LOC120571354


Basic Information

Item Value
gene id LOC120571354
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 1715997 ~ 1807566 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820261.1
CACTAGCCTAGAGCATTCAGTGGGTGACTTGACCCATTAGTCTCCAGTGGTAACGTCAGTGTAACTCACCGCAGATATAACTTTATTAGATAGCACTATGCAGCTGTCTGTACAGATGTCGGACTTCTTCAGGCTCCAACACTGAAAGCGTTGAAAGAACATCAGGAGGACGCTGGTAGCAAATgctaacctagctagctacactgttaGCATCTCAGCAGCTGTTCCGTCCACTTGAAGGCATCATTGAGTCCTACGATAGTCTAACGTTAAACAGACTAACGTTACATACAGTCTACGATACTACAGATATCAACTAACGTTAATAGTTATTTAGCGTGCAGCGTGTGGTGGTGCTCGGTGAATGAGACAGCAACTCCTCTtggagagagcagaggagctCCGAGTTCTCCTGTTGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagacaagcagcagactgggactctgataccagccatgttcagAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGACAAGAGAAGAATGGAGGAGgacaaccagaaccaggagcagcggagcaacaaggtccccagaagaccagcagcagactgggactctgataccagccatgttcagGCGCCCTCAGCAGACGTCAAGCTGGCGACCGGAGCAGGAAAGAAGGGCAAGAAGGccaaggaggaggagcagcctgcagctcctcctgcagctgcagaaacggcagcagtgaaggaggaggaagagaaggagtaTGTGGTGGAGAAAATGTTGGACCGCAGAGTGGTGAACGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGGACGTTGACCTTATCACCgagtacatgcagaaacacaaggagaaggaggagaagaagaaggagaagaagaagggcaagaggaaagttgtcagtgaggcctcgggagactcagaggagcgagggagcaagaggaaggaggaagaggtgAGCGAAGGAAAGAGGTTACTCCAGACTGAAGAGTCCCATAAATCTAATCTCAATATTAACGAATAATAATATAGTGCAGAAAAGCgaggaatttaaatgatttattaaaactgTAATAATAACTAAGGCTgt
>XM_039820267.1
GTGATCTCGGGCTGGCGGCGGGATAGTTGTGTTGTTTATTAGTGAGTtttaaacatagacagtataagaACGGTTTTAAGAAGACAGAGCTCCAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagacaagcagcagactgggactctgataccagccatgttcagAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGACAAGAGAAGAATGGAGGAGgacaaccagaaccaggagcagcggagcaacaaggtccccagaagaccagcagcagactgggactctgataccagccatgttcagGCGCCCTCAGCAGACGTCAAGCTGGCGACCGGAGCAGGAAAGAAGGGCAAGAAGGccaaggaggaggagcagcctgcagctcctcctgcagctgcagaaacggcagcagtgaaggaggaggaagagaaggagtaTGTGGTGGAGAAAATGTTGGACCGCAGAGTGGTGAACGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGGACGTTGACCTTATCACCgagtacatgcagaaacacaaggagaaggaggagaagaagaaggagaagaagaagggcaagaggaaagttgtcagtgaggcctcgggagactcagaggagcgagggagcaagaggaaggaggaagaggtgAGCGAAGGAAAGAGGTTACTCCAGACTGAAGAGTCCCATAAATCTAATCTCAATATTAACGAATAATAATATAGTGCAGAAAAGCgaggaatttaaatgatttattaaaactgTAATAATAACTAAGGCTgt
>XM_039820274.1
TAGAGCTGCGCACCCAAACACTAGCCTAGAGCATTCAGTGGTTGACTTGACCCATTAGTCTCCAGTGGTAACGTCAGTGTAACTCACCGCAGATATAACTTTATTAGATAGCACTATGCAGCTGCCTGTACAGATGTCGGACTTCTTCAGGCTCCAACACTGAAAGCGTTGGAAGAACATCAGGAGGACGCTGGTAGCAAATgctaacctagctagctacactgttaGCATCTCAGCAGCTGTTCCGTCCACTTGAAGGCATCATTGAGTCCTACGATAGTCTAACGTTAAACAGACTAACGTTACATACAGTCTACGATACCACAGATATCAACTAACGTGAACAGTTATTTAGCGTGCAGCGTGTGGTGGTGCTCGGTGAATGAGACAGCAACTCCTCTTGGAGAGAGCAGAGGCGCTCCGAGTTCTCCTGTTGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGACAAGAGAAGAATGGAGGAGgacaaccagaaccaggagcagcggagcaacaaggtccccagaagaccagcagcagactgggactctgataccagccatgttcagGCGCCCTCAGCAGACGTCAAGCTGGCGACCGGAGCAGGAAAGAAGGGCAAGAAGGccaaggaggaggagcagcctgcagctcctcctgcagctgcagaaacggcagcagtgaaggaggaggaagagaaggagtaTGTGGTGGAGAAAATGTTGGACCGCAGAGTGGTGAACGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGGACGTTGACCTTATCACCgagtacatgcagaaacacaaggagaaggaggagaagaagaaggagaagaagaagggcaagaggaaagttgtcagtgaggcctcgggagactcagaggagcgagggagcaagaggaaggaggaagaggtgAGCGAAGGAAAGAGGTTACTCCAGACTGAAGAGTCCCATAAATCTAATCTCAATATTAACGAATAATAATATAGTGCAGAAAAGCgaggaatttaaatgatttattaaaactgTAATAATAACTAAGGCTgt
>XM_039820283.1
CTGGCGGCGGGATAGTTGTGTTGTTTATTAGTGAGTtttaaacatagacagtataagaACGGTTTTAAGAAGACAGAGCTCCAGGtaaacccgcacacacacactcagAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagacaagcagcagactgggactctgataccagccatgttcagAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGACAAGAGAAGAATGGAGGAGgacaaccagaaccaggagcagcggagcaacaaggtccccagaagaccagcagcagactgggactctgataccagccatgttcagGCGCCCTCAGCAGACGTCAAGCTGGCGACCGGAGCAGGAAAGAAGGGCAAGAAGGccaaggaggaggagcagcctgcagctcctcctgcagctgcagaaacggcagcagtgaaggaggaggaagagaaggagtaTGTGGTGGAGAAAATGTTGGACCGCAGAGTGGTGAACGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGGACGTTGACCTTATCACCgagtacatgcagaaacacaaggagaaggaggagaagaagaaggagaagaagaagggcaagaggaaagttgtcagtgaggcctcgggagactcagaggagcgagggagcaagaggaaggaggaagaggtgAGCGAAGGAAAGAGGTTACTCCAGACTGAAGAGTCCCATAAATCTAATCTCAATATTAACGAATAATAATATAGTGCAGAAAAGCgaggaatttaaatgatttattaaaactgTAATAATAACTAAGGCTgt
>XM_039820293.1
TAGAGCTGCGCACCCAAACACTAGCCTAGAGCATTCAGTGGTTGACTTGACCCATTAGTCTCCAGTGGTAACGTCAGTGTAACTCACCGCAGATATAACTTTATTAGATAGCACTATGCAGCTGCCTGTACAGATGTCGGACTTCTTCAGGCTCCAACACTGAAAGCGTTGGAAGAACATCAGGAGGACGCTGGTAGCAAATgctaacctagctagctacactgttaGCATCTCAGCAGCTGTTCCGTCCACTTGAAGGCATCATTGAGTCCTACGATAGTCTAACGTTAAACAGACTAACGTTACATACAGTCTACGATACCACAGATATCAACTAACGTGAACAGTTATTTAGCGTGCAGCGTGTGGTGGTGCTCGGTGAATGAGACAGCAACTCCTCTTGGAGAGAGCAGAGGCGCTCCGAGTTCTCCTGTTGGCGCCCTCAGCAGACGTCAAGCTGGCGACCGGAGCAGGAAAGAAGGGCAAGAAGGccaaggaggaggagcagcctgcagctcctcctgcagctgcagaaacggcagcagtgaaggaggaggaagagaaggagtaTGTGGTGGAGAAAATGTTGGACCGCAGAGTGGTGAACGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGGACGTTGACCTTATCACCgagtacatgcagaaacacaaggagaaggaggagaagaagaaggagaagaagaagggcaagaggaaagttgtcagtgaggcctcgggagactcagaggagcgagggagcaagaggaaggaggaagaggtgAGCGAAGGAAAGAGGTTACTCCAGACTGAAGAGTCCCATAAATCTAATCTCAATATTAACGAATAATAATATAGTGCAGAAAAGCgaggaatttaaatgatttattaaaactgTAATAATAACTAAGGCTgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820261.1 True 1249 mRNA 0.49 5 1715997 1807566
XM_039820267.1 False 926 mRNA 0.50 5 1715997 1745596
XM_039820274.1 False 1114 mRNA 0.49 4 1715997 1729363
XM_039820283.1 False 939 mRNA 0.50 5 1715997 1745585
XM_039820293.1 False 961 mRNA 0.48 3 1715997 1729363

