LOC120554161 (mipep)


Basic Information

Item Value
gene id LOC120554161
gene name mipep
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 23377094 ~ 23409078 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792854.1
CACTTTCGACATATTTGACTAGCACGGATTATCGTTACTTAGCAACATTAGAAAAAATGGAACACTATTCCGAATAATATACATAGTGTAATCTTCTATTTAGTATAAagctgactttttttaaattcatatttatatatattatttcccCCCACGAAAATACCACCTGCTACAGTCATTTAGATTTGCTTTCACAGATAACCAGTAAGCTAACATGTGAGCAGAGCAGTTGTGTTTGTTGTCTTGACAGGTAACGTTGCGCGTCTTAAAAGGTAGCTAGCCCTTAATTTCCCTGAAGATAAAGGTTTAGAATATATTCACGTTATTTACATTAGTTATTAACATTTCCGGCTTTTGCAAACAGGCTAACATTGAAGCTAAAGTTTAGCATGTCCTCTGTCAGTCACTGTCACTACAAGCTTCAGTAACGTTAGAACATCAACAGTACAGCAGATTTAGTACAACATGTCTGCGTGTAAAAGGTTGCTTTACTTTGTAAGGCAGCGAAGCTTATGGACTCATGTTCGGAGAAATGTCACAACATGGTCTCCTGTTGCAGCTGCCTTCAATGCCAAACCTCACAGGAGACTGAACTTGATCGAGAAAAACGTGGGTTTGTTTGGAGTACCAGAGCTGAGCTGTCATGCAGGCTTCCAGGCAGCCACAGAAACAGCTCTCAAGAACACAGAGCGTCTGGTGGGAAAAGCTTGTTCTTGTTCTCCAGGGGTTGAGACAGTCGAGTCTTTTGACCAGCTCTCAGATGGTTTGTGTAAAGTGGCTGATCTGGCAGACTTTGTTAAAGTTGCACATCCAGATCCAGCGTTTCGCGAGGCTGCAGAGAAGACCTGTATAGAGATTGGCACAGTTGTGGAGAAGCTAAACACTAATGTCAAGCTATGCAAGAGCCTAAAAATATTGCTGGACAACCCAGACATTGTGGCTCAGCTGGACCCTAATACAAGAAAAGTGGCCGAGTTGTTCATGTTTGACTTTGAAATCAGTGGAATTCATCTGGATGACAAACTGagaaaagaggcagTCGCCCTTCATGTGAAGCTGTTGGATCTTAACAACGAGTTTCTGGTTGGCTCTCACCTACCGAACAGAATTGCGAGGTCTGCAATTCCTGAGCATCTACACATGCACTTTGCGGATGAAGGAAGCTTCATCCAAGTTGGGGGATTACATGCAGATTCCCCCAATGACTTGGTTCGAGAAATTGCCTACAGGATTTACCTTTATCCAAATGCAGATCTGATGGATTGTCTGGAAGAGCTGCTAAAATGCAGATACAAACTGGCCAAACTGGTGGGCTACGACTCCTATGGACACAGAGCCCTAAAGGGAACGATGGCCAAAACACCAGAGACGGTGATGAGCTTTCTTCAGCTGTTAACAGACAAGCTGTCAGACAGAACAGCCAAAGACTTTAAGATGATGAGgaacatgaagaaaaaactcAACCCTCGTAATTCTGAGCTCATGCCATGGGATCATCCGTACCTCAGTGGTGTCTTGCGTGCTGAAAGGTACAACATAGAGCCCAGTCTGTACAGTCCATATTTGTCTCTGGGTGCCTGTATGGAGGGTTTGAACAACCTCTTCTCTCAGCTGTACGGTGTGTCCCTCATGTCCGAACACCCCAGTGCTGGAGAGGTCTGGAGCGAGGATGTCCGCAAACTGGCTGTGGTACATGAGACAGAGGGTTTATTGGGATATATCTACTGCGACTTTTACCACCGGCAGGATAAACCTCAACAGgACTGTCACTTCACCATCCGCGGTGGCCGCTGGTGCCAAGAAACGGGTCAGTACCAGCTTCCAGTTGTGGTGCTAATGCTGAGTCTGCCCCACCCGACCAAGAGCGCCCCCACCCTGCTCACACCGGGCATGATGGAGAACCTCTTCCATGAAATGGGACACGCCATGCACTCCATGCTGGGACGCACTCGCTACCAGCATGTGACAGGAACCAGATGTGCGACTGACTTCGCTGAAGTCCCATCCATCCTCATGGAGTACTTTGCCACTGACTATAGAGTCCTCAGCCAGTTTGCACGCCATTATGAAACTGGACAGCCTCTGCCTGAGAGCATGGTGGCTCGCCTTTGTGAGTCAAAGAAGGTGTGCGGAGCTGCAGACATCCAGCTGCAGattttctatgctgtttTAGACCAGATCTACCACAGCAAACCTCAGAACCGCTCCACCACAGAAATCCTGAAGGAGATGCAGCAGAAATTCTACGGCTTACCTTATACGCCCAATACGGCATGGCAGCTGAGATTCAGCCACCTGATTGGCTACGGGGCCAAGTACTATTCCTACCTCATGTCCCGGGCCGTGGCCTCAATGGTATGGAAACAGTGCTTCGTACAGGATCCTTTAAACAGGGACATGGGTGAGCGTTACCGTCAGGAGATGCTGGCCCATGGAGGAGCCAAAGAGCCCATGCTGATGGTGGAAGGGATGCTGAAGAGGCGGCCCACCATGGAGGACTTTGTGGATGCGCTGGTGTCTGAGCTCAACCCAAACTTTGAGACCTTCATCATGGACTCTGAAAGCTGAAAGAGGCCTCTGGCGCCACGGAAACGGACTTGTGCACTAAAGAAGCACACAGATGCCTGGCTAAGTGGCAGCCGGGTGCACGCTCATTCTTACTAAGTATCTTTACTTTGTAAGTTAATAGTCAGCGTTTTATATATTGCCGTTGTCCTCTTAAAGTCACATTGACTTATTTTGATGTATCTGGCTAATTCTGCTGTCAATATAAAGTAATATGGTAAGAATTAAAGAATTAAATTGCTACAAACCCTGAAAACTCCCGATCATCTCGGAATATTGATTATTGCAGATTATGGTAAACTGTGTATCACAGACACTTTCCCAATGCTCTGGACACCCTTGCGTCACCATTAATGATATTTCAACAGATTCCGCAGTAGCTTGTGCCAGGTCAGATCATAAAACCCTTTTGGGTTTGTACATGTTATTTTCACCTTTTTGTAGCACTCAACATTGTTAAAAATGAACAGAAAAATGTactctgtaatgtaatgtagcgctatacatttcattaaaatcactatttctatga

