c18h3orf33


Basic Information

Item Value
gene id c18h3orf33
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 34973004 ~ 34976362 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822474.1
AGGCACTTGTATTCCCCTCCCACAGGCGGAGCGCCGGATGCATCAAGAAAATGTCAACAACATGCCGGAGTCTTCCAGAGAAACCGAAACTGACGAGAGAGTGACGGGCAGACAACAAAGAGATCACGGAAACCAGTCCTCTCATAACATCGTGGCGATAATATCTCAGTTCGCGGATGATAATTTAACACTTGTGCGGAACATAAGCACCGGACTGGCAGTTGCTGGTGTTATTGTAATAGCAAGGAGCATCAAACTGATCACCAAATTTCACGCTGCGTCTGAGATCCCTGCTCGTTTTATTGAGAGGAACATCAGCCTCCGTGGGAAAGTTCATTCAGTCACAGAGAGAGGACTTGAAGTGGAACATGTCCCAATTCATCTGCCAGTCCTCTCTCCGTTGCTTTCGAAACACAAAGGTGTGTGCACGTCCCTGATGCTGGTGCATCTTGCAGGAGTGGAGTTGACTCCAGAGGGCATGGTATGGCTGCAGAAGAACCTGGCTCCTGCCCAAACAGTCTGGCTAAAACTTATCAGCCGAGAGGACGACATGCTACACTGTTTGGTGTATCAAAGCAGGGGGTTGATGTGGAGCTACAGTTTGAGTGAAAAGGTCCTCATGCTCGGTCTGGCTCGCACTGCGCCCTTGGTCGGGGTCCTGCCTGGCTCTCGCCTTTATTGGCGTCTCCACAAACGGTTACACAGGGCAGAGGTCAAAGCTGAGAGGAAGGGGCGGGGACTGTGGAAGCAGGACAGCCTATGGGAGAGGGCCTCCAAGGCTGTCAGGGACAACCCTTTATTCAGACTGATGAGGAGGATCTTTAAGAGGAGTTGATGCACTAAGTGATCCTAATCATGAATGTATTCATTCAGTATACCCGTTAGTGTCAACTGATATATTGAGTTTAAAAGTCACACTACAGGCTACAAAAAGTGCCATCCATCTCTAATCTCTCATGTATGACAGATATGCTTCAGTGCtataaaaacactttcctgaTATTACAACAAATACACCTGTTGCAAGGGTTTGTGCTTTATGGTTACTGTATTTCACAGTTTTTAGAAGtttgaaatgattaaaaaaaactatctcTAAC

Function

NR:

description
protein C3orf33 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822474.1 True 1100 mRNA 0.47 5 34973004 34976362

Neighbor

gene id symbol gene type direction distance location
plch1 plch1,LOC103364399,LOC101474427,LOC107380077 coding downstream 798 34900430 ~ 34972206 (-)
LOC120551709 LOC104964223 coding downstream 84950 34871873 ~ 34888054 (-)
LOC120549655 LOC104964223 coding downstream 103584 34865640 ~ 34869420 (-)
LOC120547817 NA coding downstream 206871 34748462 ~ 34766133 (-)
LOC120548153 NA coding downstream 228418 34735651 ~ 34744586 (-)
zgc:112083 NA coding upstream 41884 35018246 ~ 35027432 (-)
map6b LOC103364403,LOC102775646,LOC100702126,LOC101476458 coding upstream 58330 35034692 ~ 35040789 (-)
LOC120548171 LOC100701857,LOC103364405,LOC102289028,LOC102776134 coding upstream 64759 35041121 ~ 35046088 (-)
trnap-cgg NA coding upstream 70516 35046878 ~ 35046949 (-)
LOC120553235 NA coding upstream 90636 35066998 ~ 35110606 (-)
G21716 NA non-coding downstream 63283 34909365 ~ 34909721 (-)
G21685 NA non-coding downstream 186768 34785923 ~ 34786236 (-)
G21665 NA non-coding downstream 541706 34431071 ~ 34431298 (-)
G21640 NA non-coding downstream 802509 34169362 ~ 34170495 (-)
G21620 NA non-coding downstream 814558 34090331 ~ 34158446 (-)
G21779 NA non-coding upstream 39685 35016047 ~ 35016280 (-)
G21805 LOC107597532,LOC100125490,LOC103474213,LOC103139657 non-coding upstream 259713 35236075 ~ 35240308 (-)
G21854 NA non-coding upstream 444919 35421281 ~ 35421721 (-)
G21885 NA non-coding upstream 606119 35582481 ~ 35582706 (-)
G21941 NA non-coding upstream 859627 35835989 ~ 35837435 (-)
LOC120570300 NA other downstream 408459 34555835 ~ 34564545 (-)
G21674 NA other downstream 490971 34481458 ~ 34482033 (-)
LOC120548089 gpr149,LOC102798740 other downstream 868184 34093140 ~ 34104820 (-)
mfsd1 mfsd1 other downstream 1343736 33613429 ~ 33629268 (-)
LOC120549978 NA other downstream 1829741 33129495 ~ 33143263 (-)
dyrk1ab dyrk1a other upstream 70816 35047178 ~ 35096251 (-)
zgc:77784 LOC103362442 other upstream 288933 35265295 ~ 35336232 (-)
lrfn1 lrfn1 other upstream 1000380 35976742 ~ 36264039 (-)
taok1a LOC103356490,LOC104958432 other upstream 1333555 36309917 ~ 36330409 (-)
dph1 dph1,LOC102789142 other upstream 1484317 36460679 ~ 36550114 (-)

Expression


Co-expression Network