LOC120571130


Basic Information

Item Value
gene id LOC120571130
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 2610872 ~ 2792845 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819832.1
CAACGTTCTACACGGGTAAAATAGAGAGGCGCACCCAAACACTAGCCTAGAGCATTCAGTGGGTGACTGAACCAGTGAACCCATTTGTTTCCAGTAGTAACGTCAGTGTAACTCACCGCAGATATAACTTCATTAGATAGCACTATGCAgctgtctgtacacatgttgGACTTTTTTCAGGCACCAACACTGAAAGCGTTGGAAGAACATCAGGAGGACGCTGGTAGCAAATgctaacctagctagctacaccGTTAGCATCTTGAGTCCTACGATAGTCTAACGTTAAACAGACTAACGGTACATACAGTCTACTATACCACAGATATCAACTAACGTTAATAGTTATTTAGCGTGCAGCGTGTGGTGGTGCTCGGTGAATGAGACAGCAACTCCTCTtggagagagcagaggagctCCGAGTTCTCCTGTTGAATCCAGAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcAGCGGAGCAACAAGATCCCCAGAAGACCAGCAGTAGACTGGGACTCTAATACCAGccatgttcagGAGCCCTCAGCAGATGTCAAGCTGGCGACCAGAGCAGGAAAGAAGGACAAGAAGGCTGAGGAGGAtgagcagcctgcagcagcagtgaaggaggaggaggagcagcctgcagctcctcctgcagctgcagcagtgaaggaggaagaggaggaggaggaggaggagcagcagcctgcagcagtgaaggaggaggaggaggagtatgtGGTGGAGAAGGTGTTGGGCCACAGAGTGGTGAAGGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCACAAGACAACCTGGACTGCCACGACCTTATCACCgagtacatgcagaaacacaaggagaatgaagagaagaagaaggagggcaagaggaagaagaaggagaaactgagaggaggagagggacccaaacgtcaccactgtcaacactgtgacaaatccttcacaacatctggatatttaaagattcatcagagagttcacactggacataatctacacagctgtgatcaatgtggggcagctttcataCTACAGCATCGCCTAAAaagacatcaacgcattcacactgaagAAAAGCCTTACAGCTGTGTTCAATGTGGGGCGGCTTTCACACAATTGAGTATCCTAAAAAGACATCAACTCATTCACACTGAAGAaaagccttacagctgtgatcagtGTGGGGCAACTTTCACACGAAAGAGTACCCTAATaatacatcaacgcattcacactggagagaagccttacagctgtgatcaatgtggtaaAACCTTTTCTAGGAGTGACAGCCTAGAAATCcaccgacgtgttcacactggagagaagccgtactggtgtgatcTATGTGGTACATCATTTTCTCAGAGTGGTCACCTAGAAAGCCACAGAattgttcacactggagataaaccgtacagctgtgaacaatgcGGGGCAGCATTCATGTATTTAAATAAGTTACAATCCCACcaacgtgttcacactggagagaagccgtactggtgtgaacaatgtggaaaAACGTTCTCTCAGAGTAGGTACCTTAAAAGACACCAGCGctttcacactggagagaagccgtactggtgtgaacaatgtgggaaaactttttctcacAGTACTGACCTTAAAAaacaccagcgcattcacacgggagagaagccgtactggtgtgaacaatgtggtaaAACTTTTTCTCTGAATGGTaaccttaaatctcaccagcgtGTTCACACTGCCTCGTGGTGAATATGTTTCTGAGCCAAGCggtttcctcctgcctcctcctcatgccctgatagctgtgttgttattttctgatcttctctccacattgaaggcAGACCAGCAGTAACTTTATCTTCTGAACAGCATGTATGTTATCCTGGCTACGAATACACATTACGCTCCCTCCCTTTTGAAGGGATTTATTCCACTCAAAATTAGTTTGTTTTCCTGTAATGAAATATTCTGAGTTCTAATGCTGCAGCGAAGAAGTATTTGTTGTTCTAAAtcacctggggtctcatttataaaactgtgcgtaggatccttactataagtgtgcgtacgcccaaaagcccaaattggcgtacgccgaaaaaaacacattatcaagtatttaaattacttagaaaaaacaattcaaaacacgcattggaaccAATTGGAAGGCTACACATTcactcatgtcaacaaagatggcggcgcgcgattgtgcagcggctactagctctcctgtcggtgtatatttatacaagtacagccacactgaactaatcaatacaggactacgatacaacacagccattacgagagccttccaggcggctcataacatcccggaggacatagccagaccggGCGCTCCAGGTTGTTGTCGGCGCTAGCACggcgagctagctaccggcaggatgagAAAATAAAGACCAGAGGTGGAACGGAGGACTGCGTTTCGTTGCCCAGCACGactcacctgacctggagccctgtcggtaatatacaggccattttatttactacgaaaacagcacactgccatctacatagcccccgattctaacgttagcacaagtttcGCTCACTGCTAACCATAATGAGCAAACTGCAGCATGATCACCTGGAGGGGATACAGGGAACTTTAACAAGGTGTCCTtggcccttgtgttgtccttctctcaaccttgaaaaaacacattttttcaacatttttgacgcttttttttcacgttttgtttttgctttttccaacat
>XM_039819842.1