Function

symbol description
mipep Predicted to enable metalloendopeptidase activity. Predicted to be involved in peptide metabolic process and protein processing involved in protein targeting to mitochondrion. Located in mitochondrion. Implicated in combined oxidative phosphorylation deficiency 31.

NR:

description
PREDICTED: mitochondrial intermediate peptidase

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0046872 metal ion binding molecular_function
GO:0004222 metalloendopeptidase activity molecular_function

KEGG:

id description
K01410 MIPEP; mitochondrial intermediate peptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792854.1 True 3097 mRNA 0.46 19 23377094 23409078

Neighbor

gene id symbol gene type direction distance location
sacs sacs coding downstream 36002 23315058 ~ 23341092 (-)
trappc4 trappc4 coding downstream 85631 23289396 ~ 23291463 (-)
cfap45 NA coding downstream 93292 23278602 ~ 23283802 (-)
lbhl LOC102301737,LOC102196385,LOC100690809,LOC103154600,LOC108238121,LOC106945137 coding downstream 207887 23162202 ~ 23169207 (-)
LOC120546095 NA coding downstream 215016 23159296 ~ 23162078 (-)
brwd1 NA coding upstream 742 23409820 ~ 23446831 (-)
LOC120553253 NA coding upstream 40073 23449151 ~ 23452418 (-)
dscamb dscam,LOC103377590 coding upstream 165622 23574700 ~ 23693377 (-)
tubd1 tubd1,LOC102795212 coding upstream 379701 23788779 ~ 23792976 (-)
ssr3 ssr3,LOC106581450 coding upstream 551676 23960754 ~ 23964467 (-)
G19018 NA non-coding downstream 25670 23347437 ~ 23351424 (-)
G18963 rps25 non-coding downstream 82592 23291741 ~ 23294502 (-)
G18943 NA non-coding downstream 140248 23233513 ~ 23236846 (-)
LOC120546850 NA non-coding downstream 142548 23216766 ~ 23234546 (-)
G18923 NA non-coding downstream 180750 23195668 ~ 23196344 (-)
G19033 NA non-coding upstream 55885 23464963 ~ 23471724 (-)
G19045 NA non-coding upstream 155925 23565003 ~ 23565242 (-)
G19126 NA non-coding upstream 376160 23785238 ~ 23787687 (-)
G19137 gmps,LOC102797084 non-coding upstream 408487 23817565 ~ 23818438 (-)
G19158 NA non-coding upstream 574993 23984071 ~ 23984458 (-)
G18948 LOC103474743 other downstream 124674 23246603 ~ 23252420 (-)
G18885 gramd1b other downstream 228579 23139213 ~ 23148515 (-)
LOC120551419 LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978 other downstream 1369919 21983302 ~ 22007175 (-)
gdpd5b gdpd5,LOC103357216 other downstream 1666731 21664076 ~ 21710363 (-)
LOC120572205 NA other downstream 1761848 21610814 ~ 21615246 (-)
LOC120574680 NA other upstream 44469 23453547 ~ 23461044 (-)
atm atm,LOC102794456 other upstream 320410 23729488 ~ 23758826 (-)
slc33a1 slc33a1 other upstream 393437 23802515 ~ 23809452 (-)
G19140 gmps,LOC102797084 other upstream 414743 23823821 ~ 23827954 (-)
G19270 ptx3 other upstream 838953 24248031 ~ 24252913 (-)

Expression


Co-expression Network