LOC120572189 (LOC103357875,LOC102300835,LOC102196867,LOC101475975)


Basic Information

Item Value
gene id LOC120572189
gene name LOC103357875,LOC102300835,LOC102196867,LOC101475975
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 26135814 ~ 26156545 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821375.1
GTGAAGTAGACTCATAGTAGATGTCCGTGCTACTCAGAACTCACAAAGCTTTGAGAGGGTTGCAAGCCTGAACTGAAACCTGAACTGGACTCGGACTTGAGAGTGGATCTATCATGACTGCAAGGATCCAGGGAGCGCCGGGCCGGGACAAACCAGCCCCAAAGAGCCGAGCAACAGACATGATGGTGAGGGTCAGGAGAGCTCTGTGGCTGGTACTGGGCATGCTCAGTCTATCCCTGCTGCTGGTGGTGCTGGGAGTCTACACAACCACCCGAACAGAGAGCCTGAATGTGACTGGCTACATCTCTGGAGTTATTATGACCCTTGGATCATTCCTGGGACTTCTGGGACTGCATCTGGAAGAAAACCGCAAAAAGCTGCTGACGGCTGCGATTGTATTCCTTAGCTTCGGGATCGTCACctcttttgtgtgtttggtgATTGATGGCGTCTGTATTGTCTTAAACATGGACATGCGTCCAATGAAAGCAGAGAGATGCCAGTATtacagcagcggcagcagctaCGTCTATGAGAATTTCTACACCTCTgtGTCGTGTTGGAGTCCAAAGGAGTCTTGTAATATTACGGTACGAAGTGGGACCTGCTACTGCTGCGACCTGTACGACTGCGCCAATGGAGGCTACCTCAGCAACTACTACGAGTATGTTGGAGTACAAAGCTGTGAGGAAGTTTTCACTCTGTACATTTTAATTTGGAACCTCACTGGCCTGAACCTCGTGGCCTTCTTCACAGGCATCCTTACGACAGCCGTGCTGGACAGCATCAAGGACCTGaggaGTAGCGGCCCTGTGACCGAGCCCTCTGAGAGCACAGCATCTTCCCCGACAGCTCCTCTGCTGATGGACGTCGCCAACACACACGCAGTTCACCAGCTCCACCCAGTCAGTGGAGCCTCCATGTATTTCCCTCCAGCAGAAGGGACGGCCGCCTCGCAGAGTTCTCATCCTTCATCGACTCCTCACACTGAGTCGAATCCTCCTCCCTTCGCCCCGCTGACCAGCCTGCTGCCTTACAGGGCCCACAGCAGCTCTGCATgagcacagcagcagcagcaaagagCAGCattttaccagaaaatgaccagaaaacaaaagcagaaaGAACAGAAAGGGATAAACAGAtcggtttaaatttttttgttgatgttgtgaGGATGAGAGGAACTATAACAGGCACAACTAAAAGAAAGATATGTTGCTCTGAATATTATGCAGAAATGCAGATTTTGTTTTATAGAAATCCAAAGGCGGATGTTTCAATTGTATGCAAAGATTATAacatattttactgtattttgctcaaaaacataaacatctgaagttgtaaaatgtatttacatgaAATGTTATCTGTTATAAATGTGTCGACTGCATGCACATGCTGTCTAGGCTATAGCACAAACTTTaactttcacaaacagtgaaatCATACACAATAGTTAAAACCTTATTTGAACATAAATGAAATGTATCATTTATAATATTGATAGCATGGTGTTCTCACACAACCAAACGTAGTACAACACACAAGGTTTTGTAATAAATattaggtttgtgtgtgttgaagtTTGATTTATGCCCTATAAGGCCTCTCAAACGCATGATTTAAATACAAACATGTAATGTTTATTTTACTAACTGTTGTCCTGTAGAGTACATTTTGCTTCACTTCATGTCAAACTTTTTATAATGTGTCTGATTaaacaatcatttaaaaaaggtttttttatggcaatggtttttt
>XM_039821385.1
GTGAAGTAGACTCATAGTAGATGTCCGTGCTACTCAGAACTCACAAAGCTTTGAGAGGGTTGCAAGCCTGAACTGAAACCTGAACTGGACTCGGACTTGAGAGTGGATCTATCATGACTGCAAGGATCCAGGGAGCGCCGGGCCGGGACAAACCAGCCCCAAAGAGCCGAGCAACAGACATGATGGTGAGGGTCAGGAGAGCTCTGTGGCTGGTACTGGGCATGCTCAGTCTATCCCTGCTGCTGGTGGTGCTGGGAGTCTACACAACCACCCGAACAGAGAGCCTGAATGTGACTGGCTACATCTCTGGAGTTATTATGACCCTTGGATCATTCCTGGGACTTCTGGGACTGCATCTGGAAGAAAACCGCAAAAAGCTGCTGACGGCTGCGATTGTATTCCTTAGCTTCGGGATCGTCACctcttttgtgtgtttggtgATTGATGGCGTCTGTATTGTCTTAAACATGGACATGCGTCCAATGAAAGCAGAGAGATGCCAGTATtacagcagcggcagcagctaCGTCTATGAGAATTTCTACACCTCTgtGTCGTGTTGGAGTCCAAAGGAGTCTTGTAATATTACGGTACGAAGTGGGACCTGCTACTGCTGCGACCTGTACGACTGCGCCAATGGAGGCTACCTCAGCAACTACTACGAGTATGTTGGAGTACAAAGCTGTGAGGAAGTTTTCACTCTGTACATTTTAATTTGGAACCTCACTGGCCTGAACCTCGTGGCCTTCTTCACAGGCATCCTTACGACAGCCGTGCTGGACAGCATCAAGGACCTGaggaGTAGCGGCCCTGTGACCGAGCCCTCTGAGAGCACAGCATCTTCCCCGACAGCTCCTCTGCTGATGGACGTCGCCAACACACACGCAGTTCACCAGCTCCACCCAGGAGCCTCCATGTATTTCCCTCCAGCAGAAGGGACGGCCGCCTCGCAGAGTTCTCATCCTTCATCGACTCCTCACACTGAGTCGAATCCTCCTCCCTTCGCCCCGCTGACCAGCCTGCTGCCTTACAGGGCCCACAGCAGCTCTGCATgagcacagcagcagcagcaaagagCAGCattttaccagaaaatgaccagaaaacaaaagcagaaaGAACAGAAAGGGATAAACAGAtcggtttaaatttttttgttgatgttgtgaGGATGAGAGGAACTATAACAGGCACAACTAAAAGAAAGATATGTTGCTCTGAATATTATGCAGAAATGCAGATTTTGTTTTATAGAAATCCAAAGGCGGATGTTTCAATTGTATGCAAAGATTATAacatattttactgtattttgctcaaaaacataaacatctgaagttgtaaaatgtatttacatgaAATGTTATCTGTTATAAATGTGTCGACTGCATGCACATGCTGTCTAGGCTATAGCACAAACTTTaactttcacaaacagtgaaatCATACACAATAGTTAAAACCTTATTTGAACATAAATGAAATGTATCATTTATAATATTGATAGCATGGTGTTCTCACACAACCAAACGTAGTACAACACACAAGGTTTTGTAATAAATattaggtttgtgtgtgttgaagtTTGATTTATGCCCTATAAGGCCTCTCAAACGCATGATTTAAATACAAACATGTAATGTTTATTTTACTAACTGTTGTCCTGTAGAGTACATTTTGCTTCACTTCATGTCAAACTTTTTATAATGTGTCTGATTaaacaatcatttaaaaaaggtttttttatggcaatggtttttt