CAACGTTCTACACGGGTAAAATAGAGAGGCGCACCCAAACACTAGCCTAGAGCATTCAGTGGGTGACTGAACCAGTGAACCCATTTGTTTCCAGTAGTAACGTCAGTGTAACTCACCGCAGATATAACTTCATTAGATAGCACTATGCAgctgtctgtacacatgttgGACTTTTTTCAGGCACCAACACTGAAAGCGTTGGAAGAACATCAGGAGGACGCTGGTAGCAAATgctaacctagctagctacaccGTTAGCATCTTGAGTCCTACGATAGTCTAACGTTAAACAGACTAACGGTACATACAGTCTACTATACCACAGATATCAACTAACGTTAATAGTTATTTAGCGTGCAGCGTGTGGTGGTGCTCGGTGAATGAGACAGCAACTCCTCTtggagagagcagaggagctCCGAGTTCTCCTGTTGAATCCAGAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcAGCGGAGCAACAAGATCCCCAGAAGACCAGCAGTAGACTGGGACTCTAATACCAGccatgttcagGAGCCCTCAGCAGATGTCAAGCTGGCGACCAGAGCAGGAAAGAAGGACAAGAAGGCTGAGGAGGAtgagcagcctgcagcagcagtgaaggaggaggaggagcagcctgcagctcctcctgcagctgcagcagtgaaggaggaagaggaggaggaggaggaggagcagcagcctgcagcagtgaaggaggaggaggaggagtatgtGGTGGAGAAGGTGTTGGGCCACAGAGTGGTGAAGGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCACAAGACAACCTGGACTGCCACGACCTTATCACCgagtacatgcagaaacacaaggagaatgaagagaagaagaaggagggcaagaggaagaagaaggagaaactgagaggaggagagggacccaaacgtcaccactgtcaacactgtgacaaatccttcacaacatctggatatttaaagattcatcagagagttcacactggacataatctacacagctgtgatcaatgtggggcagctttcataCTACAGCATCGCCTAAAaagacatcaacgcattcacactgaagAAAAGCCTTACAGCTGTGTTCAATGTGGGGCGGCTTTCACACAATTGAGTATCCTAAAAAGACATCAACTCATTCACACTGAAGAaaagccttacagctgtgatcagtGTGGGGCAACTTTCACACGAAAGAGTACCCTAATaatacatcaacgcattcacactggagagaagccttacagctgtgatcaatgtggtaaAACCTTTTCTAGGAGTGACAGCCTAGAAATCcaccgacgtgttcacactggagagaagccgtactggtgtgatcTATGTGGTACATCATTTTCTCAGAGTGGTCACCTAGAAAGCCACAGAattgttcacactggagataaaccgtacagctgtgaacaatgcGGGGCAGCATTCATGTATTTAAATAAGTTACAATCCCACcaacgtgttcacactggagagaagccgtactggtgtgaacaatgtggaaaAACGTTCTCTCAGAGTAGGTACCTTAAAAGACACCAGCGctttcacactggagagaagccgtactggtgtgaacaatgtgggaaaactttttctcacAGTACTGACCTTAAAAaacaccagcgcattcacacgggagagaagccgtactggtgtgaacaatgtggtaaAACTTTTTCTCTGAATGGTaaccttaaatctcaccagcgtGTTCACACTGCCTCGTGGTGAATATGTTTCTGAGCCAAGCggtttcctcctgcctcctcctcatgccctgatagctgtgttgttattttctgatcttctctccacattgaaggcAGACCAGCAGTAACTTTATCTTCTGAACAGCATGTATGTTATCCTGGCTACGAATACACATTACGCTCCCTCCCTTTTGAAGGGATTTATTCCACTCAAAATTAGTTTGTTTTCCTGTAATGAAATATTCTGAGTTCTAATGCTGCAGCGAAGAAGTATTTGTTGTTCTAAAtcacctggggtctcatttataaaactgtgcgtaggatccttactataagtgtgcgtacgcccaaaagcccaaattggcgtacgccgaaaaaaacacattatcaagtatttaaattacttagaaaaaacaattcaaaacacgcattggaaccAATTGGAAGGCTACACATTcactcatgtcaacaaagatggcggcgcgcgattgtgcagcggctactagctctcctgtcggtgtatatttatacaagtacagccacactgaactaatcaatacaggactacgatacaacacagccattacgagagccttccaggcggctcataacatcccggaggacatagccagaccggGCGCTCCAGGTTGTTGTCGGCGCTAGCACggcgagctagctaccggcaggatgagAAAATAAAGACCAGAGGTGGAACGGAGGACTGCGTTTCGTTGCCCAGCACGactcacctgacctggagccctgtcggtaatatacaggccattttatttactacgaaaacagcacactgccatctacatagcccccgattctaacgttagcacaagtttcGCTCACTGCTAACCATAATGAGCAAACTGCAGCATGATCACCTGGAGGGGATACAGGGAACTTTAACAAGGTGTCCTtggcccttgtgttgtccttctctcaaccttgaaaaaacacattttttcaacatttttgacgcttttttttcacgttttgtttttgctttttccaacat
>XR_005641197.1
TTATTATGGTTTTACACGCGAGCGTCAAAGGCGGAACTAATGTGCGACGCAACGTTCTACACGGGTAAAATAGAGAGGCGCACCCAAACACTAGCCTAGAGCATTCAGTGGGTGACTGAACCAGTGAACCCATTTGTTTCCAGTAGTAACGTCAGTGTAACTCACCGCAGATATAACTTCATTAGATAGCACTATGCAgctgtctgtacacatgttgGACTTTTTTCAGGCACCAACACTGAAAGCGTTGGAAGAACATCAGGAGGACGCTGGTAGCAAATgctaacctagctagctacaccGTTAGCATCTTGAGTCCTACGATAGTCTAACGTTAAACAGACTAACGGTACATACAGTCTACTATACCACAGATATCAACTAACGTTAATAGTTATTTAGCGTGCAGCGTGTGGTGGTGCTCGGTGAATGAGACAGCAACTCCTCTtggagagagcagaggagctCCGAGTTCTCCTGTTGGAGCCCTCAGCAGACATCAAGCTGGCGACCGGAGCAGGAAAGAAGGGCAAGaaggccgaggaggaggagcagcctgcaccacctcctgcagctgcagcagtgaaggaggaggaggagcctgcagcacctcctgcagcagtgaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819832.1 False 2846 mRNA 0.47 6 2610921 2792845
XM_039819842.1 True 2846 mRNA 0.47 5 2610921 2792845
XR_005641197.1 False 628 transcript 0.50 2 2610872 2626293

