LOC120571626


Basic Information

Item Value
gene id LOC120571626
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4949179 ~ 4975582 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820686.1
tttaaGAGTTAGTGTCGCAGCTTTTTCTCTCCATGTGGAGCTCCAGCTGAAGGACCCATTAGAGACCAGACtctgctgaacctgaacctgaatccagctgtgtgtccatgaagagtcACCGGTCCATGGAGCCACCACTACTTTAAGAAAAGAACTGTAAGGGAGAGGAGAATagaaatggaggagagaggatTGATGGAGAGACTTGAATGGCAGAAGGAGAGAATAACAATGGAAAGGGAAATTGAAATGTTAAGAAGAAGATTGAGgacccagcagagaccagagtcccctgaacctgaacctgaacctgaatctgaacctgaacctgaacctgaacccagctgtgtgtctatTAAGAGTGACAGGTCAAATCAACGCTATATTGACTTTAAAGGAAAGCAACCATCTGCTGAAAGGACagtggaccaggagagctcagaggtttccagtggtcagtctgcccagcagcatcaaacacacctggactccatatttatgctgctggaggagaacattggcacttttgtgaagaacgagctgaagaagatccagaagcttctgagtccagattacccagaaAGCTTAGAAAGTAAGAGGAAGAGTGAGGAAGAAGAGCAcaggagcagcagagaggcatttctgaagatcacactgcacttcctcAAGAGAATGAAGCAGGACGAGCTGGCTGACCGTCTGCAGCGCAGAAGTTCTGCTGGAGTTTGTAAATGTAAACTCAAATCTAACCTAAACaagaagttccagtgtgtgtttgaggggattgctaaagcaggaaacccaacccttctgaatcagatgttcacagagatctacatcatggagagagggactgcagaggtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccagacagaccagaaacaacaatcagacgagaagacatctttaaagccccacctggaagagatgaaccaatcagaacagtgatgactaaaggagtggctggcatcgggaaaacagtcttaacacagaagttcactctggactgggctgaaggcaAAGCCAACCAAGACATCCAGTTCATATTTCCATTCACTTTCAGAGAGCTGAACGTGCTGAAAGAAAAAAggtacagcttggtggaacttgttgattACTTCTTCAGTGgaaccaaagaagcaggaatctgcaggtttgaagagttccaGGTTGTGTTCATAtttgacggtctggatgagtgtcgactttctctggacttccacaacactgagatcctgactgatgttacagagtccacctcagtaGGTGcgctgctgacaaacctcatcagggggaatctgcttccctctgctcggatctggataaccacacgacctgcagcagctaATCAGATCCCTGctgagtgtgttgacatggtgacagaggtcagaggatTCATTGACcaacagaaggaggagtacttcagtaAGAGATACACAGATAAGGAGcaggccagcagaatcatctcccacatcaagacatcacgaagcctccacatcatgtgccacatccctgtcttctgctggatcactgctacagttctggaggacgtgttgaagaccagagagggaggagagctgcccaagaccctgactgagatgtacatccacttcctggtggttcagtccaaagtgaAGAACATCAAGTATGATGGAAAATCTGAGACGGATCATCACTGGAGTCCAGAGACCAGGAAGATGATTGAGTatctgggaaaactggcttttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagctcagcctcagtgtactctggagtgttcacacagatctttaaagaggagagaggactgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctggctgctcttcatgtccatctgacattcatCAACTCTGGAGTCAGCCTGCTGTCAGAAGAACAATCAACATCTTGGTGGGCTGAAATGTTCAGAGACAAATCAACATGtttctaccagagtgctgtggacaaggccttacagagtccaaatggacacctggacttgttcctccgcttcctcctgggtctttcactgcagaccaatcagaatctcCTACGAGGCCTgatgacacagacaggaagtagctcaGAGAACAATCAGAAAACAGTTGAGTACATCAAGacgaagttcagtgaggatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaatgatggtTCTCTAGTGGAGCAGCTCCAACAATACAtgagttcaggaagtctctccaaaggtaaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaaaacagtctggacgtgtttgacctgaagaaatactctgcatcagaggaggctcttctcaggttgctgccagtggtcaaagcctccaacaaagctctactgagtggctgtaaacTGTcaaagagaagctgtgaagctctgtcctcagttctcagctcccagtccactagtctgagagagctggacctgagtaacaatgacctgcaggattcaggagggaagctgatgtctgttggactgaagagtccacactgcacactggagactctcagactgaaTGGCTGTAAACtatcagagagaagctgtgaagatctgtcctcagttctcagctcccagtcctctagtctgaaagagctggacctgagtaacaacgaactgcaggattcaggagtgaagctgatctctgttggactgaagagtccacactgcacactggagacgCTCAGggtggagcctgctggagtcagataTTTGACACCAGGTCCATGGAGAtattcctgtgaactcacactggacacaaacacagtgagcagaaaactcaaactgtctgacaacaacaggaaggtgacacgtGTGAAGGAGGATCagtcatatcctgatcatccagagaggtttgactcctACTAtcatcagctgctgtgtagagatggtctgactggtcgctgttactgggaggttcaGATGAGAGGAGATGTtgatatatcagtgagttacagaggaatcagcaggagaggagacggtgctgactgtgtgtttggatggaatgatcagtcctggagtctggaCTGCTCTGATGGTCGTTACACTGTCTGGCACAATAACAGAGaaacatccatctcctcctcctctgtctctggtagagtagcagacatctcctcctcctctgtctctggtagagtagcagacatctcctcctcctctgtctctgatagagtagcagtgtatgtggactgtcctgctggctctctgtccttctactcagtctcctctgactcactgatccacctccacaccttcaacaccacattcactcagcctgtCTATCCTGGGTTCTGGCTCGGttctggttcctcagtgtctctgagtcCAGTGTAGGAcggagagtctcctcctgtttctcactgctgatcagttgagtctgtacCGCCGGGGTCGTCAACTACAATTTTTTCAAGGGCCAGAATGTTTCTAAGCAGACGCTGTGGGGgacggactttcaaataaataaaataaaatgaattcataCCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820686.1 True 3659 mRNA 0.48 10 4949179 4975582

