LOC120571072


Basic Information

Item Value
gene id LOC120571072
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 3087464 ~ 3165911 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819780.1
agagtggtgaagggaagagtagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGAAAACCTGGAGTGCCCCGACCTTATCACCgagtacatgcagaaacacaaggagaagaagaagcagggCAAGAGGAAAGTTGTCAGTAAGGCCTCGGGAAACTCAGAGGAGCGAGGGAGCAAGAGGATGAAGAAGaaacggagaggaggagggggaccCAAACGTTACTACTGtcaacactgtgacaaatccttcacaacatatggatatttaaagattcatcggagagttcacactggagagaatctACACAGTTGTGATctatgtggggcagctttcataCTACATTATCTACTAAAAGTACAtaaacgcattcacactggagaaaagccttacagctgtgatcaatgtggggcggCTTTCACACGAAAGAGCAGCCTAAGAAAACATCAACAAAATCACACTGAAGAaaagccttacagctgtgatcactgtggggcagctttcaaaCGACAGAGTACTCTAATAATACATcaatgcattcacactggagagaagccgtacagctgtgatcactgtggggcagctttcaatCGACAGAGTACTCTAATaatacatcaacgcattcacactggagaaaagccgtactggtgtgaacattGTGGAAAAACGTTTTCTagccttaaatctcaccagcgcattcacactggagagaagccgtactggtgtgaacaatgtggtaaAACTTTTGCTCAGAGTGGTAcccttaaatctcaccagcgcgttcacactggagagaagccgtactggtgtgaacaatgtggggaaATGTTTTCTCAGAATGCTGGCCTTAAATATCACcagcgtgttcacactggagagaagccgtaccgCTGTGATCTATGTGGTAAAACCTTTTCTCAGCGTGGTcaccttaaatctcaccagcatgttcacactggagagaagccttacagctgtgatctatgtggtaaaaccttttctgTGAGCAGTaaccttaaatctcaccagcgtgttcacactggagagaagccgtactggtgtgaacaatgtggggaaACGTTTTCTCAGAGTAATAGCCTTAAAAAACATcagcgtgttcacactggagagaagccgtactggtgtgaacaatgtgggaaaatgtTTTCTCATAGTAGTAGCCTTAACAAACATcagcgtgttcacactggagagaagccgtactgctgtgatcaatgtggggcagctttcacacaacagaGTACCCTAATaagacatcaacgcattcacactggagagaagccatacagctgtgatcagtgtggtaaaaccttttctcagagcggtgaccttaaatctcaccagcgtgttcacactggagagaagccgtactggtgtgaacaatgtgggaaaactttttctcagagTGGTCCCCTTAAAAcccatcaacgcattcacactggagagaagttgtactggtgtgaacaatgtggtaaAATGTTCTCTCGGAGTAGTAACCTTAAAAGACACCAgctcattcacactggagaaaagccgtactggtgtgaacaatgtgggaaaacattttctcagagTGGTCCCATTAAAACACATCAACGcgttcacacaggagagaagccgtactggtgtgaacattGTGGTAAAATGTTCTCTCGGAGTAGTAACCTTAAAAGACACCAgctcattcacactggagagaagccgtactggtgtgaacaatgtggggaaATGTTTTCTCAGAGTAGTCACCTTAAAAAACACCAGCGCGTTCACACTGCCTCGTTGTGAACATGTTTcagagccaagctgtttcctcctgcctcctcctcatgccctgatagctgtgttgttatattctgatcttctctccacattgaaggctgacca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819780.1 True 1929 mRNA 0.46 6 3087464 3165911

Neighbor

gene id symbol gene type direction distance location
ostn ostn,LOC102776327 coding downstream 77403 3001153 ~ 3010061 (-)
wdr74 wdr74 coding downstream 114747 2970130 ~ 2972717 (-)
LOC120544710 LOC103364778,LOC102782303,LOC102212015,LOC101467851,LOC101170765,LOC103393563 coding downstream 998155 2077680 ~ 2089309 (-)
LOC120544691 NA coding downstream 1032741 2041770 ~ 2054723 (-)
LOC120544682 NA coding downstream 1059515 2024856 ~ 2027949 (-)
LOC120571140 NA coding upstream 84261 3250172 ~ 3258908 (-)
LOC120554376 NA coding upstream 107765 3273676 ~ 3273783 (-)
LOC120554353 NA coding upstream 109267 3275178 ~ 3275285 (-)
LOC120554360 NA coding upstream 110771 3276682 ~ 3276791 (-)
LOC120554359 NA coding upstream 112261 3278172 ~ 3278279 (-)
G13984 NA non-coding downstream 72144 2977860 ~ 3015320 (-)
G13997 NA non-coding downstream 101890 2985324 ~ 2985574 (-)
G13991 NA non-coding downstream 118856 2964592 ~ 2968608 (-)
G13970 NA non-coding downstream 201834 2885295 ~ 2885630 (-)
G13969 NA non-coding downstream 203416 2882907 ~ 2884048 (-)
LOC120571770 NA non-coding upstream 236557 3402468 ~ 3410949 (-)
G14469 NA non-coding upstream 423578 3589489 ~ 3639043 (-)
G14481 NA non-coding upstream 524369 3690280 ~ 3690581 (-)
G14428 NA non-coding upstream 564689 3730600 ~ 3763944 (-)
G14499 NA non-coding upstream 616140 3782051 ~ 3874216 (-)
G13995 iws1 other downstream 102966 2981061 ~ 2984498 (-)
G13651 NA other downstream 1705743 1302896 ~ 1381721 (-)
LOC120571038 NA other downstream 1889721 1166598 ~ 1197743 (-)
G13587 NA other downstream 1889778 1127891 ~ 1197686 (-)
LOC120571545 NA other downstream 2109726 969648 ~ 977738 (-)
G14426 il1rap,LOC106536183,LOC107379882,LOC108229411,LOC106536182 other upstream 307026 3472937 ~ 3722632 (-)
LOC120544895 LOC102787186 other upstream 733542 3899453 ~ 4015956 (-)
LOC120571085 mb21d2 other upstream 862829 4028740 ~ 4055084 (-)
G14552 LOC102792843,LOC102297898 other upstream 1360163 4526074 ~ 5193378 (-)
G14579 NA other upstream 1897077 5062988 ~ 5111979 (-)

Expression


Co-expression Network