LOC120570331


Basic Information

Item Value
gene id LOC120570331
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6634599 ~ 6635525 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818626.1
ATGGTAAACTCTACACAGGTTTCATATTTCACTTTTGGTGCATACTTTAATATTGGGCTCTTTAAATACTTATTTTTCATGATTATTATGTGTTTTTATGCTGTAATTATTTGTACCAATCTTTTGCTGATTGTGGTTATCTGTATGAACAGAAGCTTACATGAACCTATGTACCTTTTTCTGTGCAGCCTGTTTGTAAATGAACTGTATGGTAGTACAGGGTTGTTTCCATTCCTTCTGGTTCAGATCctctctgacattcacactgtttctgctcccttctgtttcctgcagatttaTTGTTTGAATGCATATGCAGCTATACAATTTATAAACTTATCCATCGTGTCTTATGACAGATATCTTGCTATCTGTTATCCTCTGCAATATAACACACGTATGACATATGACAAGGTTGCCATGCTTATTACTCTAACATGGTTATTTCCATTTTTTGCAATGGCTGTCCTGGTATTTTTAAGTTCATctttacagctgtgtgggaACATAATTAACAAAGTTTACTGTAACAACTATTATGTTGTCAAACTGGCCTGCTCTGACACAACAGTGAACAACATTTATGGACTCTTTATCACTTGTCTTTTAATCTTTGGTCCTCTCATTTTAATCCTTTACACATACTTTAAGAtctttaaagtgtgtttttctgGTTCTAAACAGACCAGACAGAAAGCTGTCAGTACCTGCACACCTCACCTCGCTTCCCTACTCAACTTTTCTTTTGGGGGTTTCTTTGAAATAGTACAGAGCAGGTTTGATATGAGCAGTGTACCCATGATGTTGCGTATATTTTTGTCATTATACTTTCTGACCTGCCAACCGATCTTTAACCCTTTAATGTTTGGTTTGCAAATGACTAAAATACGTAGCCTATGTAAAACTCTTGTCTTTggtaaaatgtaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818626.1 True 927 mRNA 0.35 1 6634599 6635525

Neighbor

gene id symbol gene type direction distance location
LOC120545416 NA coding upstream 16876 6616797 ~ 6617723 (+)
LOC120545410 NA coding upstream 21361 6612312 ~ 6613238 (+)
LOC120545404 NA coding upstream 26989 6599759 ~ 6607610 (+)
LOC120572346 NA coding upstream 43931 6589736 ~ 6590668 (+)
LOC120545393 NA coding upstream 82969 6550690 ~ 6551630 (+)
LOC120573309 NA coding downstream 2358 6637883 ~ 6638815 (+)
LOC120545443 NA coding downstream 29625 6665150 ~ 6670062 (+)
LOC120545448 NA coding downstream 63977 6699502 ~ 6709328 (+)
LOC120545475 NA coding downstream 88269 6723794 ~ 6724723 (+)
LOC120545480 NA coding downstream 93638 6729163 ~ 6734845 (+)
G14939 NA non-coding upstream 56146 6578222 ~ 6578453 (+)
G14930 NA non-coding upstream 122713 6511135 ~ 6511886 (+)
G14928 NA non-coding upstream 124625 6508571 ~ 6509974 (+)
G14917 NA non-coding upstream 139949 6494388 ~ 6494650 (+)
G14908 NA non-coding upstream 157453 6476674 ~ 6477146 (+)
LOC120572178 NA non-coding downstream 54506 6690031 ~ 6690891 (+)
G15012 NA non-coding downstream 308797 6944322 ~ 6991913 (+)
G15021 NA non-coding downstream 342274 6977799 ~ 6978105 (+)
G15032 NA non-coding downstream 381270 7016795 ~ 7017311 (+)
G15050 NA non-coding downstream 416661 7052186 ~ 7053965 (+)
spcs2 spcs2 other upstream 217090 6407985 ~ 6417509 (+)
rnf169 NA other upstream 230174 6393062 ~ 6404425 (+)
G14344 NA other upstream 1105980 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1217464 4801340 ~ 5417135 (+)
G14209 LOC102792843 other upstream 2107222 4500173 ~ 4527377 (+)
G15019 NA other downstream 337320 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 762576 7398101 ~ 7399141 (+)
G15234 NA other downstream 855840 7491365 ~ 7492057 (+)
rffl rffl other downstream 1171284 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 1191085 7826610 ~ 7828087 (+)

Expression


Co-expression Network