tmem199 (tmem199)


Basic Information

Item Value
gene id tmem199
gene name tmem199
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 17227524 ~ 17230365 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818775.1
GTACGTCATCGTGTCACAAGGCAAACAACATGGCTGCTCACTTGGAGATATTTATCTCTAGCACTTAGTTTAAACGCCGAATTTCAATGTATAATCATAATTAAAACCGTTAGGGATAGTTTTGGCTCCTTTAATTGTAGACATATTTTCACTGGCAGCTCGTGCTTTATTGAGAAAACGCTTGACAAACGGTATATTTTATCTAGATAGCTGCATCGCATTAACTCCGACCATCCTGTCAGAGTCATAGGGATTTAAACCATGGCATCTGCATTTGTTGTCGGGAATAAATTCAGAAATAAGGTCACGGAGTTATTAGAAAAGACGGACTCATCTCTGCCCCAGCGACTGAGAGAAGAACTGGAAGAGACTCTTGGATCACCACAACCAACCCTCTCCTTCAGTACAGCGAGAACACTCAAGAAATACCTTCAGGACAACGGGCATCCTTTCTACCTGCATGAGTTGTTGGAGGATAGCTCGCTGCACCTGCCTGAGGTTGTGAAGCCTCCCAGGAACCCCGAGCTTGTCAAACGTCTTGAGAGGATCAAAGCCAAACTTGCCAACGAGGAATACAACAGAATCACACGTAATGTCAACACTCAGAAAATCAACCGCAATGAAACATTAGCAGATTTTGGACGGCAAGTGCGGTCAGTCAAAGCAGTGGTGGCGACCATATTCAACTTCCTAGTCACCGTGGTTGCTGCTTTTGCCTGTTCGTATATGGCGAGTCAGTACCTATTCACTGACACTGCAGCGCGAGTAATATCGGCTGTGATCGCTGCATCTGTAGTCGGCCTGGCGGAGCTGTATGTGCTGGTCCGGACCATGGAAGGGGAACTAGGGGAACCATAGCAGTTACTCAAAAAGAACAagggaaaacacaaaaccagTGAACTGTAGCAGCCCTCAAAGCAGAACTTTGGCAACCCCACCGAGGCGCCCACTGATTCAATACAGACATCTCACTTTGCCATGAAAAGCTTGTGGACTTTTTgccttttatttgacaggaaAATTGGTGGATTTTTAAATACGGTTTAGGTTAAtttaaaaagtgatacaaatagCACTAAATGGAAGCTGAAACATTACAAGAAAGCAAATTAAAAATGACTGCATATCTGTTCTTTGACTTTAACTACTCCTGCTTTACATGACATTCCACCTGCCcagacttttaaaatgttttttaattacattaaaacatgaatcatattccttatttatttacagctattttgtattttaGATTTTTCCCCAAACCACAGCCCAAAAATAAAGGCTCATTTACTCATGA

Function

symbol description
tmem199 Predicted to act upstream of or within vacuolar proton-transporting V-type ATPase complex assembly. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in endomembrane system. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IIp. Orthologous to human TMEM199 (transmembrane protein 199).

NR:

description
PREDICTED: transmembrane protein 199

GO: NA

KEGG:

id description
K23542 TMEM199; TMEM199 family protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818775.1 True 1303 mRNA 0.42 6 17227524 17230365

Neighbor

gene id symbol gene type direction distance location
gemin4 NA coding downstream 64820 17155692 ~ 17162704 (-)
LOC120551331 NA coding downstream 277688 16947756 ~ 16949836 (-)
usf1 usf1 coding downstream 562842 16655490 ~ 16664682 (-)
LOC120548132 LOC104926451,LOC103375127,LOC106906251,LOC103154322 coding downstream 572184 16644120 ~ 16655340 (-)
ubash3bb ubash3b,LOC104926453 coding downstream 583641 16599794 ~ 16643883 (-)
LOC120544259 ecel1 coding upstream 274434 17504799 ~ 17634049 (-)
zgc:153039 LOC103359447,LOC103377809 coding upstream 435453 17665818 ~ 17743624 (-)
LOC120573061 LOC100706961,LOC103359448 coding upstream 888932 18119297 ~ 18124891 (-)
alp3 LOC103377813,LOC108248287 coding upstream 926750 18157115 ~ 18170945 (-)
psmd2 psmd2,LOC102798368 coding upstream 994147 18224512 ~ 18236516 (-)
G17642 NA non-coding downstream 7242 17187012 ~ 17220282 (-)
G17633 NA non-coding downstream 24781 17104827 ~ 17202743 (-)
G17641 NA non-coding downstream 74058 17152087 ~ 17153466 (-)
G17638 LOC103369551,LOC106930551,LOC103140705,LOC103474949 non-coding downstream 86476 17138463 ~ 17141048 (-)
G17637 NA non-coding downstream 86919 17136884 ~ 17140605 (-)
G17677 NA non-coding upstream 82597 17312962 ~ 17318177 (-)
G17693 ywhae,LOC103365420,LOC107397237,LOC103145207 non-coding upstream 89719 17320084 ~ 17327676 (-)
G17694 ywhae,LOC106612660,LOC106935707,LOC103365420 non-coding upstream 98065 17328430 ~ 17335208 (-)
G17696 NA non-coding upstream 141751 17372116 ~ 17443370 (-)
G17704 LOC102780293,LOC102202500,LOC102309172,LOC101469078 non-coding upstream 172855 17403220 ~ 17438310 (-)
G17597 NA other downstream 296530 16848161 ~ 16930994 (-)
sdhdb sdhd other downstream 1167116 16046008 ~ 16060408 (-)
G17287 NA other downstream 1508483 15695554 ~ 15719041 (-)
lyrm9 lyrm9 other downstream 1576477 15646641 ~ 15651047 (-)
si:ch1073-145m9.1 LOC104930674,LOC104957430,LOC102079100,LOC108239365,LOC105418711 other downstream 1901725 15318840 ~ 15325799 (-)
xaf1 LOC107094331 other upstream 242582 17472947 ~ 17478903 (-)
LOC120552194 NA other upstream 569634 17799999 ~ 17890661 (-)
zgc:165508 fam131a,LOC102799247 other upstream 897101 18127466 ~ 18151968 (-)
LOC120545639 eif4g1 other upstream 948648 18179013 ~ 18222893 (-)
fbxo46 fbxo46,LOC102786997 other upstream 2470862 19701227 ~ 19717307 (-)

Expression


Co-expression Network