTCCTCCGGATAGCTTGATGCAACTCATTGTGCGCAAAGTGCACACTTTTACGCACGGAAGGAGCGACCTTGCAATCCGCCTATGGATTTCTCAAGACGCAGAGAAAGCGGAAGAACTTTACACTCCCGCAGCACACTCCGGCCATGGGTGAATTCAAAGGACATTTGAACATTGCCATGCGTTCCTGGAAATCTGTGTCTCACTTTGCTCATTAAGATGCTCATATGGCAAAAAGTATTCCGTGGTAGAGTTTAGGTGAGTCTTGCTACTGGAAAAATGTGTAGATTGGAGCTCAATTTGTGCCAACATGGAGCATCGCGCGGACACCCTGTAgtgcaataaataaatgtgaggGAAGCAAAGATTAACAGAGCGAGGAGACCATAGCTCAAACTTTCAGATTGACAGCATTTAATAAATCATAATGGCTCCACATCCCGTAATCCAGGCAATCATCGACTTTTCGGCTGGAGCAATAGGTGGAACAGCTTGTGTGCTGAGTGGTCAGCCGTTTGACACCACAAAGGTGAAGATGCAGACGTTCCCCACCATGTACCGCGGCTTCATCCACTGCTTTACATCCACCTTCAGGCAGGTGGGACTACGTGGTCTCTACAAAGGCTCGAGCCCGGCCCTAATAGCCAACATCAGTGAGAACGCTGTGCTCTTCTTGAGTTATGGTCTCTGCCAGGATGCCATCCGCTTTGTGTCCAGGATGGATAAAGGAGCAGGTCTCagTGATATTCAGAAGGCATCCGCAGGGTCTTTAGCATCCATCTTCTCCTCCATGGCGATATGCCCCACCGAGCTGGTGAAATGTCGCCTGCAGGCCATGCACGAAATGGAAGCATCTGGCAGGATCGCAAGCGGACAGAGAAGCACAGTGTGGGCCGTAGTGAAGACAGTGTTGAAGACAGACGGCCCCCTGGGTTTCTACCAAGGCCTGACATCCACCATGGTGAGGGAGATACCAGGTTACTTCTGCTTCTTTGGAGCCTATGAAATGTGTCGGTCTAAATTTGCGCAGCACATGGGCACGGACAAGGACAGCATAGGTGTTCTTCCACTCATGTTCAGCGGTGGATTTGGGGGTGCTTGTCTGTGGTTGATAGTCTATCCCATAGACTGTGTGAAGTCCAGGATCCAGGTGTACTCTCTAGCTGGGAGGCAAGAGGGCTTCATGAAGACCTTCAAGGGCATCATACGCTCTGAAGGGTTCACTGCTCTGTACTCGGGCCTGACTCCTACCATGATACGCACCTTCCCTGCCAATGGAGCCCTCTTCCTGGCTTATGAGGTCAGCCGCAAGTTCATGATGAAGACAGCTGGTGAATGATGTGGAGGATCTTTACAACTGAAGAAAGTATGGTGCCGAAACACTGCCTTGTCCCCTTGTATTTTTAAAATGAGATGACCAAACGTTTTTATTGTGTCCTGTTTGATTATGAGCtaaatgatttttatttttatttttctgttgctttGACTCTACTGCCCCCTGTGAGGAATGTGtaaatttaattaaaaccaTTACACCCTCTGA

Function

symbol description
slc25a15 Enables L-ornithine transmembrane transporter activity. Predicted to be involved in mitochondrial L-ornithine transmembrane transport. Predicted to be located in mitochondrial inner membrane. Implicated in amino acid metabolic disorder; citrullinemia; and ornithine translocase deficiency.

NR:

description
mitochondrial ornithine transporter 1-like

GO: NA

KEGG:

id description
K15101 SLC25A2_15, ORNT; solute carrier family 25 (mitochondrial ornithine transporter) member 2/15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790994.1 True 1660 mRNA 0.47 7 40835668 40844838

Neighbor

gene id symbol gene type direction distance location
stoml3a stoml3,LOC104925222,LOC101073007,LOC105935001 coding downstream 3074 40824753 ~ 40832594 (-)
usp16 NA coding downstream 567394 40260360 ~ 40268274 (-)
LOC120544420 bach1 coding downstream 575415 40227369 ~ 40260253 (-)
LOC120546558 LOC103363424,LOC104943694 coding downstream 922908 39904112 ~ 39912760 (-)
LOC120546419 LOC104923287,LOC104947775,LOC103363426,LOC101479268 coding downstream 934221 39868408 ~ 39901447 (-)
cog6 cog6,LOC102796367 coding upstream 79187 40924025 ~ 40955064 (-)
trnak-uuu_7 NA coding upstream 186968 41031806 ~ 41031878 (-)
lpar6a lpar6,LOC104952799,LOC101069375,LOC103363548 coding upstream 271840 41116678 ~ 41119295 (-)
rcbtb2 rcbtb2,LOC100697269 coding upstream 287849 41132687 ~ 41149107 (-)
ndufc2 ndufc2,LOC101465984,LOC102192131,LOC100708544 coding upstream 431169 41276007 ~ 41278704 (-)
G23015 NA non-coding downstream 59744 40771887 ~ 40775924 (-)
G23014 NA non-coding downstream 65687 40769741 ~ 40769981 (-)
G23013 NA non-coding downstream 66543 40768918 ~ 40769125 (-)
G23012 zgc:63694,LOC108410642,LOC107752277,LOC107699226,LOC107555275 non-coding downstream 69600 40765851 ~ 40766068 (-)
G23011 NA non-coding downstream 71663 40762024 ~ 40764005 (-)
G23069 NA non-coding upstream 171808 41016646 ~ 41017064 (-)
G23127 NA non-coding upstream 325846 41170684 ~ 41222462 (-)
G23130 fndc3a non-coding upstream 351855 41196693 ~ 41198970 (-)
G23141 NA non-coding upstream 410536 41255374 ~ 41257366 (-)
G23151 NA non-coding upstream 446867 41291705 ~ 41291910 (-)
cadm2b cadm2,LOC100695412,LOC103378151,LOC106520568,LOC102793287 other downstream 365492 40290005 ~ 40470176 (-)
LOC120546248 LOC103363423,LOC101478053,LOC102201911,LOC102303851 other downstream 802512 39943571 ~ 40033156 (-)
LOC120570635 sel1l3,LOC103353588 other downstream 2099845 38727508 ~ 38735823 (-)
robo2 NA other downstream 2187069 38353024 ~ 38648599 (-)
p4ha3 p4ha3 other downstream 3089386 37732841 ~ 37746282 (-)
cntn5 NA other upstream 1184835 42029673 ~ 42167037 (-)
LOC120574039 nlk,nlk2 other upstream 2391844 43236682 ~ 43346673 (-)
LOC120553425 NA other upstream 2856133 43700971 ~ 43716741 (-)
smco4 NA other upstream 2925228 43770066 ~ 43789435 (-)
mrps23 mrps23 other upstream 3971790 44816628 ~ 44824993 (-)

Expression


Co-expression Network