slc19a3b (LOC100700720,LOC104945055)


Basic Information

Item Value
gene id slc19a3b
gene name LOC100700720,LOC104945055
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 25742506 ~ 25747180 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822503.1
GTTAGGCTTCAGATATAGAACAAGGTCTCAGGCAGCactcctgaaaataaaaaactaaagacAATCTCTGGGAAATTCtgctgaggtaaaagcatgggcAGTTGGGCCAAGCTGAAGTCCTCTAGCTGGGCTTATCCTACTGCAGTCCTGTCACTCTATGGTTTTTTTGCTAACTGCAGAGTAGCAGAGCCCTTCCTCACACCATACTTAATTGGACCACACAAGAACATCTCTGGAGAAGTGGTGACTAACTACCTGTTCCCTATCTGGACGTACTCCTACCTCGCCTTCCTTTTCCCCGTCTTCCTCCTGACTGACTTCCTGAGGCACAAGCCCCTCATTGTGGTACAGGGTCTCTTCCTGGTCACCAACTATGTCCTGCTCTGTTTTGCACCGGGGCTGCCTGCTATGATCTTCCTTCAGATCAACTATGCTGTAGTGACTTCCACAGAGGTGGCCTACTTTTCCTACATTTACAGCGTAATTCCAGTTGAGAATTACCAAAGAGCCACTGGTTACCTGCGCAGTGCTATGCTAACTGGGTATACATTTGGTGCCAGCCTGGGCCAAGTGCTGGTCTCCCTGGCAGGAGTGGACTACTTCTACATCAATGCTATCACTCTGGGGATGGTAAGCATGGCTTTTCTAATCTCCTTCTGGTTGCCCATGCCCCAGAGGAGCCTGTTTTTCAAAGGGATAAAGGCAGCAGCAGTGGGCTCGCAGTCCCAACAGAAGGGGCCTCTGGGAGTGGATGTGCCCGAGGAACCAGTGGTGGCTGGGGATGAAGCTGGCTCAGGGAGAGAGAAGATGGAGCATAATGGCAGTGCTGGCTGGTGCAGCTGGAAAAATGTGGCCACTGCAGGCCATCTACTTTGGCAAAGCTTCAGGGAGTCATATTCTTCCAGGGATTTAATCTACTGGTCTGTGTGGTGGGCTCTGGCCACGGCTGGCTACGTGCAGGTGTTCAACTACACCCAGCTAATGTGGGACCATATAGAACCATCTGCAACATCATCTATCTACAACGGAGGTGTAGAGGCTGCGTGCTCCCTTGTAGGTGCTGCAGCAGCCTTCTCCGTGGGCCACATCAAGGTGACCTGGGCCGTGTGGGGAGAGCTGGCATTAGGGTTGTTCTCAGCCGTAGGGACAGGTGCTGTGTTTCTGATGGCGCTCACCAGCAGTATCTGGGCATGCTATGCTGCTTATGTCATATTTAAGTCCTGCTACATGCTTCTCATCACCATCACAACATTTCAAATCGCATCCAACCTCTCCATGCAGTGCTACGCCTTGACTTTCGGGATCAACACTTTTGTAGCCCTTTCCCTGCAGACCATTATAACGGTCATAGTTGTTGATGAAGCTGCACTGGGACTGGACATTGTGACACAGttcatcatCTACGGCAGCTACTACGCCGTCATCTCGGTGCTCTTTCTGATTCGAGGGACCTACACTGCCTGTATAAATCAACGCAATGCTGAGCACACTGAAACCAAGGAACAAGAGTCTAGTGTGGTGGTAATCTCTGCTGAGCGTTTCTGACCAAGGTCAACAAACGGTTATCATCTTGATAATACTAAACATCAGGTGAATGTTCCATTTGTTTATGGGAAATAAAATAAGCCTACATCAACAGAATTACTGTTCTCTAACGACTGCCCATAGATAGCAATGGTCTGACTAATGCATGTTTTTCATATTACCTCTACAACTTGTTATCTCTACAATAATCTACAGAGCCAAACAGCATAATAAAGCTGCAATTATTACTGGGTAGTCAAGTGTAATAAAGATTAATTCCTGCACTGCGTTGCACCAGCTATGTGTAAGTTCAAACGTACACTAGTTTAAACGCAAGTTCTAAGTTAGGTTGGAGTTTACGCACTACTTACATTTTAAGGGGTTGCACCAGCTGAAATAGTTGTAATCTTGATATTTATGTTGATTTTGAATACTCACGCTTTTGTTTACCACGAGTGGAGAGGATTTCTGACCTGCTGGCAGCAGACTTGGTGACAACTACAACTTAAagatataatatgtaatatttctgcattaaaatgcctAA

