smtla


Basic Information

Item Value
gene id smtla
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 22347311 ~ 22352582 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821718.1
AACTAGAAAGGACTTGAAGACTACTGACAGAATGCACATGGTGACAGTCATGCAGCAGGGTGTATGGGCTGTCTTGCTCTTGCCCTATCTTCTTACCGTAAGCATCCCGCTAGACTGTAGGGAAGAGCAGGGTAGCCTCTCCCGCTGCCCTTCCATCTCCCAAGAGAAACTCCTAGACCGAGTCATCCAGCATGCTGAGCTAATCTACCGTGTCTCAGAAGAATCATGCTCCTTGTTTGAGCAGATGTTTATCCCGTTCCCATTGCAGCTCCAGAGGAACCAAGCAGGCTATGCATGCATCACAAAAGCTTTACCCATCCCCAGCTCCAAAGGTGAAATCCAACAGATATCTGACAAATGGTTGCTCCACTCTGTGCTGATGCTCGTCCAGTCGTGGATCGAGCCTTTGGTCTACCTGCAGACCTCACTGGATCGCTACGATGCCGCTCCTGACATGCTGCTCAACAAGACCAAGTGGGTGTCTGAGAAACTGATCAGTCTGGAGCAAGGTGTTGTGGTCCTCATCAAGAAGATGTTGGATGAGGGAATGTTGACCACAACCCGCAGTGAACAGGGCCTATTCCAGTATGATGTGCAGCCAGAGATGCTGGAATCTGTGATGAGAGACTATACCTTACTCAGCTGCTTCAAGAAAGATGCCCATAAGATGGAGACTTTCCTAAAGCTACTGAAATGTCGACAAACTGACTTATACAACTGTGCATAAGACATGAagcaaaatgtttaaataatacAGCTTTAAATGAATTCCTAAGGTTGGTAGCCGTGCACTTAAAGACATGACCATGCCTTAGGCAATTCAGCCTTGCTTGCATTGCAGTACATTCTTTATTGATTGTTTTGGAACACCTTCACACAAACCTAGTAGGTGCAATGCTGTGCCCTTTCTACAACACTGCATTTTATATTTCCCTTCtcacttgtttttttaacctggcAAAGGCAACAGAGGGCAAACTCCCAAAAGATTAGTTGCGTGTCGAGCTGTCAAAAAAATCTGCATATCCTACCATTGATttccatttcctttgttcttaACTGGAGTTTGTATTCCTCGCTGGCTCTTGCAGTGTTTTGATTATTCCCACGGCCCCCAGAGAATTCAGTGAGACGGTTTCACTTCTGCATTAGTGAAATGAAACACTTTCAACGGAGATGGGAGTCAAGCAGAGAGCAATCACTACTTTAAATAAGACACACATTTTGATTGGTGTAAGAGAGTGTGAGGGAGACAGTGAGAGGGAACAAATAACAGCTAAAATGAGGGGTAATGCTTATCTGGAGTTTTAGGTTGGCGCTCATGACAGATTCAGGAATGTTCCCATGCCTAAATATGCCTAATTTAACctgaatataatataataacttaTTCACTTGAAATGATAAGAGGAGATACAGCTTACATTTGAATTGTTAGATGTTATGAATATGTAATGCAGAAATCAAACTATTTTTGCAATCTTTTGTGTAAATAGAAGAACCCCAATGTACAGTGGAAACCTTTCTAGTGGACTGCTGATTTAAGGCACTAATAAAGCAAATTGTAGA

Function

NR:

description
PREDICTED: somatolactin-like

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05438 GH; growth hormone

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821718.1 True 1569 mRNA 0.43 5 22347311 22352582

Neighbor

gene id symbol gene type direction distance location
fli1 fli1,LOC106612965,LOC103145351,LOC106905187 coding downstream 113532 22200134 ~ 22233779 (-)
kcnj5 kcnj5 coding downstream 167650 22151337 ~ 22179661 (-)
srpra srpra coding downstream 293711 22044181 ~ 22053600 (-)
siae NA coding downstream 552367 21787540 ~ 21794944 (-)
mmp13b mmp13 coding downstream 589132 21754393 ~ 21758179 (-)
LOC120551448 NA coding upstream 436462 22789044 ~ 22799012 (-)
barx2 barx2 coding upstream 508369 22860951 ~ 22871590 (-)
rbm7 rbm7,LOC104959492 coding upstream 522483 22875065 ~ 22882453 (-)
LOC120546095 NA coding upstream 806714 23159296 ~ 23162078 (-)
lbhl LOC102301737,LOC102196385,LOC100690809,LOC103154600,LOC108238121,LOC106945137 coding upstream 809620 23162202 ~ 23169207 (-)
G18795 NA non-coding downstream 61102 22283003 ~ 22286209 (-)
G18770 NA non-coding downstream 158624 22188263 ~ 22188687 (-)
G18758 NA non-coding downstream 199014 22148039 ~ 22148297 (-)
G18669 NA non-coding downstream 468547 21819989 ~ 21878764 (-)
G18626 NA non-coding downstream 651589 21632980 ~ 21695722 (-)
G18803 NA non-coding upstream 11689 22364271 ~ 22364495 (-)
G18810 NA non-coding upstream 79971 22432553 ~ 22432962 (-)
LOC120548681 NA non-coding upstream 282995 22635577 ~ 22636410 (-)
G18837 NA non-coding upstream 425154 22777736 ~ 22779777 (-)
LOC120572359 NA non-coding upstream 441844 22794426 ~ 22795639 (-)
LOC120551419 LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978 other downstream 340136 21983302 ~ 22007175 (-)
gdpd5b gdpd5,LOC103357216 other downstream 636948 21664076 ~ 21710363 (-)
LOC120572205 NA other downstream 732065 21610814 ~ 21615246 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other downstream 1085388 21237188 ~ 21261923 (-)
si:ch1073-340i21.1 NA other downstream 1250110 21094177 ~ 21097201 (-)
G18885 gramd1b other upstream 786631 23139213 ~ 23148515 (-)
G18948 LOC103474743 other upstream 894021 23246603 ~ 23252420 (-)
LOC120574680 NA other upstream 1100965 23453547 ~ 23461044 (-)
atm atm,LOC102794456 other upstream 1376906 23729488 ~ 23758826 (-)
slc33a1 slc33a1 other upstream 1449933 23802515 ~ 23809452 (-)

Expression


Co-expression Network