LOC120571101


Basic Information

Item Value
gene id LOC120571101
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 2124359 ~ 2541178 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819785.1
TCTCGGGCTTGCGGCGGGATAGTTGTGTTGTTTATTAGTGAGTtttaaacatagacagtataagaACGGTTTTAAGAAGACAGAGCTCCAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagacaagcagcagactgggactctgataccagccatgttcagGAGCCCTCAGCAGACGTCAAGCTGGCGACCGTAGCAGGAAAGAAGGGCATAaaggccgaggaggaggagcagcctgcagcacctcctgcagctgcagcagcagccgtgaaggaggaggaagaggaggaagaggagcagcctgcagcacTTCCTGCAGTTGAAGCCAtgaaggaggagaaagaggaggagtatGTAGTGGAGAAGGTGTTGGACCGCAGAGTGGTGAATGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGGACGTCGACCTTATCACTgagtacatgcagaaacacaaggagaagAACGAGAAGAAGAAGGGCAAGAGGAAAGTGGAGAAGaacgagaagaagaagaaaggcaaGAGGAATGTTGTCAGTGAGGCCTCGGGAAACTTAGAGGAGCGAAggagcaagaggaagaaggaggagaaacggagTGGAGAAGAGGGACCCAAACGTCACCACTGtcaacactgtgacaaatccttcacaacatctggatatttaaatattcatcggagagttcacactggagagaaaccttacagctgtgatcaatgtggggcagctttcacacgacAGAATACCCTAAAaatacatcaacgcattcacactaaAGAAAAACCTtacagctgtgaacaatgtggtaaaaccttttctcagagAAGTAACCTTACATGTCACCAGCATGTTCACACTAGAGACAAGCTACACAGCTGTGATctatgtggggcagctttcacacaaaaGAATTACCTAAAAACACATcgacgcattcacactggagataagCCTTACAGTTGTGATCAATGTGgtaaaaccttttctcagagtAGTAACCTTAAATGTCACcagcgtgttcacactggagacaaTCTACACAGCTGTGATCTATGTGGGTCAGTTTTCACACTACAGAGTAacctaaaaacacatcaacgcattcacactggagagaagccttacagctgtgatctatGTGGTAAAACATTTTCTGGGAGTAGTaaccttaaatctcaccagcgtgttcacactggaaagaagccgtactggtgtgaacaatgtgggaaaacattttatgaGAGTTGTGCCCTTAAaacacatcaacgcattcacactggagagaagccgtacagctgtgatcaatgtgatAAAACCTTTGCTCAGAGCAGTagccttaaatctcaccagcgtGTTCACACTAAAGAGaggccgtactggtgtgaacaatgtgggaaaactttttctcacGGTAGTGGCCTTAAaaaacatcaacgcattcacactggagataaaccttacagctgtgaacaatgtgggaaaactttttctcagagCGGTAACCTTAAAATACatcagcgcattcacactgcctcgttgtgaacatgtttccgacccaagctgtttcctcctgcctcctcctcatggCCTGATAGCTAAACGGACGCAACAgatcccatttttgcaaaccatacataattacaaggaaaaatattactgaaaatgcgcttcaggtgtttggatagatcaggag
>XM_039819795.1
GTTAGCTTCCCATTCTGCTGTTGCTAAGATTCAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagacaagcagcagactgggactctgataccagccatgttcagGAGCCCTCAGCAGACGTCAAGCTGGCGACCGTAGCAGGAAAGAAGGGCATAaaggccgaggaggaggagcagcctgcagcacctcctgcagctgcagcagcagccgtgaaggaggaggaagaggaggaagaggagcagcctgcagcacTTCCTGCAGTTGAAGCCAtgaaggaggagaaagaggaggagtatGTAGTGGAGAAGGTGTTGGACCGCAGAGTGGTGAATGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGGACGTCGACCTTATCACTgagtacatgcagaaacacaaggagaagAACGAGAAGAAGAAGGGCAAGAGGAAAGTGGAGAAGaacgagaagaagaagaaaggcaaGAGGAATGTTGTCAGTGAGGCCTCGGGAAACTTAGAGGAGCGAAggagcaagaggaagaaggaggagaaacggagTGGAGAAGAGGGACCCAAACGTCACCACTGtcaacactgtgacaaatccttcacaacatctggatatttaaatattcatcggagagttcacactggagagaaaccttacagctgtgatcaatgtggggcagctttcacacgacAGAATACCCTAAAaatacatcaacgcattcacactaaAGAAAAACCTtacagctgtgaacaatgtggtaaaaccttttctcagagAAGTAACCTTACATGTCACCAGCATGTTCACACTAGAGACAAGCTACACAGCTGTGATctatgtggggcagctttcacacaaaaGAATTACCTAAAAACACATcgacgcattcacactggagataagCCTTACAGTTGTGATCAATGTGgtaaaaccttttctcagagtAGTAACCTTAAATGTCACcagcgtgttcacactggagacaaTCTACACAGCTGTGATCTATGTGGGTCAGTTTTCACACTACAGAGTAacctaaaaacacatcaacgcattcacactggagagaagccttacagctgtgatctatGTGGTAAAACATTTTCTGGGAGTAGTaaccttaaatctcaccagcgtgttcacactggaaagaagccgtactggtgtgaacaatgtgggaaaacattttatgaGAGTTGTGCCCTTAAaacacatcaacgcattcacactggagagaagccgtacagctgtgatcaatgtgatAAAACCTTTGCTCAGAGCAGTagccttaaatctcaccagcgtGTTCACACTAAAGAGaggccgtactggtgtgaacaatgtgggaaaactttttctcacGGTAGTGGCCTTAAaaaacatcaacgcattcacactggagataaaccttacagctgtgaacaatgtgggaaaactttttctcagagCGGTAACCTTAAAATACatcagcgcattcacactgcctcgttgtgaacatgtttccgacccaagctgtttcctcctgcctcctcctcatggCCTGATAGCTAAACGGACGCAACAgatcccatttttgcaaaccatacataattacaaggaaaaatattactgaaaatgcgcttcaggtgtttggatagatcaggag
>XM_039819803.1
GAGAGATGGCCTTGCCTTCACATGTCCAGGCTATCCTCAGCACACTTTCTGCACCGTGTGCAAGACAGACTTCGATATCGGACACAAAGGAGCAACAGGAGCCCTCAGCAGACGTCAAGCTGGCGACCGTAGCAGGAAAGAAGGGCATAaaggccgaggaggaggagcagcctgcagcacctcctgcagctgcagcagcagccgtgaaggaggaggaagaggaggaagaggagcagcctgcagcacTTCCTGCAGTTGAAGCCAtgaaggaggagaaagaggaggagtatGTAGTGGAGAAGGTGTTGGACCGCAGAGTGGTGAATGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGGACGTCGACCTTATCACTgagtacatgcagaaacacaaggagaagAACGAGAAGAAGAAGGGCAAGAGGAAAGTGGAGAAGaacgagaagaagaagaaaggcaaGAGGAATGTTGTCAGTGAGGCCTCGGGAAACTTAGAGGAGCGAAggagcaagaggaagaaggaggagaaacggagTGGAGAAGAGGGACCCAAACGTCACCACTGtcaacactgtgacaaatccttcacaacatctggatatttaaatattcatcggagagttcacactggagagaaaccttacagctgtgatcaatgtggggcagctttcacacgacAGAATACCCTAAAaatacatcaacgcattcacactaaAGAAAAACCTtacagctgtgaacaatgtggtaaaaccttttctcagagAAGTAACCTTACATGTCACCAGCATGTTCACACTAGAGACAAGCTACACAGCTGTGATctatgtggggcagctttcacacaaaaGAATTACCTAAAAACACATcgacgcattcacactggagataagCCTTACAGTTGTGATCAATGTGgtaaaaccttttctcagagtAGTAACCTTAAATGTCACcagcgtgttcacactggagacaaTCTACACAGCTGTGATCTATGTGGGTCAGTTTTCACACTACAGAGTAacctaaaaacacatcaacgcattcacactggagagaagccttacagctgtgatctatGTGGTAAAACATTTTCTGGGAGTAGTaaccttaaatctcaccagcgtgttcacactggaaagaagccgtactggtgtgaacaatgtgggaaaacattttatgaGAGTTGTGCCCTTAAaacacatcaacgcattcacactggagagaagccgtacagctgtgatcaatgtgatAAAACCTTTGCTCAGAGCAGTagccttaaatctcaccagcgtGTTCACACTAAAGAGaggccgtactggtgtgaacaatgtgggaaaactttttctcacGGTAGTGGCCTTAAaaaacatcaacgcattcacactggagataaaccttacagctgtgaacaatgtgggaaaactttttctcagagCGGTAACCTTAAAATACatcagcgcattcacactgcctcgttgtgaacatgtttccgacccaagctgtttcctcctgcctcctcctcatggCCTGATAGCTAAACGGACGCAACAgatcccatttttgcaaaccatacataattacaaggaaaaatattactgaaaatgcgcttcaggtgtttggatagatcaggag
>XM_039819810.1
GCAACGTTCTACACGGGTAAATTAGAGCGGCGCACCCAAACACTAGCTTAGaaccttatatatatgtcaatgctcaGTGGGTGTCTTGACTCATTTGACTCCAGTGGTAACGTCAGTGTAACTCACCGCAGATATAACTTCATTAGATAGCACTATGCAGCTGCCTGTACAGATGTCGGACTTCTTCAGGCACCAACACTGAAAGCGTTGGAAGAACATCAGGAGGACGCTGGTAGCAAATgctaacctagctagctacactgttaGCATCTCAGCAGCTGTTCCGTCCACTTGAAGGCATCATTGAGTCCTACGATAGTCTAACGTTAAACAGACTAACGTTACTTACAGTCTACGATACCACAGATATCAACTAACGTGAATAGTTATTTAGCGTGCAGCGTGTGGTGGTGCTCGGTGAATGAGACAGCAACTCCTCTtggagagagcagaggagctCCGAGTTCTCCTGTTGGAGCCCTCAGCAGACGTCAAGCTGGCGACCGGAGCAGGAAAGAAGGACAAGAAGGccgaggaagaggagcagcctgcagcagcagtgaaggaggaggaggagcctgcagcacctcctgcagctgcagcagcagtgaaggagGAGGAGTATGTGGTGGAGAAGGTTTTGGACCGCAGAGTGGTGAAGGGAAGAGTAGAGTTCCTGCTGAAATGGAAGGGGTTCTCAGATGAGGATAACACATGGGAGCCTCAAGACAACCTGGAACCCGACCTTATCACTgagtacatgcagaaacacgaggaggaggaggagaaggaggacaagaggaaagttgtcagtgaggcctcggaagactcagaggagcgagggagcaagaggaagaagaaggagaaacggagTGGAGAAGAGGGACCCAAACGTCACCACTGtcaacactgtgacaaatccttcacaacatctggatatttaaatattcatcggagagttcacactggagagaaaccttacagctgtgatcaatgtggggcagctttcacacgacAGAATACCCTAAAaatacatcaacgcattcacactaaAGAAAAACCTtacagctgtgaacaatgtggtaaaaccttttctcagagAAGTAACCTTACATGTCACCAGCATGTTCACACTAGAGACAAGCTACACAGCTGTGATctatgtggggcagctttcacacaaaaGAATTACCTAAAAACACATcgacgcattcacactggagataagCCTTACAGTTGTGATCAATGTGgtaaaaccttttctcagagtAGTAACCTTAAATGTCACcagcgtgttcacactggagacaaTCTACACAGCTGTGATCTATGTGGGTCAGTTTTCACACTACAGAGTAacctaaaaacacatcaacgcattcacactggagagaagccttacagctgtgatctatGTGGTAAAACATTTTCTGGGAGTAGTaaccttaaatctcaccagcgtgttcacactggaaagaagccgtactggtgtgaacaatgtgggaaaacattttatgaGAGTTGTGCCCTTAAaacacatcaacgcattcacactggagagaagccgtacagctgtgatcaatgtgatAAAACCTTTGCTCAGAGCAGTagccttaaatctcaccagcgtGTTCACACTAAAGAGaggccgtactggtgtgaacaatgtgggaaaactttttctcacGGTAGTGGCCTTAAaaaacatcaacgcattcacactggagataaaccttacagctgtgaacaatgtgggaaaactttttctcagagCGGTAACCTTAAAATACatcagcgcattcacactgcctcgttgtgaacatgtttccgacccaagctgtttcctcctgcctcctcctcatggCCTGATAGCTAAACGGACGCAACAgatcccatttttgcaaaccatacataattacaaggaaaaatattactgaaaatgcgcttcaggtgtttggatagatcaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819785.1 False 1823 mRNA 0.46 5 2124359 2541178
