LOC120571336


Basic Information

Item Value
gene id LOC120571336
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 2569953 ~ 2702680 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820226.1
GTCTCGTTGTTTCACTGTGATCTCGGGCTGGCGGCGGGATAGTTGTGTTCTTTATTAGTGAGTtttaaacatagacagtataagaACGGTTTTAAGAAGACAGAGCTCCAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagacaagcagcagactgggactctgataccagccatgttcagGAGCTCTCAGCAGATGTCAAGCTGGCGACCGGAGCAGGAGAGAAGGgcaagaaggaggaggaggagcagcctgcagcacctcctgcagcagcagtgaaggaggaagaggaggagcagcctgcagcagcagcagcagtgaaggaggaggaggaggaggagcagcctgcagcagcagcagtgaaggaggaggaagaggaggagtatGTGGTGGAGAAAGTTTTGGACCGCGGAGTGGTGAACGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGGACGTCGACCTTATCACCgagtacatgcagaaacacaaggagaaggagaagaagggcaagaggaaagttgtcagtgaggcctcgggagactcagaggagcgagggagcaagaggaagaaggaggaggtgagCGAAGGAAAGAGGTTACTCCAGACTGAAGAGTTCCACAAATCTAATCTCAATATTAATGAATATTAATACAGCGCAAGAAAGGGAGGAATTTGAGTgattcattaaaaatgtaataataactaggg
>XM_039820235.1
CTCGTTGTTTCACTGTGATCTCGGGCTGGCGGCGGGATAGTTGTGTTCTTTATTAGTGAGTtttaaacatagacagtataagaACGGTTTTAAGAAGACAGAGCTCCAGGTAAACcagcacacactcactcagAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagacaagcagcagactgggactctgataccagccatgttcagGAGCTCTCAGCAGATGTCAAGCTGGCGACCGGAGCAGGAGAGAAGGgcaagaaggaggaggaggagcagcctgcagcacctcctgcagcagcagtgaaggaggaagaggaggagcagcctgcagcagcagcagcagtgaaggaggaggaggaggaggagcagcctgcagcagcagcagtgaaggaggaggaagaggaggagtatGTGGTGGAGAAAGTTTTGGACCGCGGAGTGGTGAACGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGGACGTCGACCTTATCACCgagtacatgcagaaacacaaggagaaggagaagaagggcaagaggaaagttgtcagtgaggcctcgggagactcagaggagcgagggagcaagaggaagaaggaggaggtgagCGAAGGAAAGAGGTTACTCCAGACTGAAGAGTTCCACAAATCTAATCTCAATATTAATGAATATTAATACAGCGCAAGAAAGGGAGGAATTTGAGTgattcattaaaaatgtaataataactagggctgtc
>XM_039820245.1
CGTGCAGCTCGGTGAATGAGACAGCAACTCCTCTtggagagagcagaggagctCCGATTTCTCCTGTTGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagacaagcagcagactgggactctgataccagccatgttcagGAGCTCTCAGCAGATGTCAAGCTGGCGACCGGAGCAGGAGAGAAGGgcaagaaggaggaggaggagcagcctgcagcacctcctgcagcagcagtgaaggaggaagaggaggagcagcctgcagcagcagcagcagtgaaggaggaggaggaggaggagcagcctgcagcagcagcagtgaaggaggaggaagaggaggagtatGTGGTGGAGAAAGTTTTGGACCGCGGAGTGGTGAACGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGGACGTCGACCTTATCACCgagtacatgcagaaacacaaggagaaggagaagaagggcaagaggaaagttgtcagtgaggcctcgggagactcagaggagcgagggagcaagaggaagaaggaggaggtgagCGAAGGAAAGAGGTTACTCCAGACTGAAGAGTTCCACAAATCTAATCTCAATATTAATGAATATTAATACAGCGCAAGAAAGGGAGGAATTTGAGTgattcattaaaaatgtaataataactagggctgtca
>XM_039820252.1
ctacagggacagagagaggaacagcCAGAGGGACAGCAAGTGGATCCATGTGGATCAAGTACTGCACCATCAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagacaagcagcagactgggactctgataccagccatgttcagGAGCTCTCAGCAGATGTCAAGCTGGCGACCGGAGCAGGAGAGAAGGgcaagaaggaggaggaggagcagcctgcagcacctcctgcagcagcagtgaaggaggaagaggaggagcagcctgcagcagcagcagcagtgaaggaggaggaggaggaggagcagcctgcagcagcagcagtgaaggaggaggaagaggaggagtatGTGGTGGAGAAAGTTTTGGACCGCGGAGTGGTGAACGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGGACGTCGACCTTATCACCgagtacatgcagaaacacaaggagaaggagaagaagggcaagaggaaagttgtcagtgaggcctcgggagactcagaggagcgagggagcaagaggaagaaggaggaggtgagCGAAGGAAAGAGGTTACTCCAGACTGAAGAGTTCCACAAATCTAATCTCAATATTAATGAATATTAATACAGCGCAAGAAAGGGAGGAATTTGAGTgattcattaaaaatgtaataataactagggctgtca