Neighbor

gene id symbol gene type direction distance location
LOC120544663 NA coding downstream 37283 1674330 ~ 1678714 (-)
LOC120570757 NA coding downstream 50529 1639505 ~ 1665468 (-)
LOC120544633 NA coding downstream 101755 1596198 ~ 1614242 (-)
LOC120544624 NA coding downstream 130002 1502247 ~ 1585995 (-)
LOC120571637 NA coding downstream 134968 1533279 ~ 1581029 (-)
LOC120544522 NA coding upstream 9014 1816580 ~ 1818524 (-)
LOC120570781 NA coding upstream 43547 1851113 ~ 1876999 (-)
LOC120571537 NA coding upstream 72542 1880108 ~ 1884734 (-)
LOC120571592 NA coding upstream 105139 1912705 ~ 1914419 (-)
LOC120544676 NA coding upstream 121911 1929477 ~ 1943027 (-)
G13723 NA non-coding downstream 10985 1704488 ~ 1705012 (-)
LOC120571736 NA non-coding downstream 21313 1684982 ~ 1694684 (-)
G13719 NA non-coding downstream 26965 1688784 ~ 1689032 (-)
G13654 NA non-coding downstream 235348 1329699 ~ 1480649 (-)
G13688 NA non-coding downstream 251191 1413309 ~ 1464806 (-)
G13656 NA non-coding upstream 10496 1818062 ~ 1821409 (-)
G13738 NA non-coding upstream 13910 1821476 ~ 1826950 (-)
G13743 NA non-coding upstream 45666 1853232 ~ 1855176 (-)
LOC120571691 NA non-coding upstream 179413 1986979 ~ 1987408 (-)
G13775 NA non-coding upstream 248950 2056516 ~ 2056848 (-)
G13651 NA other downstream 334276 1302896 ~ 1381721 (-)
LOC120571038 NA other downstream 518254 1166598 ~ 1197743 (-)
G13587 NA other downstream 518311 1127891 ~ 1197686 (-)
LOC120571545 NA other downstream 738259 969648 ~ 977738 (-)
si:ch211-137a8.2 NA other downstream 965494 740452 ~ 750503 (-)
G13995 iws1 other upstream 1173495 2981061 ~ 2984498 (-)
LOC120570817 NA other upstream 1249163 3056729 ~ 3228824 (-)
G14426 il1rap,LOC106536183,LOC107379882,LOC108229411,LOC106536182 other upstream 1665371 3472937 ~ 3722632 (-)
LOC120544895 LOC102787186 other upstream 2091887 3899453 ~ 4015956 (-)
LOC120571085 mb21d2 other upstream 2221174 4028740 ~ 4055084 (-)

Expression


Co-expression Network