XM_039819795.1 False 1766 mRNA 0.47 5 2124541 2541178
XM_039819803.1 False 1677 mRNA 0.46 4 2129307 2541178
XM_039819810.1 True 1970 mRNA 0.46 5 2507739 2541178

Neighbor

gene id symbol gene type direction distance location
LOC120571197 NA coding upstream 7366 2097601 ~ 2116993 (+)
LOC120570981 LOC101882356 coding upstream 1134288 985608 ~ 990071 (+)
shkbp1 shkbp1,LOC102789242 coding upstream 1282313 818125 ~ 842046 (+)
gpr171 NA coding upstream 1553863 553166 ~ 570496 (+)
LOC120570773 NA coding downstream 9883 2551061 ~ 2563179 (+)
LOC120570971 NA coding downstream 25457 2566635 ~ 2594437 (+)
LOC120571336 NA coding downstream 28775 2569953 ~ 2702680 (+)
LOC120544551 NA coding downstream 84195 2625373 ~ 2632329 (+)
LOC120571227 NA coding downstream 117689 2658867 ~ 2672888 (+)
G13497 NA non-coding upstream 3281 2120746 ~ 2121078 (+)
G13439 NA non-coding upstream 108529 1848730 ~ 2015830 (+)
G13476 NA non-coding upstream 126853 1997021 ~ 1997506 (+)
G13460 NA non-coding upstream 156354 1912698 ~ 1968005 (+)
G13452 NA non-coding upstream 172817 1893117 ~ 1951542 (+)
G13531 NA non-coding downstream 20677 2561855 ~ 2671603 (+)
G13535 NA non-coding downstream 54204 2595382 ~ 2767324 (+)
LOC120571804 NA non-coding downstream 280982 2822160 ~ 2822855 (+)
G13920 NA non-coding downstream 302877 2844055 ~ 2846365 (+)
G13921 NA non-coding downstream 305625 2846803 ~ 2847056 (+)
G13390 NA other upstream 564696 1551864 ~ 1559663 (+)
G13262 NA other upstream 842766 896198 ~ 1281593 (+)
G13286 NA other upstream 1125380 997866 ~ 998979 (+)
G13234 NA other upstream 1358382 765539 ~ 765977 (+)
triap1 triap1 other upstream 1677806 386373 ~ 446553 (+)
LOC120571130 NA other downstream 69694 2610872 ~ 2792845 (+)
G13555 NA other downstream 185141 2726319 ~ 2738188 (+)
zgc:162872 LOC103361195,LOC100694875,LOC101467947,LOC102198539,LOC102776046 other downstream 407456 2948634 ~ 2964772 (+)
LOC120544739 NA other downstream 436673 2977851 ~ 2996315 (+)
G14148 NA other downstream 1478066 4019244 ~ 4055085 (+)

Expression


Co-expression Network