LOC120572483


Basic Information

Item Value
gene id LOC120572483
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 34628850 ~ 34638247 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821824.1
CGCTTCTCACGCGCAATGATCTTCGCCATCGAGGAGATAAACAacagcacagagctgctgcCGGGAATCAAACTCGGTTATCAGATCTATGATTCGTGCGCCTCGGTGCCCGTGGCGGTGCATGTGGCATTCCAGATTTCAAATGGCCCGGACCCGGTGTTTTACACCGGTGACAATTGCTCACAAACTGGTATGGTGATGGCTGTCGTTGGTGAGTCTGGGTCCACGCCAACCATCAGCATGTTGCGCATCACTGGGCCCTTTAACATTCCTCAAGTGAGCTACTTTGCCACTTGTGCATGTCTGTCCAATAAGCAGCAGTACCCGAATTTCTTCAGAACCGTCCCTAGTGATCAGTTCCAGGCTGACGCGCTAGCCAAGCTGGTAAAACACTTTGGCTGGACTTGGATAGGTGCTGTCCGGTCAGATTCGGACTATGGCAATAATGGTATGGCGTCTTTCCTGGACGCAGCACGCAAAGATGGGATCTGTGTGGAATACTCTGAATCTTTCTATCGGACCCAACCACGTAGCAGGATCCAGAGAATAGCTGATGTTATCCGCAGgTCGACAGCTATGGTTGTTGTGGCATTTGCAGCATCTGGAGATATGAGGCTTCTGCTGGAGGAGCTGTCGCTTAAGCCTTCTCCACCTCGCCAGTGGATAGGCAGTGAAGACTGGgtaacagacacagacatgctGAGGTTCAGCTTCTGTGCTGGAGCCATCGGATTTGGCATTGAGCGATCTGTCATCCCAGGTCTGAGAGACTTCTTGCTggatctctctccctctaaaGTGGCTGCCTCTCCAGTGCTTACAGAGTTCTGGGAGGATGCATTCAATTGCAGGCTGGGAAAAAGTGCAGCagatgagagagtgtgtgatggAACTGAAGACATAAAGACGCTCCAGAGCCCATACACTGACACATCTCAGCTCCGAATCACTAACATGGTATACAAGGCTGTTTATGCAATAGCTAATGCCGTTCATAAAGCAATGTGTCAGGAAACAAATTCTACAACTCAGTGTGACAAATTCACCAGGATAGAATCCAAAGAGGTTCTTTCTCAGctgaaaaaagtaaatttttccCGAAATGGGTATGATGTGTCATTTGATGCCAACGGTGATCCTGTGGCCAGATACGAGCTGGTAAACTGGCAAAAAAGTGACAGTGGCAGCATTAAGTTGGTGACAGTAGGGCACTACGATGCATCACTGCCGGTGGGCCAGAAGTTCCGTATCAACAGGAACCTCACCTGGGTGGACGGTGGCACACGAGTGCCTGTGTCAATGTGCACTGACAGGTGTCCTCCAGGAACTCGTAAAGTGCTGCAGAGAGGAAAACCCATCTGCTGTTATGATTGTATACTGTGTCCTGAGGGAGAGATTAGCAATGCTACAGattcCCGTGAATGTTTCCCTTGCCCCAAGGAGTTCTGGCCTAATGCAAAGAGAGACACTTGTCTCCCCAAGCCTGTAGAGTTTCTTTCCTACAACGAGGTCCTAGGAATCATCCTGGCTGCATTCTCAGTTGGTGGTGCCTGTCTGGCCATTATAACAGCGGCTGTGTTCTATCGTCACAGGACATCCCCGATTGTCAGGGCCAACAACTCTGAGCTGAGCTTcctgctgctcttctccctgaCTCTATGTTTCTTATGTTCATTAACTTTCATTGGAGCACCCTCTGAGTGGTCCTGCATGCTGCGCCACACAGCGTTTGGGATCACCTTTGTCCTCTGTATGTCTTGTGTTCTTGGAAAAACAATAGTAGTGTTAATGGCCTTCAAAGCTACACTCCCAGGTAGTAATGtcatgaaatggtttggtcctCCACAGCAAAGAATGACTGTAGTGTCTTTCACGTTTATTCAAGTCTTAATATGTACTATTTGGTTGGTTCTTAGTCCCCCTTTTCCAATGAAAAACCTAACCATATACAAAGAGAGAATCATCCTGGAGTGTGCATTAGGCTCAGCTATTGGGTTCTGGGCTGTGCTCGGGTACATAGGCCTACTGGCTGTCTTTTGCTTTGTGTTAGCTATCCTAGCTCGGAAATTACCTGATAATTTTAATGAAGCCAAGCTCATCACCTTCAGCATGCTGATATTCTGTGCAGTCTGGATCACCTTTATTCCTGCATATCTCAGCTCTCCTGGGAAATTTACTGTGGCTGTGGAGATATTTGCCATTCTGGCCTCCAGTTTTGGACTAATACTGTGTATATTTGCTCCAAAGTGTTTCATTATATTATTGAAGCCAGAGAAAAACACCAAGAAACATTTAATGAACAAACATCAATCCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821824.1 True 2316 mRNA 0.48 7 34628850 34638247

