LOC120571197


Basic Information

Item Value
gene id LOC120571197
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 2097601 ~ 2116993 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819978.1
AGTTTGCCGACTGTTGTTTTAGctgtgtgtggatgtgaggaaaaggagaggagacagcagcTCCTGAATATCTCTGCGTGCTTTGATTTGTACTGAACAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagacaagcagcagactgggactctgataccagccatgttcagGCGCCCTCAGCAGACGTCAAGCTGGCGACCGGAGCAGGAAAGAAGGACATaaaggcagaggaggaggagcagcctgcagcacctcctgcagctgcagcagcagtgaaggaggaggaggaggagcagcagcctGTAGCACTTCCTGcagttgcagcagcagcagcagcggtgaagaaggaggaagaggaggagtatGTGGTGGAGAATATTTTGGACTGCAGAGTGGTGAACGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGGACGTCGACCTTATCACCgagtacatgcagaaacacgaggaggaggaggaggaggaggaggagaagaagaaggaggaggaggaggacgacaagaggaaagttgtcagtgaggCCTCAGGAGACTCAGAGGAACgagggagcaagaggaagaagaaggaggagaaacggagaggaggagagggacccaAACGTCACCACTGTCAACACTGTGACAAATACTTCACAAGatctggatatttaaagattcatcagagagttcacactggagagaagccttacagctgtgatctatgtggtaaaaccttttctgagAGTGGTcaccttaaatctcaccagcgcattcacacaagagagaagccgtactggtgtgaacaatgtggtaaAACTTTTTCTCATAGTAGTGACCTTAAAAAACATCAGCGccttcacacaggagagaagccgtactggtgtgaacaatgtgggaaaaccttttctcagagtGGTAACCTAGAAAGCCACagacgtgttcacactggagataaaccgtacagctgtgaacaatgtggggcagcattcacacatttaaataacttaaaatctcaccgacgtgttcacactggagagaagccatacTGGTgcgaacaatgtgggaaaacattTTCTTACAGTGGGGCCCTTAAAAgacaccagcgcattcacactgcctcgttgtgaacatgtttccgagccaagctgtttcctcctgcctcgtcctcatgccctgatagctgtgttgttattttctgatcttctctccacattgaaggctgaccagcAGTAACTTTATCTTCTGAATGGCATgtattgatagatagatagatagatagatagatagatag
>XM_039819987.1
AGTTTGCCGACTGTTGTTTTAGctgtgtgtggatgtgaggaaaaggagaggagacagcagcTCCTGAATATCTCTGCGTGCTTTGATTTGTACTGAACAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagacaagcagcagactgggactctgataccagccatgttcagGCGCCCTCAGCAGACGTCAAGCTGGCGACCGGAGCAGGAAAGAAGGACATaaaggcagaggaggaggagcagcctgcagcacctcctgcagctgcagcagcagtgaaggaggaggaggaggagcagcagcctGTAGCACTTCCTGcagttgcagcagcagcagcagcggtgaagaaggaggaagaggaggagtatGTGGTGGAGAATATTTTGGACTGCAGAGTGGTGAACGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGGACGTCGACCTTATCACCgagtacatgcagaaacacgaggaggaggaggaggaggaggaggagaagaagaaggaggaggaggaggacgacaagaggaaagttgtcagtgaggCCTCAGGAGACTCAGAGGAACgagggagcaagaggaagaagaaggagaaacggagaggaggagagggacccaAACGTCACCACTGTCAACACTGTGACAAATACTTCACAAGatctggatatttaaagattcatcagagagttcacactggagagaagccttacagctgtgatctatgtggtaaaaccttttctgagAGTGGTcaccttaaatctcaccagcgcattcacacaagagagaagccgtactggtgtgaacaatgtggtaaAACTTTTTCTCATAGTAGTGACCTTAAAAAACATCAGCGccttcacacaggagagaagccgtactggtgtgaacaatgtgggaaaaccttttctcagagtGGTAACCTAGAAAGCCACagacgtgttcacactggagataaaccgtacagctgtgaacaatgtggggcagcattcacacatttaaataacttaaaatctcaccgacgtgttcacactggagagaagccatacTGGTgcgaacaatgtgggaaaacattTTCTTACAGTGGGGCCCTTAAAAgacaccagcgcattcacactgcctcgttgtgaacatgtttccgagccaagctgtttcctcctgcctcgtcctcatgccctgatagctgtgttgttattttctgatcttctctccacattgaaggctgaccagcAGTAACTTTATCTTCTGAATGGCATgtattgatagatagatagatagatagatagatagataga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819978.1 True 1419 mRNA 0.49 4 2097601 2116992
XM_039819987.1 False 1417 mRNA 0.49 4 2097601 2116993

Neighbor

gene id symbol gene type direction distance location
LOC120570981 LOC101882356 coding upstream 1107530 985608 ~ 990071 (+)
shkbp1 shkbp1,LOC102789242 coding upstream 1255555 818125 ~ 842046 (+)
gpr171 NA coding upstream 1527105 553166 ~ 570496 (+)
LOC120571101 NA coding downstream 7366 2124359 ~ 2541178 (+)
LOC120571617 NA coding downstream 21016 2138009 ~ 2138881 (+)
LOC120571219 NA coding downstream 91988 2208981 ~ 2223970 (+)
LOC120544531 NA coding downstream 128626 2245619 ~ 2251293 (+)
LOC120570706 ltbp4 coding downstream 269677 2386670 ~ 2434334 (+)
G13439 NA non-coding upstream 81771 1848730 ~ 2015830 (+)
G13476 NA non-coding upstream 100095 1997021 ~ 1997506 (+)
G13460 NA non-coding upstream 129596 1912698 ~ 1968005 (+)
G13452 NA non-coding upstream 146059 1893117 ~ 1951542 (+)
G13451 NA non-coding upstream 147083 1945899 ~ 1950518 (+)
G13497 NA non-coding downstream 3753 2120746 ~ 2121078 (+)
LOC120571707 NA non-coding downstream 107844 2224837 ~ 2245461 (+)
G13516 NA non-coding downstream 273156 2390149 ~ 2390489 (+)
G13518 NA non-coding downstream 344751 2461744 ~ 2464878 (+)
G13531 NA non-coding downstream 444862 2561855 ~ 2671603 (+)
G13390 NA other upstream 537938 1551864 ~ 1559663 (+)
G13262 NA other upstream 816008 896198 ~ 1281593 (+)
G13286 NA other upstream 1098622 997866 ~ 998979 (+)
G13234 NA other upstream 1331624 765539 ~ 765977 (+)
triap1 triap1 other upstream 1651048 386373 ~ 446553 (+)
LOC120571187 NA other downstream 146417 2263410 ~ 2294888 (+)
LOC120571130 NA other downstream 493879 2610872 ~ 2792845 (+)
G13555 NA other downstream 609326 2726319 ~ 2738188 (+)
zgc:162872 LOC103361195,LOC100694875,LOC101467947,LOC102198539,LOC102776046 other downstream 831641 2948634 ~ 2964772 (+)
LOC120544739 NA other downstream 860858 2977851 ~ 2996315 (+)

Expression


Co-expression Network