LOC120570832


Basic Information

Item Value
gene id LOC120570832
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 2853218 ~ 2872402 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819406.1
gacacacaaacacacacatgctgcctGATTTCCTGTAAATGGAGAGGGGTGGAGATTTGCGAACATGACatgaaaaaggaactctgtgtgTTCAGTCGGTTCAGACTCCATTTTGGCGACCAAGCAGAAGGAGGGAAACAGAAGGCTGAGGCAGGACTGACTTCAGATCTGAAGATGAGTGATTTGGAGGAAGAGGACGGAGCAGAGTCTGTAGTAtctggctgtctgtctctgaagaGTGATCAGTCCAAAGGTCTTCCTCTACTCTTCAGCAATGATcctggaccctcagacacaaaAGTTCAGAACAACAGACGGAGAGCAGAGTCTGTAGTATCTGGCTGTCTTTCTCTGAAGAGTGATGAGTCCAAAGGTCTTCCTCTACTCTTCAGTAATGAACCTGGACCCTCGGACACAAAAGTTCAGAACAACAGACGGAGAGCAGAGTCTGTAATATCTGGCTGTCTTTCTCTGAAGAGTGATGAGTCCAAAGGTCTTCCTCTACTCTTCAGCAATGAACCTGGACCCTCGGACACAAAaaagaggaagaggagtgatGTTTCTGAGAAGATGCACCCGTCCGGATCCCAAACCAGAGCTGGACTGCAGGAAGCCGGTCGGACCAGCACTGTTCAAATGATTTCTAGTGTTCGGCATGGACATAAGATCATTCTGAAGAGGACATTTAAACTTGTGACTGAAGgagttgataaaacaggaagtgaaatCCTCCTCAACAGGATCTACACTGCGCTCTACATCACAGACGGACAGAGTGAAGAGGTTAATACCCAACATGAGGTGAGGCAGCTTGAGACAGCTTCCAAGATGGAGACCCTCCATGACACTCCAATCAAGTGCAGCGACATCTTTAAAGCCTTTCCTGaccaacagaaacacatcagaGTCGTTCTGACCATCGGTGTTGCTGGAATTGGAAAAACCTTCTCAGTGCAGAAGTTCTGTCTGGACTGGGCCGAGGGTTTGGAAAACCAAGATGTCAGTCTGGTGATTCCGCTTTCCTTCAGGGAGCTGAACTTGATCAAAGATGAGCAGTACAGTCTCCTGGAGCTGCTCCATGTTTTCCATCCAGCATTACAGGAAGTCACAGCAGAGCAGCTCACTGGTTCTGAAGTTCTCTTCATCTTTGACGGCCTGGATGAAAGCAGACTTTCAATGGATTTCATCAACAATGAGGCTGTTTCTGATGTCACACAGAAGTCATCAGTCAACGTGgtgctgacaaacctcatccagGGGAAGCTGCTTCCCTCGGCTCTCGTCTGGATAACTtcccgacctgcagcagccaatcagatccctcctgcgtGTGTCGACAGGGTAACTGAAGTACGAGGCTTCACTGACgaacagaaggaggagtacttcaggaagagaatCAGTGATGAAGAGCAgtccagcagaatcatctcccacatcaagacatccaggagcctccacatcatgtgtctgatcccagtcttctgctggatcactgctacagttctggaccaCATGTTGACTACAGACCAGAgtggagagctgcccaagaccctgactgacatgtactcacacttcctgctggttcagacaaagagaaagaagcaCAAGTATGATGAGGGATATGAGACAAGTCCAAAGGAGCTGACGGAGGCCGACAGTGAAGTTATTCTGAAGCTGGGGAGGCTGGCGTTTGAACAGCTGGAGAAAGGAAACATCATGTTCTACCAAGAAGACCTGGAGCACTGTGGTCTGGATGTCACAGACGTGGTGTACTCAGGAGTTTGTACAGAGATCTTCAAAAGAGAGAGTGTGATCTTCCAGAAAACAGTCTACTGCTTTGTTCATCTGAGCATTCAGGAGTTTTTGGCTGCAGTCTACCTGTTTCACTGTTACACCAACAAGAACACAGAGGTACTAGAGGACTTCCTGGGGAAGACGGCTTTGgctgatgatggtgatgatgactGGGACAATGACCATTACCAATCCCTTGATGTCTTCCTGAAAAAAGCCATGGAAAAATCCCTTGAAAGTAAAAATGGCCACCTGGACCTGTTTGTCCGCTTCCTTCATGGCCTCTCTCTGGAGTTCAACCAGAGACTCTTAGGAGGCCTGCTGGGTCAGGCAGACAACAGTCCAGAAATCCTCCAGAGAGCCATCAACAACCTGAAAGAGATGAACATATACAAGATCTCTCCTGACAGAAGCATCAACATCTTCCACTGTCTGACGGAGATGAACGACCACTCAGTTCATCAGGAGATCCAAGAGTTCTTGAAGTCAGAGGACAGATCAGAGAAGGAACTGTCTGTGTTCCATTGCTCAGCTTTGGCCTACATGCTGCAGATGTCAGAGGAGGTTTTGGATGAGTTGGACCTGAAGAAGTATAACTCATCAGACCAGGGACGACtgagactgattccagctgtgaGAAACTGCAGAAAGGCTCGACTTTCTGACTACTGGCTCTCTGAGACTCACTGTGAAGTTGTAGtctcagctctgaagtccaaccactcccatctgagagagctggacctgagtaaaaACTACCATCTGctggattcaggagtgaagtcTCTGTGtgctggactgaagagtccaaaCTGTAGACTAGAGTCTCTGAGattgACTTGGTGCAGCTTGTCAaagatcagctgtgcttctctggCCTCTGCGCTGAAATctaacccctcccatctgaaagAGCTGGACCTGAATCACAATGAGCTGctggattcaggagtgaagctgctgtgtggtttTCTGGAGAGTCCACAATGTAGACTAGAGACTCTGAGattgTGGGGCTGCAGTTTGTCAAAGATCAGCTGTGCTTCCCTGGCCTCAGCTCTAAAGTGCAACCCCTCCCAtatgagagagctggacctgagagGAAATGGCCTGCAGGATTCAGATGTGAAACTGCTGTGTGATCTtgtgaagagtccacactgtagACTGAAAACTCTGGAATGGTGGCCGTGATCTCCCTCAGAGTGATCAGAACGTTGGATGTGTTGGGACACTGTCCTCCTACACTGTCTctgctagtctcacattgccagacctaggGCCACAGCgatgcggaggaaggtctggcaacaggagcatacactcctggataggaggaaaaaacgcactgggttgtttgcatttcttttaaccaatcactgTGGTCTTCGACGGtactaagctctggacgcagcgacggtggctctgctgaATAGTCTCAGGAAGTAACTTGTTATTACAATGCAGTAGGTACGCCTTATAAAACTaagtaactttctgtcatatttgctgaaactgaccctatgttccagtagaactacatgaagcaggtcagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819406.1 True 3353 mRNA 0.48 11 2853218 2872402

