LOC120572775


Basic Information

Item Value
gene id LOC120572775
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6534469 ~ 6535401 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822208.1
ATGATCATGATAAACTCTACACAGGTTTCATATTTTACTTTTGGTGCATACTTTGATATTGGGCTCTTTAAATACTTATTTTTCACAAttattatctgtttttatgctttAATAGTTTGTGCCAATCTTTTGCTGATTGTGGTTATCTGTATGAACAGAAGCTTACATGAACCTATGTACCTTTTTCTGTGCAGCCTGTTTGTAAATGAACTGTTTGGTAGTACAACAATGTTACCATTCCTTCTGGTTCAGATCctctctgacattcacactgtttctgcttctctttgtttcctgcagatttattgtgtgtttgcatatggaACTATAGAAATGATTAATTTATCCGTAATGTCTTATGACAGATATCTTGCTATCTGTTATCCTCTGCAATATAACACAAGTATGACATCTAACAAGGTTGCCGTGCTTATTGCTCTAACATGGTTATTCCCATTGATTGAAGTTGCTGTCAAAATATCTTTGAGTTCCTctttacagctgtgtgggaACATCATTAACAAAGTTTACTGTGATAACTATTCTGTTGTCAAACTGGCCTGCTCTGTCGCCACAGTGAACAACATTTATGGACTCATTTACACTTGTCTTATAGTCTTTGGTCCTCTCAGTTTAATCCTTTACACCTACATGAAGAtccttaaagtgtgtttttctgGTTCTAAACAGACCAGACAGAAAGCTGTCAGTACCTGCACACCTCACCTTGCTTCTGTACTCAACTTTTTCTTTGGTTCTTTCTTTGAAATAGTACAGAGCAGGTTTGATATGAGCAGTGTACCCATGATGTTGcgcatttttttgtcattatatGTTCTTACCTGCCAACCAATCTTTAATCCTTTAATGTATGGTCTGCAAATGTCCAAAATACGTGGCTTATGTAAAAGTCTTGTCTTCGGTAAAATGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822208.1 True 933 mRNA 0.36 1 6534469 6535401

Neighbor

gene id symbol gene type direction distance location
LOC120552698 NA coding upstream 8306 6525208 ~ 6526163 (+)
LOC120545383 NA coding upstream 13685 6510745 ~ 6520784 (+)
LOC120572075 NA coding upstream 17953 6512177 ~ 6516516 (+)
abcg1 abcg1,LOC103475277,LOC103152983,LOC102205798 coding upstream 86141 6420513 ~ 6448328 (+)
LOC120549609 NA coding upstream 181468 6350475 ~ 6353001 (+)
LOC120552719 NA coding downstream 5962 6541363 ~ 6542380 (+)
LOC120545393 NA coding downstream 15289 6550690 ~ 6551630 (+)
LOC120572346 NA coding downstream 54335 6589736 ~ 6590668 (+)
LOC120545404 NA coding downstream 64358 6599759 ~ 6607610 (+)
LOC120545410 NA coding downstream 76911 6612312 ~ 6613238 (+)
G14930 NA non-coding upstream 22583 6511135 ~ 6511886 (+)
G14928 NA non-coding upstream 24495 6508571 ~ 6509974 (+)
G14917 NA non-coding upstream 39819 6494388 ~ 6494650 (+)
G14908 NA non-coding upstream 57323 6476674 ~ 6477146 (+)
G14907 NA non-coding upstream 60700 6473510 ~ 6473769 (+)
G14939 NA non-coding downstream 42821 6578222 ~ 6578453 (+)
LOC120572178 NA non-coding downstream 154630 6690031 ~ 6690891 (+)
G15012 NA non-coding downstream 408921 6944322 ~ 6991913 (+)
G15021 NA non-coding downstream 442398 6977799 ~ 6978105 (+)
G15032 NA non-coding downstream 481394 7016795 ~ 7017311 (+)
spcs2 spcs2 other upstream 116960 6407985 ~ 6417509 (+)
rnf169 NA other upstream 130044 6393062 ~ 6404425 (+)
G14344 NA other upstream 1005850 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1117334 4801340 ~ 5417135 (+)
G14209 LOC102792843 other upstream 2007092 4500173 ~ 4527377 (+)
G15019 NA other downstream 437444 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 862700 7398101 ~ 7399141 (+)
G15234 NA other downstream 955964 7491365 ~ 7492057 (+)
rffl rffl other downstream 1271408 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 1291209 7826610 ~ 7828087 (+)

Expression


Co-expression Network