LOC120573061 (LOC100706961,LOC103359448)


Basic Information

Item Value
gene id LOC120573061
gene name LOC100706961,LOC103359448
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 18119297 ~ 18124891 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822496.1
AGACCCCTTGGCAGTGAGTGAGAGGTTAATGGCTTTTGGTAAACCACTTCCTTGACTGTATTCTCAGTATTCATTCTGAGGTTTAACAGAAATCAAATTAGAGTAAGATCTTGTTTTCTGAGGCTGGGGCGTATTTAGAACGTGTGCATATTCTCTGCCATGGCATCACTGACATCTTCCAGCCGCAGATCCTCCTCATCCTACCGCTCATCGTCACGTTACAGCACCTCCAGCACCCATCGGTCAGAGGGCTCACTGGGTGGATCGTCTGATTCTTTGGATCCCCTTTTTGAGCCGTTTCTTGACTCTGCTGATCATTCCAGTCTGTTTGTAGAAGAGAGCCCCAGAGGACCCAGTTGTTTGGCCCCCTTCAGCAGACACAGCAGATCATCCTATGGACACACTGCTCCTGTAGGCGGTACTTTGACAGGCCGACAGAGCAGCACAGGTGGCGGGGTGCGATGTCTGGGAGATAGCTACTACATGTCAGCTGACGTCAGCCAGTTTGAGCCGCATGACATAGTGGTGATGGCCTATAACCACCATGTTGTCATTCATGCccagaagGTACTAGATGATGGAAGTATCAGTGACACATTCACCCATAAGTCCCTGTTTCCGGAGGATATGGACCCATTGTCGGTCAGTGGGACCCTTAACCCTGATGGTACCCTGGTGGTGAGTGTCCACCGGACCACGACCCTGGGTGGGCTGGAGCCCCTGGGTGTCCCCACCTACCGCAGTGAAGCTCACCTTTGACTTAATGTGGCTTCATCTTCTCACAGTAtctcagctttttttttatattatttgatGACAGTGTTGTGAGGTACACTCACCTATCAAGCCGATCAAGGCATTATAATTTAAATGTCTGTGAATAACAGCACACTTTGGTCCATTGGAACATATCACAGAAACTTCTGGGaagattgccatgacatttaaTATTAACATTAATGACTTGAATAATGATTATTTATATCATTGAAATTGGTGACCCCCGGACCTTATGTCCGGCACCACTGGTCAAATCTTTCCCTTCATCAATGGGGTGGGGGTTGCTGTCTGCCACagtatctttttatttattaattactaCTAGTCAGATATTTTTGAGTGGCTTTCATTTTTTACTATGACATACTGCACACAGACCATGAAACCCGCCGAAAGTGCATGTTTAActattaataaattataatcTACTTTTTTTATATGGATCTTTATCTAAATCTAAATTTGTGCTGTACATTTAACGTTTTACAATTACAGCAAGCCGGCAACTTTGTCTGTAGTGTCAAACTAAATTGTATGAGGAATTTGTCGTTTCTCAGACATGcaataaatgtgtttgttttttttacaaa

Function

NR:

description
PREDICTED: heat shock protein beta-7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822496.1 True 1370 mRNA 0.44 3 18119297 18124891

Neighbor

gene id symbol gene type direction distance location
zgc:153039 LOC103359447,LOC103377809 coding downstream 375673 17665818 ~ 17743624 (-)
LOC120544259 ecel1 coding downstream 485248 17504799 ~ 17634049 (-)
tmem199 tmem199 coding downstream 888932 17227524 ~ 17230365 (-)
gemin4 NA coding downstream 956593 17155692 ~ 17162704 (-)
LOC120551331 NA coding downstream 1169461 16947756 ~ 16949836 (-)
alp3 LOC103377813,LOC108248287 coding upstream 32224 18157115 ~ 18170945 (-)
psmd2 psmd2,LOC102798368 coding upstream 99621 18224512 ~ 18236516 (-)
dhrs12la LOC102209276,LOC100699243,LOC101076961 coding upstream 163396 18288287 ~ 18298760 (-)
scg2a NA coding upstream 179224 18304115 ~ 18307527 (-)
kcne4 kcne4 coding upstream 210305 18335196 ~ 18337515 (-)
G17782 NA non-coding downstream 270278 17844434 ~ 17849019 (-)
G17745 NA non-coding downstream 362865 17756168 ~ 17756432 (-)
G17739 NA non-coding downstream 426029 17692996 ~ 17693268 (-)
G17716 NA non-coding downstream 646351 17472679 ~ 17472946 (-)
G17714 NA non-coding downstream 651806 17465020 ~ 17467491 (-)
G17917 farsb,LOC102796683,LOC102210931 non-coding upstream 258268 18383159 ~ 18383539 (-)
G17936 NA non-coding upstream 468084 18592975 ~ 18593673 (-)
G17964 NA non-coding upstream 624307 18749198 ~ 18749401 (-)
G17986 NA non-coding upstream 1030071 19154962 ~ 19155251 (-)
G18002 NA non-coding upstream 1106028 19230919 ~ 19234457 (-)
LOC120552194 NA other downstream 228636 17799999 ~ 17890661 (-)
xaf1 LOC107094331 other downstream 640394 17472947 ~ 17478903 (-)
G17597 NA other downstream 1188303 16848161 ~ 16930994 (-)
sdhdb sdhd other downstream 2058889 16046008 ~ 16060408 (-)
G17287 NA other downstream 2400256 15695554 ~ 15719041 (-)
zgc:165508 fam131a,LOC102799247 other upstream 2575 18127466 ~ 18151968 (-)
LOC120545639 eif4g1 other upstream 54122 18179013 ~ 18222893 (-)
fbxo46 fbxo46,LOC102786997 other upstream 1576336 19701227 ~ 19717307 (-)
si:ch211-11n16.2 LOC104927205,LOC101481481,LOC100694251,LOC103369702,LOC107094496 other upstream 1675860 19800751 ~ 19810130 (-)
LOC120547993 NA other upstream 2012181 20137072 ~ 20141538 (-)

Expression


Co-expression Network