Neighbor

gene id symbol gene type direction distance location
LOC120544728 NA coding upstream 35657 2805911 ~ 2817561 (+)
LOC120544717 NA coding upstream 53891 2797986 ~ 2799327 (+)
LOC120571388 NA coding upstream 68010 2711676 ~ 2785208 (+)
LOC120544561 NA coding upstream 93287 2742353 ~ 2759931 (+)
LOC120571598 NA coding upstream 119650 2732337 ~ 2733568 (+)
LOC120570793 NA coding downstream 16623 2889025 ~ 2934705 (+)
LOC120571294 NA coding downstream 62375 2934777 ~ 2940723 (+)
gmnc NA coding downstream 162407 3034809 ~ 3044150 (+)
LOC120554600 NA coding downstream 400577 3272979 ~ 3273169 (+)
LOC120554633 NA coding downstream 402075 3274477 ~ 3274667 (+)
G13921 NA non-coding upstream 6162 2846803 ~ 2847056 (+)
G13920 NA non-coding upstream 6853 2844055 ~ 2846365 (+)
LOC120571804 NA non-coding upstream 30363 2822160 ~ 2822855 (+)
G13535 NA non-coding upstream 85894 2595382 ~ 2767324 (+)
G13531 NA non-coding upstream 181615 2561855 ~ 2671603 (+)
G13929 NA non-coding downstream 6991 2879393 ~ 2879852 (+)
G13930 NA non-coding downstream 10413 2882815 ~ 2883942 (+)
G13931 NA non-coding downstream 13683 2886085 ~ 2886380 (+)
G13934 NA non-coding downstream 69071 2941473 ~ 3034709 (+)
G13925 NA non-coding downstream 89885 2962287 ~ 2980347 (+)
LOC120571130 NA other upstream 60373 2610872 ~ 2792845 (+)
G13555 NA other upstream 115030 2726319 ~ 2738188 (+)
LOC120571187 NA other upstream 558330 2263410 ~ 2294888 (+)
G13390 NA other upstream 1293555 1551864 ~ 1559663 (+)
G13262 NA other upstream 1571625 896198 ~ 1281593 (+)
zgc:162872 LOC103361195,LOC100694875,LOC101467947,LOC102198539,LOC102776046 other downstream 76232 2948634 ~ 2964772 (+)
LOC120544739 NA other downstream 105449 2977851 ~ 2996315 (+)
G14148 NA other downstream 1146842 4019244 ~ 4055085 (+)
LOC120571647 LOC103360213,LOC102310147 other downstream 1365169 4237571 ~ 4852575 (+)
LOC120570718 LOC103473932 other downstream 1491264 4363666 ~ 4449830 (+)

Expression


Co-expression Network