LOC120571388


Basic Information

Item Value
gene id LOC120571388
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 2711676 ~ 2785208 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820318.1
TATCGTTGCTTCACTGTGATCTCGTGCTGGCGGCGGGATAGTTGTGTTGTTTATTAGTGAGTtttaaacatagacagtataagaACGGTTTTAAGAAGACAGAGCTCCAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagaccagcagcagactgggactctgataCCAGCCATGTTCAGGAGCCCTCAGCAGACGTCAAGCTGGCGACCGTAGCAGGAAAGAAGGCcgaggaggagcagcctgcagcacctcctgcagcagtgaaggaggaggaggaggagcagccagCAACAatagcagaagcagcagcagcagtgaagggggaagaggaggagtatGTGGTGGAGAAAGTTTTGGACCGCAGAGTGGTGAACGGAAGAGCagagtttctgctgaaatggaaggggttctcaaaTGAGGATATCACATGGGAGCCGCAAGACAACCTGGATGTCGACCTTATCACCgagtacatgcagaaacacaacgagaaggaggaggagaagaagggcAAGAGGAAAGTTGTCACCGAGGCCTCGGGAGACTCAGAGGAGCgagggagcaagaggaagaaggaggagAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagaccagcagcagactgggactctAATACCAGCCATGTTCAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagacaagcagcagactgggactctgataccagccatgttcagGAGCCCTCAGCAGACGTCAAGCTGGCGACCGGCGCAGGAAAGGACAAGAAGGCCAAGGAGGAGGAGCATCCTGCAGTACCTCCTGCAGCattgaaggaggaagaggaggaggagcagcctgcagcacctcctgcagctgctgcagcagtgaaggaggaagCGGACGAGGAGCAacctgcagcacctcctgcagCTGCATCATCAGCAGTGAAAGAGGAGGAGCAACCTGtagcagcagtgaaggaggaggaggaggaggaggagcatcctgcagcagcagtgaagaagga
>XM_039820326.1
TATCGTTGCTTCACTGTGATCTCGTGCTGGCGGCGGGATAGTTGTGTTGTTTATTAGTGAGTtttaaacatagacagtataagaACGGTTTTAAGAAGACAGAGCTCCAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagaccagcagcagactgggactctgataCCAGCCATGTTCAGGAGCCCTCAGCAGACGTCAAGCTGGCGACCGTAGCAGGAAAGAAGGCcgaggaggagcagcctgcagcacctcctgcagcagtgaaggaggaggaggaggagcagccagCAACAatagcagaagcagcagcagcagtgaagggggaagaggaggagtatGTGGTGGAGAAAGTTTTGGACCGCAGAGTGGTGAACGGAAGAGCagagtttctgctgaaatggaaggggttctcaaaTGAGGATATCACATGGGAGCCGCAAGACAACCTGGATGTCGACCTTATCACCgagtacatgcagaaacacaacgagaaggaggaggagaagaagggcAAGAGGAAAGTTGTCACCGAGGCCTCGGGAGACTCAGAGGAGCgagggagcaagaggaagaaggaggagAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagaccagcagcagactgggactctAATACCAGCCATGTTCAGaaacggagaggaggagagggacccaaacgtcaccactgtcaacactgt

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820318.1 True 1261 mRNA 0.55 7 2711676 2785208
XM_039820326.1 False 866 mRNA 0.54 6 2711676 2758249

Neighbor

gene id symbol gene type direction distance location
LOC120571608 NA coding upstream 4356 2705862 ~ 2707320 (+)
LOC120571336 NA coding upstream 8996 2569953 ~ 2702680 (+)
LOC120571227 NA coding upstream 38788 2658867 ~ 2672888 (+)
LOC120544551 NA coding upstream 79347 2625373 ~ 2632329 (+)
LOC120570971 NA coding upstream 117239 2566635 ~ 2594437 (+)
LOC120544717 NA coding downstream 12778 2797986 ~ 2799327 (+)
LOC120544728 NA coding downstream 20703 2805911 ~ 2817561 (+)
LOC120570832 NA coding downstream 68010 2853218 ~ 2872402 (+)
LOC120570793 NA coding downstream 103817 2889025 ~ 2934705 (+)
LOC120571294 NA coding downstream 149569 2934777 ~ 2940723 (+)
G13531 NA non-coding upstream 40073 2561855 ~ 2671603 (+)
G13518 NA non-coding upstream 246798 2461744 ~ 2464878 (+)
G13516 NA non-coding upstream 321187 2390149 ~ 2390489 (+)
LOC120571707 NA non-coding upstream 466215 2224837 ~ 2245461 (+)
G13497 NA non-coding upstream 590598 2120746 ~ 2121078 (+)
LOC120571804 NA non-coding downstream 36952 2822160 ~ 2822855 (+)
G13920 NA non-coding downstream 58847 2844055 ~ 2846365 (+)
G13921 NA non-coding downstream 61595 2846803 ~ 2847056 (+)
G13929 NA non-coding downstream 94185 2879393 ~ 2879852 (+)
G13930 NA non-coding downstream 97607 2882815 ~ 2883942 (+)
LOC120571187 NA other upstream 416788 2263410 ~ 2294888 (+)
G13390 NA other upstream 1152013 1551864 ~ 1559663 (+)
G13262 NA other upstream 1430083 896198 ~ 1281593 (+)
G13286 NA other upstream 1712697 997866 ~ 998979 (+)
G13234 NA other upstream 1945699 765539 ~ 765977 (+)
zgc:162872 LOC103361195,LOC100694875,LOC101467947,LOC102198539,LOC102776046 other downstream 163426 2948634 ~ 2964772 (+)
LOC120544739 NA other downstream 192643 2977851 ~ 2996315 (+)
G14148 NA other downstream 1234036 4019244 ~ 4055085 (+)
LOC120571647 LOC103360213,LOC102310147 other downstream 1452363 4237571 ~ 4852575 (+)
LOC120570718 LOC103473932 other downstream 1578458 4363666 ~ 4449830 (+)

Expression


Co-expression Network