Neighbor

gene id symbol gene type direction distance location
LOC120570971 NA coding upstream 16435 2566635 ~ 2594437 (+)
LOC120570773 NA coding upstream 47693 2551061 ~ 2563179 (+)
LOC120571101 NA coding upstream 69694 2124359 ~ 2541178 (+)
LOC120544544 NA coding upstream 115662 2486924 ~ 2495210 (+)
LOC120570706 ltbp4 coding upstream 176538 2386670 ~ 2434334 (+)
LOC120544717 NA coding downstream 5141 2797986 ~ 2799327 (+)
LOC120544728 NA coding downstream 13066 2805911 ~ 2817561 (+)
LOC120570832 NA coding downstream 60373 2853218 ~ 2872402 (+)
LOC120570793 NA coding downstream 96180 2889025 ~ 2934705 (+)
LOC120571294 NA coding downstream 141932 2934777 ~ 2940723 (+)
G13518 NA non-coding upstream 145994 2461744 ~ 2464878 (+)
G13516 NA non-coding upstream 220383 2390149 ~ 2390489 (+)
LOC120571707 NA non-coding upstream 365411 2224837 ~ 2245461 (+)
G13497 NA non-coding upstream 489794 2120746 ~ 2121078 (+)
G13476 NA non-coding upstream 613366 1997021 ~ 1997506 (+)
LOC120571804 NA non-coding downstream 29315 2822160 ~ 2822855 (+)
G13920 NA non-coding downstream 51210 2844055 ~ 2846365 (+)
G13921 NA non-coding downstream 53958 2846803 ~ 2847056 (+)
G13929 NA non-coding downstream 86548 2879393 ~ 2879852 (+)
G13930 NA non-coding downstream 89970 2882815 ~ 2883942 (+)
LOC120571187 NA other upstream 315984 2263410 ~ 2294888 (+)
G13390 NA other upstream 1051209 1551864 ~ 1559663 (+)
G13262 NA other upstream 1329279 896198 ~ 1281593 (+)
G13286 NA other upstream 1611893 997866 ~ 998979 (+)
G13234 NA other upstream 1844895 765539 ~ 765977 (+)
zgc:162872 LOC103361195,LOC100694875,LOC101467947,LOC102198539,LOC102776046 other downstream 155789 2948634 ~ 2964772 (+)
LOC120544739 NA other downstream 185006 2977851 ~ 2996315 (+)
G14148 NA other downstream 1226399 4019244 ~ 4055085 (+)
LOC120571647 LOC103360213,LOC102310147 other downstream 1444726 4237571 ~ 4852575 (+)
LOC120570718 LOC103473932 other downstream 1570821 4363666 ~ 4449830 (+)

Expression


Co-expression Network