Function

NR:

description
PREDICTED: thiamine transporter 2

GO: NA

KEGG:

id description
K14610 SLC19A2_3, THTR; solute carrier family 19 (thiamine transporter), member 2/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822503.1 True 2071 mRNA 0.47 8 25742506 25747180

Neighbor

gene id symbol gene type direction distance location
slc19a3a LOC103366725 coding downstream 771 25738490 ~ 25741735 (-)
dnaaf1 NA coding downstream 31091 25708792 ~ 25711415 (-)
megf6 LOC100699370,LOC101470445,LOC102198030,LOC103366731,LOC102307182 coding downstream 42968 25639979 ~ 25699538 (-)
LOC120573181 LOC104958666 coding downstream 691733 25042764 ~ 25050773 (-)
slitrk3a slitrk3,LOC102777956 coding downstream 784321 24950375 ~ 24958185 (-)
LOC120546637 sphkap coding upstream 9123 25756303 ~ 25889552 (-)
pid1 pid1,LOC102785909 coding upstream 203371 25950551 ~ 25982215 (-)
dner dner coding upstream 239414 25986594 ~ 26038558 (-)
LOC120572189 LOC103357875,LOC102300835,LOC102196867,LOC101475975 coding upstream 388634 26135814 ~ 26156545 (-)
baz1b baz1b,LOC102789732 coding upstream 495701 26242881 ~ 26259016 (-)
G19466 NA non-coding downstream 11391 25721493 ~ 25731115 (-)
G19438 NA non-coding downstream 75277 25622986 ~ 25667229 (-)
G19412 NA non-coding downstream 276000 25430426 ~ 25466506 (-)
G19401 NA non-coding downstream 328984 25413195 ~ 25413522 (-)
G19399 NA non-coding downstream 386774 25355522 ~ 25355732 (-)
G19551 NA non-coding upstream 377057 26124237 ~ 26128420 (-)
G19566 rnf7 non-coding upstream 421494 26168674 ~ 26170568 (-)
G19663 hip1 non-coding upstream 549319 26296499 ~ 26300091 (-)
G19660 NA non-coding upstream 560557 26307737 ~ 26310671 (-)
G19665 NA non-coding upstream 564437 26311617 ~ 26412574 (-)
G19270 ptx3 other downstream 1489593 24248031 ~ 24252913 (-)
G19140 gmps,LOC102797084 other downstream 1914552 23823821 ~ 23827954 (-)
slc33a1 slc33a1 other downstream 1933054 23802515 ~ 23809452 (-)
atm atm,LOC102794456 other downstream 1983680 23729488 ~ 23758826 (-)
LOC120574680 NA other downstream 2281462 23453547 ~ 23461044 (-)
trip12 trip12 other upstream 294115 26041295 ~ 26089702 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other upstream 559884 26307064 ~ 26334719 (-)
LOC120570434 fam124b other upstream 687101 26434281 ~ 26445935 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other upstream 704200 26451380 ~ 26469896 (-)
G19840 NA other upstream 1341426 27088606 ~ 27089064 (-)

Expression


Co-expression Network