LOC120571206


Basic Information

Item Value
gene id LOC120571206
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 1950033 ~ 1968015 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819999.1
ACCTTTCCAGTGAGGATAACACATGGGAGCCACAAGACAACCTGGACTGCCCCGACCTTATCACCgagtacatgcagaaacacaaggaggaggtgaagaagaaggagggcaagaggagagttgtcagtgaggcctcgggagactcagaggagcgaaggagcaagaggaagaaggagaagaaacggagAGTAGGAGAGGGACCTAAACGTGACCACTGtcaacactgtgacaaatccttcacaacatctggatatttaaagattcatcagagagttcactCTGGAGAGAGTctacacagctgtgatcaatgtggggcagctttcacacgacAGAGTACCCTAAAaatacatcaacgcattcacactggagagaagccttacagctgtgatcaatgtggggcagctttcacactacGGAGTACCCTAAAaatacatcaacgcattcacactgaggaaaagccttacagctgtgatcagtGTGGTAAAACTTTTACTCATAGCGGTagccttaaatctcaccagagcgttcacacaggagagaagccgtactggtgtgaacaatgtggggaaACCTTTTCTCATAGTAATGGCTttaaatctcaccagcgcattcacactggagagaagccgtactggtgtgatcaATGTGGTAAAACCTTTTCTCATAGTAATGgccttaaatctcaccagcgcattcacactggagagaagccgtactggtgtgatcaatgtggtaaaacgttttctcagagtagtaggcttaaatctcaccagcttgttcacactggagagaagctgccctggtgtgaacaatgtgggaaaaccttTTCTAGGAGTGATTATTTAAAAAGCcaccgacgtgttcacactggagagaagccctactggtgtgaacaatgtggtaaAACCTTTTCTCATAGTCATGgccttaaatctcaccagcgcattcacactggagagaagccgtactggtgtgaacagtGTGGTAAAACtttttctgacagtagtgcgtTTAAAactcaccagcgcattcacactggagagaagccgtactggtgtgaacaatgtggtaaAACTTTTTCTGACAGAAGTAACTTTAAATCTCACCAGCGCGCTCACATTGCCTCGTAGTGAACATGTTTCcgagccaagctgtttcctcctgcctcctcctcatgccctgatagctgtgttgttattttctgattttctctccacattgaaggctgaccagcAGTAACTTTATCTTCTGAACAGGATGTATGTTATCCTGGACTACACATTAGGCTCCCTCCCTTTGAAGGGATTTATTCCACTCAGAATTAGTTTGTTTTCCTGTAATAAAATTCAGGGATCAACTGCTAGTGCTTTTTAACTAATGCTGCAGCGAAgaagtgtttgttgttgttaattAATCACCTTGTAAATACAATTTACAAAAATCCCCATCGCTGTTTACTAAggttaagacaaaaaaaaagaagcaaacctTCATAACTGACCAGCTTTTATCAgaacatggctgctgctgcttaaaaaatgacttgaacagttagggccctatcttgcacccagcgcaatagcctttgtacaccgacgcatgtatcattcctattttgcacccgacg
>XM_039820009.1
ACCTTTCCAGTGAGGATAACACATGGGAGCCACAAGACAACCTGGACTGCCCCGACCTTATCACCgagtacatgcagaaacacaaggaggaggtgaagaagaaggagggcaagaggagagttgtcagtgaggcctcgggagactcagaggagcgaaggagcaagaggaagaaggagaaacggagAGTAGGAGAGGGACCTAAACGTGACCACTGtcaacactgtgacaaatccttcacaacatctggatatttaaagattcatcagagagttcactCTGGAGAGAGTctacacagctgtgatcaatgtggggcagctttcacacgacAGAGTACCCTAAAaatacatcaacgcattcacactggagagaagccttacagctgtgatcaatgtggggcagctttcacactacGGAGTACCCTAAAaatacatcaacgcattcacactgaggaaaagccttacagctgtgatcagtGTGGTAAAACTTTTACTCATAGCGGTagccttaaatctcaccagagcgttcacacaggagagaagccgtactggtgtgaacaatgtggggaaACCTTTTCTCATAGTAATGGCTttaaatctcaccagcgcattcacactggagagaagccgtactggtgtgatcaATGTGGTAAAACCTTTTCTCATAGTAATGgccttaaatctcaccagcgcattcacactggagagaagccgtactggtgtgatcaatgtggtaaaacgttttctcagagtagtaggcttaaatctcaccagcttgttcacactggagagaagctgccctggtgtgaacaatgtgggaaaaccttTTCTAGGAGTGATTATTTAAAAAGCcaccgacgtgttcacactggagagaagccctactggtgtgaacaatgtggtaaAACCTTTTCTCATAGTCATGgccttaaatctcaccagcgcattcacactggagagaagccgtactggtgtgaacagtGTGGTAAAACtttttctgacagtagtgcgtTTAAAactcaccagcgcattcacactggagagaagccgtactggtgtgaacaatgtggtaaAACTTTTTCTGACAGAAGTAACTTTAAATCTCACCAGCGCGCTCACATTGCCTCGTAGTGAACATGTTTCcgagccaagctgtttcctcctgcctcctcctcatgccctgatagctgtgttgttattttctgattttctctccacattgaaggctgaccagcAGTAACTTTATCTTCTGAACAGGATGTATGTTATCCTGGACTACACATTAGGCTCCCTCCCTTTGAAGGGATTTATTCCACTCAGAATTAGTTTGTTTTCCTGTAATAAAATTCAGGGATCAACTGCTAGTGCTTTTTAACTAATGCTGCAGCGAAgaagtgtttgttgttgttaattAATCACCTTGTAAATACAATTTACAAAAATCCCCATCGCTGTTTACTAAggttaagacaaaaaaaaagaagcaaacctTCATAACTGACCAGCTTTTATCAgaacatggctgctgctgcttaaaaaatgacttgaacagttagggccctatcttgcacccagcgcaatagcctttgtacaccgacgcatgtatcattcctattttgcacccgacg
>XM_039820020.1
CCCGACCTTATCACCgagtacatgcagaaacacaaggaggaggtgaagaagaaggagggcaagaggagagttgtcagtgaggcctcgggagactcagaggagcgaaggagcaagaggaagaaggagaatggaacggatcgcaaatggatACGGATGAGAAACGTAAAAAAAGCTCAACCCTAGCTGCTCCCTCAGCCGAATGaaacggagAGTAGGAGAGGGACCTAAACGTGACCACTGtcaacactgtgacaaatccttcacaacatctggatatttaaagattcatcagagagttcactCTGGAGAGAGTctacacagctgtgatcaatgtggggcagctttcacacgacAGAGTACCCTAAAaatacatcaacgcattcacactggagagaagccttacagctgtgatcaatgtggggcagctttcacactacGGAGTACCCTAAAaatacatcaacgcattcacactgaggaaaagccttacagctgtgatcagtGTGGTAAAACTTTTACTCATAGCGGTagccttaaatctcaccagagcgttcacacaggagagaagccgtactggtgtgaacaatgtggggaaACCTTTTCTCATAGTAATGGCTttaaatctcaccagcgcattcacactggagagaagccgtactggtgtgatcaATGTGGTAAAACCTTTTCTCATAGTAATGgccttaaatctcaccagcgcattcacactggagagaagccgtactggtgtgatcaatgtggtaaaacgttttctcagagtagtaggcttaaatctcaccagcttgttcacactggagagaagctgccctggtgtgaacaatgtgggaaaaccttTTCTAGGAGTGATTATTTAAAAAGCcaccgacgtgttcacactggagagaagccctactggtgtgaacaatgtggtaaAACCTTTTCTCATAGTCATGgccttaaatctcaccagcgcattcacactggagagaagccgtactggtgtgaacagtGTGGTAAAACtttttctgacagtagtgcgtTTAAAactcaccagcgcattcacactggagagaagccgtactggtgtgaacaatgtggtaaAACTTTTTCTGACAGAAGTAACTTTAAATCTCACCAGCGCGCTCACATTGCCTCGTAGTGAACATGTTTCcgagccaagctgtttcctcctgcctcctcctcatgccctgatagctgtgttgttattttctgattttctctccacattgaaggctgaccagcAGTAACTTTATCTTCTGAACAGGATGTATGTTATCCTGGACTACACATTAGGCTCCCTCCCTTTGAAGGGATTTATTCCACTCAGAATTAGTTTGTTTTCCTGTAATAAAATTCAGGGATCAACTGCTAGTGCTTTTTAACTAATGCTGCAGCGAAgaagtgtttgttgttgttaattAATCACCTTGTAAATACAATTTACAAAAATCCCCATCGCTGTTTACTAAggttaagacaaaaaaaaagaagcaaacctTCATAACTGACCAGCTTTTATCAgaacatggctgctgctgcttaaaaaatgacttgaacagttagggccctatcttgcacccagcgcaatagcctttgtacaccgacgcatgtatcattcctattttgcacccgacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819999.1 False 1627 mRNA 0.44 3 1950033 1968015
XM_039820009.1 False 1624 mRNA 0.45 2 1950033 1968015
XM_039820020.1 True 1650 mRNA 0.44 3 1950033 1967965

