LOC120571318


Basic Information

Item Value
gene id LOC120571318
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 902347 ~ 952303 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820204.1
TCAGTTCCAGTCCACCACTAACTGATTAATGAACTGAATGTGTATCTGTTGTTCCCCTCCTGACCTCCAGGTGGCGGCgttctttcattttaaactttaatcTGAAAAACCCTGACTTGGAGGAAACCGGAAGTCTCGTTGTTTCACTGTGATCTCGGGCTGGCGGCGGGATAGTTGTGTTGTTTATTAGTGAGTtttaaacatagacagtataagaACGGTTTTAAGAAGACAGAGCTCCAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcatcggagcaacaaggtccccagaagaccagcagcagactgggactctgataccagccatgttcagGCACCCTCAGCAGACGTCAAGCTGGCGACCGTAGCAGGAAAGAAGGGCATaaaggctgaggaggaggagcagactgcagcacctcctgcagctgcagcagcagccgtgaaggaggaggaagaggaagaggaggagcagcctgtagcacctcctgcagctgcagcagcagccgtgaaggaggagaaagaggaggagtatGTAGTGGAGAAGGTGTTGGACCGCAGAGTGGTGAAGGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGATGATAAGACATGGGAGCCGCAAGACAACCTGGACGTCGACCTTATCACTgagtacatgcagaaacacaaggagaagAACGAGAAGAAGAAGGGCAAGAGGAAAGTGGAGAAGAACGAGAAGAAGAAAGGCAagaggaaagttgtcagtgaggcctcgggagactcagaggagcgagggagcaagaggaagaaggaggaggtgagCATAGGAAAGAGGTTACCCCAGACTGAAGATTCCCAAAAATCTAATCTCAATATTAATGAATATTAAAACAGCGCAAAAAAGGAGGAatgtaaatgat
>XM_039820213.1
TAAATTAGAGCGGCGCACCCAACCACTAGGCTGCAGCGTGCAGCGTGTGGTGGTGCTCGGTGAATGAGACAGCAACTCCTCTTGGAGAGAGCAGAGAAGCTCCGAGTTCTCCTGTTGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcatcggagcaacaaggtccccagaagaccagcagcagactgggactctgataccagccatgttcagGCACCCTCAGCAGACGTCAAGCTGGCGACCGTAGCAGGAAAGAAGGGCATaaaggctgaggaggaggagcagactgcagcacctcctgcagctgcagcagcagccgtgaaggaggaggaagaggaagaggaggagcagcctgtagcacctcctgcagctgcagcagcagccgtgaaggaggagaaagaggaggagtatGTAGTGGAGAAGGTGTTGGACCGCAGAGTGGTGAAGGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGATGATAAGACATGGGAGCCGCAAGACAACCTGGACGTCGACCTTATCACTgagtacatgcagaaacacaaggagaagAACGAGAAGAAGAAGGGCAAGAGGAAAGTGGAGAAGAACGAGAAGAAGAAAGGCAagaggaaagttgtcagtgaggcctcgggagactcagaggagcgagggagcaagaggaagaaggaggaggtgagCATAGGAAAGAGGTTACCCCAGACTGAAGATTCCCAAAAATCTAATCTCAATATTAATGAATATTAAAACAGCGCAAAAAAGGAGGAatgtaaatgat
>XM_039820216.1
TCAGTTCCAGTCCACCACTAACTGATTAATGAACTGAATGTGTATCTGTTGTTCCCCTCCTGACCTCCAGGTGGCGGCgttctttcattttaaactttaatcTGAAAAACCCTGACTTGGAGGAAACCGGAAGTCTCGTTGTTTCACTGTGATCTCGGGCTGGCGGCGGGATAGTTGTGTTGTTTATTAGTGAGTtttaaacatagacagtataagaACGGTTTTAAGAAGACAGAGCTCCAGGTAAACccgcacacactcactcagAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcatcggagcaacaaggtccccagaagaccagcagcagactgggactctgataccagccatgttcagGCACCCTCAGCAGACGTCAAGCTGGCGACCGTAGCAGGAAAGAAGGGCATaaaggctgaggaggaggagcagactgcagcacctcctgcagctgcagcagcagccgtgaaggaggaggaagaggaagaggaggagcagcctgtagcacctcctgcagctgcagcagcagccgtgaaggaggagaaagaggaggagtatGTAGTGGAGAAGGTGTTGGACCGCAGAGTGGTGAAGGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGATGATAAGACATGGGAGCCGCAAGACAACCTGGACGTCGACCTTATCACTgagtacatgcagaaacacaaggagaagAACGAGAAGAAGAAGGGCAAGAGGAAAGTGGAGAAGAACGAGAAGAAGAAAGGCAagaggaaagttgtcagtgaggcctcgggagactcagaggagcgagggagcaagaggaagaaggaggaggtgagCATAGGAAAGAGGTTACCCCAGACTGAAGATTCCCAAAAATCTAATCTCAATATTAATGAATATTAAAACAGCGCAAAAAAGGAGGAatgtaaatgat