Neighbor

gene id symbol gene type direction distance location
LOC120547343 NA coding downstream 1123 34622670 ~ 34627727 (-)
LOC120570314 NA coding downstream 20086 34603222 ~ 34608764 (-)
LOC120570310 NA coding downstream 31334 34587014 ~ 34597516 (-)
LOC120551680 NA coding downstream 53576 34570078 ~ 34575274 (-)
LOC120551668 NA coding downstream 75354 34541731 ~ 34553496 (-)
LOC120547358 NA coding upstream 5600 34643847 ~ 34649333 (-)
LOC120547374 NA coding upstream 20514 34658761 ~ 34663643 (-)
LOC120551684 NA coding upstream 43630 34681877 ~ 34688962 (-)
LOC120572251 NA coding upstream 61855 34700102 ~ 34709459 (-)
LOC120551691 NA coding upstream 79239 34717486 ~ 34734621 (-)
G21665 NA non-coding downstream 197552 34431071 ~ 34431298 (-)
G21640 NA non-coding downstream 458355 34169362 ~ 34170495 (-)
G21620 NA non-coding downstream 470404 34090331 ~ 34158446 (-)
G21575 NA non-coding downstream 634597 33993936 ~ 33994253 (-)
G21574 NA non-coding downstream 635857 33992791 ~ 33992993 (-)
G21685 NA non-coding upstream 147676 34785923 ~ 34786236 (-)
G21716 NA non-coding upstream 271118 34909365 ~ 34909721 (-)
G21779 NA non-coding upstream 377800 35016047 ~ 35016280 (-)
G21805 LOC107597532,LOC100125490,LOC103474213,LOC103139657 non-coding upstream 597828 35236075 ~ 35240308 (-)
G21854 NA non-coding upstream 783034 35421281 ~ 35421721 (-)
LOC120570300 NA other downstream 64305 34555835 ~ 34564545 (-)
G21674 NA other downstream 146817 34481458 ~ 34482033 (-)
LOC120548089 gpr149,LOC102798740 other downstream 524030 34093140 ~ 34104820 (-)
mfsd1 mfsd1 other downstream 999582 33613429 ~ 33629268 (-)
LOC120549978 NA other downstream 1485587 33129495 ~ 33143263 (-)
dyrk1ab dyrk1a other upstream 408931 35047178 ~ 35096251 (-)
zgc:77784 LOC103362442 other upstream 627048 35265295 ~ 35336232 (-)
lrfn1 lrfn1 other upstream 1338495 35976742 ~ 36264039 (-)
taok1a LOC103356490,LOC104958432 other upstream 1671670 36309917 ~ 36330409 (-)
dph1 dph1,LOC102789142 other upstream 1822432 36460679 ~ 36550114 (-)

Expression


Co-expression Network