Function

NR:

description
PREDICTED: transmembrane protein 255B-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821375.1 True 1767 mRNA 0.44 9 26135814 26156545
XM_039821385.1 False 1761 mRNA 0.44 9 26135814 26156545

Neighbor

gene id symbol gene type direction distance location
dner dner coding downstream 97256 25986594 ~ 26038558 (-)
pid1 pid1,LOC102785909 coding downstream 153599 25950551 ~ 25982215 (-)
LOC120546637 sphkap coding downstream 246262 25756303 ~ 25889552 (-)
slc19a3b LOC100700720,LOC104945055 coding downstream 388634 25742506 ~ 25747180 (-)
slc19a3a LOC103366725 coding downstream 394079 25738490 ~ 25741735 (-)
baz1b baz1b,LOC102789732 coding upstream 86336 26242881 ~ 26259016 (-)
bcl7bb bcl7b,LOC102791254 coding upstream 102901 26259446 ~ 26261795 (-)
gdpd1 gdpd1 coding upstream 181006 26337551 ~ 26348184 (-)
LOC120574272 pde2a coding upstream 315095 26471640 ~ 26663398 (-)
LOC120575574 arap1 coding upstream 527018 26683563 ~ 26744794 (-)
G19551 NA non-coding downstream 7394 26124237 ~ 26128420 (-)
G19466 NA non-coding downstream 404699 25721493 ~ 25731115 (-)
G19438 NA non-coding downstream 468585 25622986 ~ 25667229 (-)
G19412 NA non-coding downstream 669308 25430426 ~ 25466506 (-)
G19401 NA non-coding downstream 722292 25413195 ~ 25413522 (-)
G19566 rnf7 non-coding upstream 12129 26168674 ~ 26170568 (-)
G19663 hip1 non-coding upstream 139954 26296499 ~ 26300091 (-)
G19660 NA non-coding upstream 151192 26307737 ~ 26310671 (-)
G19665 NA non-coding upstream 155072 26311617 ~ 26412574 (-)
G19685 NA non-coding upstream 250743 26407288 ~ 26408748 (-)
trip12 trip12 other downstream 46112 26041295 ~ 26089702 (-)
G19270 ptx3 other downstream 1882901 24248031 ~ 24252913 (-)
G19140 gmps,LOC102797084 other downstream 2307860 23823821 ~ 23827954 (-)
slc33a1 slc33a1 other downstream 2326362 23802515 ~ 23809452 (-)
atm atm,LOC102794456 other downstream 2376988 23729488 ~ 23758826 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other upstream 150519 26307064 ~ 26334719 (-)
LOC120570434 fam124b other upstream 277736 26434281 ~ 26445935 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other upstream 294835 26451380 ~ 26469896 (-)
G19840 NA other upstream 932061 27088606 ~ 27089064 (-)
cwf19l2 cwf19l2 other upstream 1668060 27824605 ~ 27847548 (-)

Expression


Co-expression Network