LOC120573181 (LOC104958666)


Basic Information

Item Value
gene id LOC120573181
gene name LOC104958666
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 25042764 ~ 25050773 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822720.1
CACgccttctcccccccccccccatcaatGCTTCACTCCAGCGAAACACAAACTGCTAACTGACAAGgATTTTCCATGGCAACAGTATCTCTGTGCAATGGCTTCacccttcttcttctgttaccTAATTTCCTGACTGTATCATCCGCCACCCAAGATGACCTTGTAATCAACACCAGGCATGGAAAAGTTCAAGGGAAGTTGCTTCCAGTGATGGGTGGTGATGTTAGAGCATTTTTGGGAATTCCTTATGGTAAACCTCCTCTGGGTAAACTGAGATTCAGAGCACCAGAGCCAGTAGAGAGATGGGAAGGGGTGAGGGATGCCACCAAATTCCCAAATTCCTGCTACCAGTTGCCGGATACAGCCTTTCCAGGGTTCAAAGGTGCAGAAATGTGGAACCCAAACACTCCTGTGAGTGAGGACTGTCTGTACCTAAACGTCTGGTCCCCATTTTTCAACAAAACCCAGCCTATGCCCCCACAACTTGCTCCTGTCCTTGTCTGGATCTACGGAGGCGGGTTCACTCTAGGAACATCCTCTCTGGACATTTATGATGGTCGCTTCTTGAGTAAATCTGAAAGTGTTGTTGTGGTATCAATGAATTACAGACTTGGAGCTTTTGGTTTCCTGTCTTTTCCTGACAGCAAGAACATCCAGAGCAATGTAGGCCTGCTGGACCAGCGCTTGGCCCTCCACTGGGTAGCCAACAATATAGCTGCATTTGGAGGTGATTCTGCAAAGGTGACTCTGTTTGGGGAGAGCGCTGGTTCAGCATCTGTGGGCTTTCACCTGCTCTCCCCAGGCAGCCATGGTCTTTTTCAAAGGGCTGtgatgcaaagtggctctcCTAATGCACCCTGGGCCACAATCAGCCAGACTGAGACCTGGCGCAGATCCATGAAGCTGGTGATGTTACTGGGGTGTCCCACGTCTCCTCCAGCTGATATGGAAGCTTGTCTGCAGCACGCTGATCCTTTGAAAATCTCTATGAAGCAATATGACGTTTTAATACAGCCTACAATCTTTGCGACACCCTTTGTCCCTCATGTTGATGGGGACTTCATATCAGATAAAGTCgaaGTGTTGCTTAGTACCGGTACCCTCCCAAAGACAGAGGTCATGTTTGGCCTAAACAGGGATGAAGGGACCTACTTCCTAGTTTATGGAATGCCTGGATTTAACATCACCGGTCAAAGCCTCATCACCAGGAATGAGTTTCTGAAAGGAGTGGCGATTTCAATGGCCCATGCAAGTGATGTCACAAGAGATGCGGCCATTTTCCAGTACACTGACTGGACAGATGAGAATAACAGGATGAAAAATCGCGACTCGCTGGGAAGTCTGGTTGGAGACCAACAGTTTGTTTGTCCTGTGCTAGAGTTTGCTAACAGGTACTCACAACGTGGTGGTAAGgctttcctttatttatttgaccACCGGTCTTCCGTCAATCCTTGGCCAGAATGGATGGGTGTTATGCACGGCTACGAAATAGAATTTGTCTTCGGAATGCCTCTGAATGTATCCCTGGGATACACGAAGAATGAAGTAAACATGACCAAGAAGTTTATAAAACACTGGGCCAACTTTGCCCGGAAAGGtaATCCAAGCATTGATGGAGCTAACTGGCCCGTGTTCACCCCTGAACAGCAAGCGTATGTCACTCTGAACTACAACCATCCAGAACAAAAGAGGATGATGAGAGCTAACAAGTGTCACCTCTGGAACAAATTAATGCCCAAAATACAAAAAGTATCAGATGATCTTCGGTCTTGTGTTAAAGCAAATGGGCTCATACTCCACTGTAATTACACCTTCCTCCTCATTCTGTTGGTTATAACTTTAACCTATTGATAGAGTGATGAGACCTATGTTTTATACAGCCATATACAAcagtttaaattaaatataGTGGTTTGGTCTTTACggttatttaaaacattttgtgatTGGCCTACTGAATTGTATAGTTaaagaaattgtgttttatttatggAGTGTGTGGTTTAGGTAAACGCTCCTGTTTTTTTGGAACTGTACAATAACGAGCATTCACGATTGCTTcataaagccactgtatgcagct

Function

NR:

description
PREDICTED: acetylcholinesterase-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0004104 cholinesterase activity molecular_function

KEGG:

id description
K01049 ACHE; acetylcholinesterase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822720.1 True 2089 mRNA 0.46 10 25042764 25050773

Neighbor

gene id symbol gene type direction distance location
slitrk3a slitrk3,LOC102777956 coding downstream 84579 24950375 ~ 24958185 (-)
si si,LOC107380514 coding downstream 121312 24825023 ~ 24921452 (-)
serpini1 serpini1 coding downstream 687268 24336057 ~ 24355496 (-)
LOC120551456 LOC102079500,LOC107380520,LOC101465397 coding downstream 711568 24327466 ~ 24331196 (-)
veph1 veph1,LOC106613251 coding downstream 760929 24191471 ~ 24281835 (-)
megf6 LOC100699370,LOC101470445,LOC102198030,LOC103366731,LOC102307182 coding upstream 589206 25639979 ~ 25699538 (-)
dnaaf1 NA coding upstream 658019 25708792 ~ 25711415 (-)
slc19a3a LOC103366725 coding upstream 687717 25738490 ~ 25741735 (-)
slc19a3b LOC100700720,LOC104945055 coding upstream 691733 25742506 ~ 25747180 (-)
LOC120546637 sphkap coding upstream 705530 25756303 ~ 25889552 (-)
G19356 NA non-coding downstream 107751 24934754 ~ 24935013 (-)
G19335 NA non-coding downstream 291494 24750961 ~ 24751270 (-)
G19332 NA non-coding downstream 323687 24718617 ~ 24719077 (-)
G19331 NA non-coding downstream 324203 24718326 ~ 24718561 (-)
G19320 NA non-coding downstream 391214 24650567 ~ 24651550 (-)
G19381 NA non-coding upstream 3231 25054004 ~ 25054307 (-)
G19383 NA non-coding upstream 46446 25097219 ~ 25097458 (-)
G19399 NA non-coding upstream 304749 25355522 ~ 25355732 (-)
G19401 NA non-coding upstream 362422 25413195 ~ 25413522 (-)
G19412 NA non-coding upstream 379653 25430426 ~ 25466506 (-)
G19270 ptx3 other downstream 789851 24248031 ~ 24252913 (-)
G19140 gmps,LOC102797084 other downstream 1214810 23823821 ~ 23827954 (-)
slc33a1 slc33a1 other downstream 1233312 23802515 ~ 23809452 (-)
atm atm,LOC102794456 other downstream 1283938 23729488 ~ 23758826 (-)
LOC120574680 NA other downstream 1581720 23453547 ~ 23461044 (-)
trip12 trip12 other upstream 990522 26041295 ~ 26089702 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other upstream 1256291 26307064 ~ 26334719 (-)
LOC120570434 fam124b other upstream 1383508 26434281 ~ 26445935 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other upstream 1400607 26451380 ~ 26469896 (-)
G19840 NA other upstream 2037833 27088606 ~ 27089064 (-)

Expression


Co-expression Network