LOC120553235


Basic Information

Item Value
gene id LOC120553235
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 35066998 ~ 35110606 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791444.1
aaacaacaaaaacaaaagcctcAACCAAGTGGTTGTAACAAACCTTTGAAACAAGCAGCCGACTAAAGGATCTGAGAGACCCGCAAGGATGCACTTGTTGTCCGCCAGCAGCGTGCGTGCCCTCCTCATCGCCGCGCTCCTCCGCCAAGTCAGCGGTTTGGAGACTTTTATCGGTCAGTATGGGGAAACACTCGAGATCCCGTGCAAAAATGGAGCCATGAAAGCAGAGGACATCCTGATCACTAAATGGAAATATGACAAAGGAGAGGGACTTTCTGGGGACCTTCTGGTCAAGCGGAAAGACCAGAATTTCTTAATCACCGCCACTGATGAGTACAAGGGCCGTGTGAGCATGGCTGCAAACTCCAGTCTGCTTCTTACTGAAGCCAGGCTGACTGACCagcgcactttcacctgcatgGTGGTGGCTGGCGCAGACATCGCAGAATACCCGGTTAACGTTGTGATCTACAAGGCGCCGGCAGGCCTGGAGATTTCTGAAAACGTGCAGGAACTAGAGATTGGCAAACTTACTAAGCTCGGAAAATGTGTTGCGAAAGACGCCAATCCAGCTGCAAATATCACATGGCTGAAGAACAACACACCACTGGTGGCGGATGGGAAAGGGATTTCCATCAAAGCCTCAGTGGTGGTGGACCCTGACACTGGCCTTTCATCCACTAGCTCAATACTGGAGTACTCGGCCAAGAAGGAAGACACGGACGCTGAGTTCACCTGCAGCACTCAGCACACTGTGGGCGCCGAGCTGGTGTCCTCTCCAGTCACCCTGACTATCACCTACTCTACAGAGAACATCGTCCTTAAGGTCATTGCTCAGGACCCTCTGATAGAAGGAGACAATGTGACTCTGAAGTGTGTGGCCGATGGTAACCCAGCTCCTACCGCCTTTAACTTCCACCTTAAGGAAGAGTTGGTGAAAGTGGAAAACGCAGATACTTACACCATCACGAATGTCTCACGTGACACCACTGGTGAATACAAATGCTCTCTTGTTGATAACCCAACAATTGAAGATTCTGAGGACATCACAGTCAACTACCTAGACATCAATTTAAGCCCCTCTGGAAATATCGTTAAGAGTGCCGGTGAGGCCATGGATCTAACTCTCCAGATTTATTCCTCCGGAGAGTACAAGGTGTCCTGGACAAAgGACAATGTTAAACTGGACAAAGAGCCCAAGTTTACCAAGCTGACTTACGCTCAGTCTGGCGTCTATGAATGTGAGGTGACAAATGGGGCCCTCAGCCTAAAAGCTTCCCTTGAGCTGGCTGTCCAAGGTGCTCCAGTTATCAAGCAGCTGTCCAAACGGCGCAGTGAAGACGGCAAACATAAAATCCTGATTTGTGAGGTTGAAGGTTCTCCAAAGCCAGCTGTTTCCTGGAGCATCAACGGCACCTcgCATGATGAGAGTCCCTTCCTCAACGGGAAGATAATACACAAGATCACAGTTATGCCTGCTGCAAATCTGACTGTCTCTTGTACGGCGTCCAATGAGTTTGGCGCGGATAGCAAAACTATGAATGTGTCATCTCTAATTGAGGAGGTGAGAATGGATAAACAAGACCAATCGGATGAAAATGACCAAACCAAGTTGGTGGTTGGAGTTGTAGTCGGTCTCCTTGTCGCCACTATTGTTATAGGCCTGGCATACTGGGTCTACATGAAGAAGTCCAAGCAAGGAAGCTGGAAGACTGGTGAAAAGGAGAACGGGTCTtctgaggaggagaaaaaactGGAGGAGAAAGTGGAGGAGAACAGCCAAAAAGCTGAGGTGTAAAGAAACGGCAACCATCCTTTGGGAATGTGAAAGTGAGAACGTGGAACTTTTGCACATTTCCCTTACTTCTGtctttgggggaaaaaaaatatgagtGTACATTGGGATGAATACGGTTTGGATTTGGTTTCAGGGAGAATTTGACTAAAAAGCATATCCAAACATGCCCCTTACCCCTCCAACCCTTACCCCTccattcctaaaaaaaaaaaaagagaaaagaatggATACTGTATGTGATATACATAACTTGTCTGCACTACTGATACACGTGTAAACTTCTTTATCTACTATTAGGATTCATGTTTGGAATTTGGGAAACTGAGAAAATGCAGATCTTTTTGGTTTTGTTAGTTGATGCCTGTATAATTACTACTAGACCAGTTGCCTTTGCTGTAAGGATGTGTAGGCCTGCATTAGTCTGACTCTTGGGCCCTTGGAGACATAGCAGGGACCGAGGGACATCACCGCCATCGCTTCTTAGCTTCACGTCATCACAGTCAAACAACCTCTGCCTACAACATCAGTGTACAAAAtctgtttatttgtgcattcaTTATAGTTTGTTATAGAATTTGTTGTTGAAATAGATGAAATTCCTGAAAGGGCTATGGGTATATTGTTATACTCGGCATAAGTTATAGATGGTAATATGATTTACATGTTGCATTGCAGGAGTAAGTAACCaggagagaaaacaacagaaacccAGTTCATTTTGccagtttcttttttcaaatgcacTGTACATTCGACGTAACCACTGCATAACACAAGCAGGTAGATTATTGAGAGGATGTATAGCATAACTCAATTCATATCACTGGCTTTAATTTGGCTGTACAGATTGTTTTACATAAAgccattgtttgttttcatgcaaGAAGAAGTCCTTGAGCCTGTAGTAGTGAAATAACTTTTAAGTTTCAAGGCTGTAAGTGAATTCTTAATTTGTGCTGCATCAGTGTTAAGGTATGATTGTTTATTGTGTAGCTATATGGCATAACTTCTAATGGAGCACACGGAGAGGATAATGTGTTTGTCTCAAAGTAGCCGTCATGAtatgtttgccttttttttgaAAATCTACCTGTAATGGCTTCAGTTTGTGACGTGCACTAGGGTTCATGTTTTCATGTCAGATTTGTGTAGAATACGATGGAATACGCGCAGCTGTACATGTCACAAATTTGGTCCTTTTAAGAGCATAtactaaattaatttttttttttcaaaaccagGATGTGATTGTGAAGTATGTGAATTTAGTTTTCTCTTTGCTATTTATATTGTACAATATTAAATGTCCTGGTAGGCAAATTTAATAATAGTCACATAATTCATAACTTGGATTGAAACCGTAACAAAACGTAAATTGCTTGCAGActttacaaaaaatgtaatgaagTTGTGATTCATCAGTAGGTTGTTCAGCGTCTGGTTGAATAATAGATTCAGCATGCGATCATCTCAGACCTCCAAGCTGCTGTTTGTTGCCTACCTTGTGTAAAACCATCAAATTGGAAGAATGACCAAAGAAAGTGAACATGCCATGCAAGTATTGTAAATacctgatgtttgtttttttgtacttttgtttaaaataaagtgTACATTTGGAAAAGTTA
>XM_039791454.1
aaacaacaaaaacaaaagcctcAACCAAGTGGTTGTAACAAACCTTTGAAACAAGCAGCCGACTAAAGGATCTGAGAGACCCGCAAGGATGCACTTGTTGTCCGCCAGCAGCGTGCGTGCCCTCCTCATCGCCGCGCTCCTCCGCCAAGTCAGCGGTTTGGAGACTTTTATCGGTCAGTATGGGGAAACACTCGAGATCCCGTGCAAAAATGGAGCCATGAAAGCAGAGGACATCCTGATCACTAAATGGAAATATGACAAAGGAGAGGGACTTTCTGGGGACCTTCTGGTCAAGCGGAAAGACCAGAATTTCTTAATCACCGCCACTGATGAGTACAAGGGCCGTGTGAGCATGGCTGCAAACTCCAGTCTGCTTCTTACTGAAGCCAGGCTGACTGACCagcgcactttcacctgcatgGTGGTGGCTGGCGCAGACATCGCAGAATACCCGGTTAACGTTGTGATCTACAAGGCGCCGGCAGGCCTGGAGATTTCTGAAAACGTGCAGGAACTAGAGATTGGCAAACTTACTAAGCTCGGAAAATGTGTTGCGAAAGACGCCAATCCAGCTGCAAATATCACATGGCTGAAGAACAACACACCACTGGTGGCGGATGGGAAAGGGATTTCCATCAAAGCCTCAGTGGTGGTGGACCCTGACACTGGCCTTTCATCCACTAGCTCAATACTGGAGTACTCGGCCAAGAAGGAAGACACGGACGCTGAGTTCACCTGCAGCACTCAGCACACTGTGGGCGCCGAGCTGGTGTCCTCTCCAGTCACCCTGACTATCACCTACTCTACAGAGAACATCGTCCTTAAGGTCATTGCTCAGGACCCTCTGATAGAAGGAGACAATGTGACTCTGAAGTGTGTGGCCGATGGTAACCCAGCTCCTACCGCCTTTAACTTCCACCTTAAGGAAGAGTTGGTGAAAGTGGAAAACGCAGATACTTACACCATCACGAATGTCTCACGTGACACCACTGGTGAATACAAATGCTCTCTTGTTGATAACCCAACAATTGAAGATTCTGAGGACATCACAGTCAACTACCTAGACATCAATTTAAGCCCCTCTGGAAATATCGTTAAGAGTGCCGGTGAGGCCATGGATCTAACTCTCCAGATTTATTCCTCCGGAGAGTACAAGGTGTCCTGGACAAAgGACAATGTTAAACTGGACAAAGAGCCCAAGTTTACCAAGCTGACTTACGCTCAGTCTGGCGTCTATGAATGTGAGGTGACAAATGGGGCCCTCAGCCTAAAAGCTTCCCTTGAGCTGGCTGTCCAAGGTGCTCCAGTTATCAAGCAGCTGTCCAAACGGCGCAGTGAAGACGGCAAACATAAAATCCTGATTTGTGAGGTTGAAGGTTCTCCAAAGCCAGCTGTTTCCTGGAGCATCAACGGCACCTcgCATGATGAGAGTCCCTTCCTCAACGGGAAGATAATACACAAGATCACAGTTATGCCTGCTGCAAATCTGACTGTCTCTTGTACGGCGTCCAATGAGTTTGGCGCGGATAGCAAAACTATGAATGTGTCATCTCACCAATCGGATGAAAATGACCAAACCAAGTTGGTGGTTGGAGTTGTAGTCGGTCTCCTTGTCGCCACTATTGTTATAGGCCTGGCATACTGGGTCTACATGAAGAAGTCCAAGCAAGGAAGCTGGAAGACTGGTGAAAAGGAGAACGGGTCTtctgaggaggagaaaaaactGGAGGAGAAAGTGGAGGAGAACAGCCAAAAAGCTGAGGTGTAAAGAAACGGCAACCATCCTTTGGGAATGTGAAAGTGAGAACGTGGAACTTTTGCACATTTCCCTTACTTCTGtctttgggggaaaaaaaatatgagtGTACATTGGGATGAATACGGTTTGGATTTGGTTTCAGGGAGAATTTGACTAAAAAGCATATCCAAACATGCCCCTTACCCCTCCAACCCTTACCCCTccattcctaaaaaaaaaaaaagagaaaagaatggATACTGTATGTGATATACATAACTTGTCTGCACTACTGATACACGTGTAAACTTCTTTATCTACTATTAGGATTCATGTTTGGAATTTGGGAAACTGAGAAAATGCAGATCTTTTTGGTTTTGTTAGTTGATGCCTGTATAATTACTACTAGACCAGTTGCCTTTGCTGTAAGGATGTGTAGGCCTGCATTAGTCTGACTCTTGGGCCCTTGGAGACATAGCAGGGACCGAGGGACATCACCGCCATCGCTTCTTAGCTTCACGTCATCACAGTCAAACAACCTCTGCCTACAACATCAGTGTACAAAAtctgtttatttgtgcattcaTTATAGTTTGTTATAGAATTTGTTGTTGAAATAGATGAAATTCCTGAAAGGGCTATGGGTATATTGTTATACTCGGCATAAGTTATAGATGGTAATATGATTTACATGTTGCATTGCAGGAGTAAGTAACCaggagagaaaacaacagaaacccAGTTCATTTTGccagtttcttttttcaaatgcacTGTACATTCGACGTAACCACTGCATAACACAAGCAGGTAGATTATTGAGAGGATGTATAGCATAACTCAATTCATATCACTGGCTTTAATTTGGCTGTACAGATTGTTTTACATAAAgccattgtttgttttcatgcaaGAAGAAGTCCTTGAGCCTGTAGTAGTGAAATAACTTTTAAGTTTCAAGGCTGTAAGTGAATTCTTAATTTGTGCTGCATCAGTGTTAAGGTATGATTGTTTATTGTGTAGCTATATGGCATAACTTCTAATGGAGCACACGGAGAGGATAATGTGTTTGTCTCAAAGTAGCCGTCATGAtatgtttgccttttttttgaAAATCTACCTGTAATGGCTTCAGTTTGTGACGTGCACTAGGGTTCATGTTTTCATGTCAGATTTGTGTAGAATACGATGGAATACGCGCAGCTGTACATGTCACAAATTTGGTCCTTTTAAGAGCATAtactaaattaatttttttttttcaaaaccagGATGTGATTGTGAAGTATGTGAATTTAGTTTTCTCTTTGCTATTTATATTGTACAATATTAAATGTCCTGGTAGGCAAATTTAATAATAGTCACATAATTCATAACTTGGATTGAAACCGTAACAAAACGTAAATTGCTTGCAGActttacaaaaaatgtaatgaagTTGTGATTCATCAGTAGGTTGTTCAGCGTCTGGTTGAATAATAGATTCAGCATGCGATCATCTCAGACCTCCAAGCTGCTGTTTGTTGCCTACCTTGTGTAAAACCATCAAATTGGAAGAATGACCAAAGAAAGTGAACATGCCATGCAAGTATTGTAAATacctgatgtttgtttttttgtacttttgtttaaaataaagtgTACATTTGGAAAAGTTA