Neighbor

gene id symbol gene type direction distance location
LOC120544669 NA coding downstream 5813 1795420 ~ 1944220 (-)
LOC120544676 NA coding downstream 7006 1929477 ~ 1943027 (-)
LOC120571592 NA coding downstream 35614 1912705 ~ 1914419 (-)
LOC120571537 NA coding downstream 65299 1880108 ~ 1884734 (-)
LOC120570781 NA coding downstream 73034 1851113 ~ 1876999 (-)
LOC120571401 NA coding upstream 26731 1994746 ~ 2019146 (-)
LOC120544682 NA coding upstream 56841 2024856 ~ 2027949 (-)
LOC120544691 NA coding upstream 73755 2041770 ~ 2054723 (-)
LOC120544710 LOC103364778,LOC102782303,LOC102212015,LOC101467851,LOC101170765,LOC103393563 coding upstream 109665 2077680 ~ 2089309 (-)
wdr74 wdr74 coding upstream 1002115 2970130 ~ 2972717 (-)
G13734 NA non-coding downstream 87327 1804306 ~ 1862706 (-)
G13743 NA non-coding downstream 94857 1853232 ~ 1855176 (-)
G13738 NA non-coding downstream 123083 1821476 ~ 1826950 (-)
G13656 NA non-coding downstream 128624 1818062 ~ 1821409 (-)
G13723 NA non-coding downstream 245021 1704488 ~ 1705012 (-)
LOC120571691 NA non-coding upstream 18964 1986979 ~ 1987408 (-)
G13775 NA non-coding upstream 88501 2056516 ~ 2056848 (-)
G13795 NA non-coding upstream 253446 2221461 ~ 2225903 (-)
G13828 NA non-coding upstream 442126 2410141 ~ 2439620 (-)
G13817 NA non-coding upstream 453840 2421855 ~ 2439154 (-)
G13651 NA other downstream 568312 1302896 ~ 1381721 (-)
LOC120571038 NA other downstream 752290 1166598 ~ 1197743 (-)
G13587 NA other downstream 752347 1127891 ~ 1197686 (-)
LOC120571545 NA other downstream 972295 969648 ~ 977738 (-)
si:ch211-137a8.2 NA other downstream 1199530 740452 ~ 750503 (-)
G13995 iws1 other upstream 1013046 2981061 ~ 2984498 (-)
LOC120570817 NA other upstream 1088714 3056729 ~ 3228824 (-)
G14426 il1rap,LOC106536183,LOC107379882,LOC108229411,LOC106536182 other upstream 1504922 3472937 ~ 3722632 (-)
LOC120544895 LOC102787186 other upstream 1931438 3899453 ~ 4015956 (-)
LOC120571085 mb21d2 other upstream 2060725 4028740 ~ 4055084 (-)

Expression


Co-expression Network