Function

GO: NA

KEGG:

id description
ko03018 RNA degradation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820204.1 False 976 mRNA 0.50 4 902347 952303
XM_039820213.1 False 850 mRNA 0.52 4 902347 913370
XM_039820216.1 True 1000 mRNA 0.50 4 902347 952303

Neighbor

gene id symbol gene type direction distance location
LOC120549306 NA coding downstream 113280 786680 ~ 789067 (-)
LOC120573127 NA coding downstream 123680 766889 ~ 778667 (-)
plekhg2 plekhg2,LOC103150908 coding downstream 188652 473553 ~ 713695 (-)
LOC120573248 NA coding downstream 326521 570527 ~ 575826 (-)
il15l NA coding downstream 441003 409173 ~ 461344 (-)
LOC120570742 NA coding upstream 60917 1013220 ~ 1353897 (-)
LOC120572169 NA coding upstream 145034 1097337 ~ 1128067 (-)
LOC120544494 NA coding upstream 197483 1149786 ~ 1154041 (-)
LOC120544505 NA coding upstream 254369 1206672 ~ 1220544 (-)
LOC120544512 NA coding upstream 413328 1365631 ~ 1368320 (-)
G13576 NA non-coding downstream 20335 877227 ~ 882012 (-)
G13235 NA non-coding downstream 136358 765748 ~ 765989 (-)
G13233 NA non-coding downstream 142009 760079 ~ 760338 (-)
G13232 NA non-coding downstream 142629 758973 ~ 759718 (-)
G13230 NA non-coding downstream 167984 733968 ~ 734363 (-)
LOC120571774 NA non-coding upstream 37548 989851 ~ 991035 (-)
G13621 NA non-coding upstream 73735 1026038 ~ 1026411 (-)
G13664 NA non-coding upstream 309731 1262034 ~ 1298976 (-)
G13654 NA non-coding upstream 377396 1329699 ~ 1480649 (-)
G13688 NA non-coding upstream 461006 1413309 ~ 1464806 (-)
si:ch211-137a8.2 NA other downstream 151844 740452 ~ 750503 (-)
G13228 NA other downstream 165805 733268 ~ 736542 (-)
G13195 triap1 other downstream 514963 386401 ~ 387384 (-)
supt5h supt5h other downstream 518159 310607 ~ 384188 (-)
G13128 NA other downstream 577148 309150 ~ 325199 (-)
LOC120571545 NA other upstream 17345 969648 ~ 977738 (-)
G13587 NA other upstream 175588 1127891 ~ 1197686 (-)
LOC120571038 NA other upstream 214295 1166598 ~ 1197743 (-)
G13651 NA other upstream 350593 1302896 ~ 1381721 (-)
G13995 iws1 other upstream 2028758 2981061 ~ 2984498 (-)

Expression


Co-expression Network