Neighbor

gene id symbol gene type direction distance location
LOC120544909 NA coding downstream 810626 4088176 ~ 4138553 (-)
LOC120544902 LOC103361205,LOC106936657,LOC106910224,LOC103150884,LOC103475299 coding downstream 871051 4052192 ~ 4078128 (-)
LOC120571031 NA coding downstream 1025323 3921782 ~ 3923856 (-)
LOC120571265 fgf12,fgf12b,LOC104939444,LOC102791340,LOC102235588,LOC107670129 coding downstream 1157497 3739762 ~ 3791682 (-)
LOC120570954 NA coding downstream 1226508 3662000 ~ 3722671 (-)
LOC120544953 NA coding upstream 277412 5252994 ~ 5267295 (-)
LOC120570786 NA coding upstream 326223 5301805 ~ 5326758 (-)
LOC120548458 NA coding upstream 490368 5465950 ~ 5472587 (-)
LOC120544977 NA coding upstream 501398 5476980 ~ 5484148 (-)
LOC120553850 LOC102792301,LOC101471225,LOC102195026,LOC103361203,LOC106536115 coding upstream 540077 5515659 ~ 5535486 (-)
G14662 NA non-coding downstream 10017 4938840 ~ 4939162 (-)
G14577 NA non-coding downstream 34430 4865312 ~ 4914749 (-)
LOC120571684 samd3,LOC101476819 non-coding downstream 46511 4901444 ~ 4902668 (-)
G14649 NA non-coding downstream 55126 4811476 ~ 4894053 (-)
G14576 NA non-coding downstream 76493 4871269 ~ 4872686 (-)
G14665 NA non-coding upstream 12419 4988001 ~ 5035088 (-)
G14666 NA non-coding upstream 12985 4988567 ~ 5062623 (-)
G14667 NA non-coding upstream 14077 4989659 ~ 5042289 (-)
G14566 NA non-coding upstream 16934 4992516 ~ 4993232 (-)
G14668 NA non-coding upstream 29379 5004961 ~ 5005835 (-)
LOC120571085 mb21d2 other downstream 894095 4028740 ~ 4055084 (-)
LOC120544895 LOC102787186 other downstream 933223 3899453 ~ 4015956 (-)
G14426 il1rap,LOC106536183,LOC107379882,LOC108229411,LOC106536182 other downstream 1226547 3472937 ~ 3722632 (-)
LOC120570817 NA other downstream 1720355 3056729 ~ 3228824 (-)
G13995 iws1 other downstream 1964681 2981061 ~ 2984498 (-)
G14579 NA other upstream 87406 5062988 ~ 5111979 (-)
G14553 LOC108250350,LOC108250351,LOC108241855,LOC108249964,LOC107380983,LOC108242154,LOC108242155 other upstream 183748 5159330 ~ 5350376 (-)
LOC120554300 cldn1,LOC103361214 other upstream 513674 5489256 ~ 5510035 (-)
G14722 NA other upstream 534939 5510521 ~ 5533827 (-)
col4a4 LOC104946957 other upstream 579892 5555474 ~ 5639200 (-)

Expression


Co-expression Network