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0043227 membrane-bounded organelle cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791444.1 True 3426 mRNA 0.43 16 35066998 35110606
XM_039791454.1 False 3396 mRNA 0.43 15 35066998 35110606

Neighbor

gene id symbol gene type direction distance location
trnap-cgg NA coding downstream 20049 35046878 ~ 35046949 (-)
LOC120548171 LOC100701857,LOC103364405,LOC102289028,LOC102776134 coding downstream 20910 35041121 ~ 35046088 (-)
map6b LOC103364403,LOC102775646,LOC100702126,LOC101476458 coding downstream 26209 35034692 ~ 35040789 (-)
zgc:112083 NA coding downstream 39566 35018246 ~ 35027432 (-)
c18h3orf33 NA coding downstream 90636 34973004 ~ 34976362 (-)
LOC120548790 LOC103364414 coding upstream 44582 35155188 ~ 35161813 (-)
LOC120544225 NA coding upstream 114609 35225215 ~ 35228072 (-)
lim2.3 LOC100696479,LOC102233234,LOC101068011,LOC107083386,LOC104944607,LOC105023215 coding upstream 144771 35255377 ~ 35257619 (-)
acad8 acad8 coding upstream 303324 35413930 ~ 35419822 (-)
vps26b vps26b coding upstream 313796 35424402 ~ 35430940 (-)
G21779 NA non-coding downstream 50718 35016047 ~ 35016280 (-)
G21716 NA non-coding downstream 157277 34909365 ~ 34909721 (-)
G21685 NA non-coding downstream 280762 34785923 ~ 34786236 (-)
G21665 NA non-coding downstream 635700 34431071 ~ 34431298 (-)
G21640 NA non-coding downstream 896503 34169362 ~ 34170495 (-)
G21805 LOC107597532,LOC100125490,LOC103474213,LOC103139657 non-coding upstream 125469 35236075 ~ 35240308 (-)
G21854 NA non-coding upstream 310675 35421281 ~ 35421721 (-)
G21885 NA non-coding upstream 471875 35582481 ~ 35582706 (-)
G21941 NA non-coding upstream 725383 35835989 ~ 35837435 (-)
G21953 NA non-coding upstream 755169 35865775 ~ 35872049 (-)
LOC120570300 NA other downstream 502453 34555835 ~ 34564545 (-)
G21674 NA other downstream 584965 34481458 ~ 34482033 (-)
LOC120548089 gpr149,LOC102798740 other downstream 962178 34093140 ~ 34104820 (-)
mfsd1 mfsd1 other downstream 1437730 33613429 ~ 33629268 (-)
LOC120549978 NA other downstream 1923735 33129495 ~ 33143263 (-)
zgc:77784 LOC103362442 other upstream 154689 35265295 ~ 35336232 (-)
lrfn1 lrfn1 other upstream 866136 35976742 ~ 36264039 (-)
taok1a LOC103356490,LOC104958432 other upstream 1199311 36309917 ~ 36330409 (-)
dph1 dph1,LOC102789142 other upstream 1350073 36460679 ~ 36550114 (-)
kiaa0753 kiaa0753 other upstream 2001590 37112196 ~ 37135841 (-)

Expression


Co-expression Network