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820226.1 False 836 mRNA 0.51 4 2692570 2702674
XM_039820235.1 True 863 mRNA 0.51 4 2692572 2702679
XM_039820245.1 False 800 mRNA 0.53 4 2569953 2702680
XM_039820252.1 False 804 mRNA 0.52 4 2636525 2702680

Neighbor

gene id symbol gene type direction distance location
LOC120570773 NA coding upstream 6774 2551061 ~ 2563179 (+)
LOC120544544 NA coding upstream 74743 2486924 ~ 2495210 (+)
LOC120570706 ltbp4 coding upstream 135619 2386670 ~ 2434334 (+)
LOC120544531 NA coding upstream 318660 2245619 ~ 2251293 (+)
LOC120571219 NA coding upstream 345983 2208981 ~ 2223970 (+)
LOC120571608 NA coding downstream 3182 2705862 ~ 2707320 (+)
LOC120571388 NA coding downstream 8996 2711676 ~ 2785208 (+)
LOC120571598 NA coding downstream 29657 2732337 ~ 2733568 (+)
LOC120544561 NA coding downstream 39673 2742353 ~ 2759931 (+)
LOC120544717 NA coding downstream 95306 2797986 ~ 2799327 (+)
G13518 NA non-coding upstream 105075 2461744 ~ 2464878 (+)
G13516 NA non-coding upstream 179464 2390149 ~ 2390489 (+)
LOC120571707 NA non-coding upstream 324492 2224837 ~ 2245461 (+)
G13497 NA non-coding upstream 448875 2120746 ~ 2121078 (+)
G13476 NA non-coding upstream 572447 1997021 ~ 1997506 (+)
LOC120571804 NA non-coding downstream 119480 2822160 ~ 2822855 (+)
G13920 NA non-coding downstream 141375 2844055 ~ 2846365 (+)
G13921 NA non-coding downstream 144123 2846803 ~ 2847056 (+)
G13929 NA non-coding downstream 176713 2879393 ~ 2879852 (+)
G13930 NA non-coding downstream 180135 2882815 ~ 2883942 (+)
LOC120571187 NA other upstream 275065 2263410 ~ 2294888 (+)
G13390 NA other upstream 1010290 1551864 ~ 1559663 (+)
G13262 NA other upstream 1288360 896198 ~ 1281593 (+)
G13286 NA other upstream 1570974 997866 ~ 998979 (+)
G13234 NA other upstream 1803976 765539 ~ 765977 (+)
G13555 NA other downstream 23639 2726319 ~ 2738188 (+)
zgc:162872 LOC103361195,LOC100694875,LOC101467947,LOC102198539,LOC102776046 other downstream 245954 2948634 ~ 2964772 (+)
LOC120544739 NA other downstream 275171 2977851 ~ 2996315 (+)
G14148 NA other downstream 1316564 4019244 ~ 4055085 (+)
LOC120571647 LOC103360213,LOC102310147 other downstream 1534891 4237571 ~ 4852575 (+)

Expression


Co-expression Network