LOC120573248


Basic Information

Item Value
gene id LOC120573248
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 570527 ~ 575826 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822853.1
ccagccttcctgatcagtttgttcagtttgtttgtgtcGCTGGCTCCGATGCTACTGCCCCAGCAGATGGCGGAGGAGAACAGAGCGCTGGCCACAACAGGCTGGTAGATCATCTCCAACATTCTGCTGCACATTTTGAAGGATCTCTGCTTCCTCAGGAACTATAGTCTGCTCATCCCCTTCTTGTAAACAGCAGTGCTGTTGACTTTCCATTTCAGCCTGTTGTCGATGTTGACACCCAGGTTTCTGTACTCCTCAAACATGTCCACATCTCCACCCAGAATGCAAAGGGGCTGCAGAGCCGTTCCCTTCCTCCTGAAGTCAATCACCATCTCTCTGGTCTTATCTACATTCAGCAGCAGGTGATTCTTACCAGCCCACTCCACAAAGTTGTCCACCAGCGCTCTGTACTCACCCTCCTGTCCATCCCTTATACACCCAAAAACTGCAGAGTCATCAGAAAACTTCTGTAGGTGACATGACTCTGAGTTGTACTGGAAGTCTGTGGTGTATAAggtgaaaagaaaaggagacagcACAGTCCTCTGCGGAGCTCCATTACCACTCACCACCACATCAGACAAAACACGGTCCAGACGAACAAACTGTGTCAGTGATCCAGGAGACTGTGGCCGCACCAAAACCCATCATCCTCAGCTTCTCACACAGTAGCAGTGGCTGGATGGTGTTGAATGCACTGGAGAAATCGAAAAATGTGATTCTCACAGTGCCGCCACTGCCATCCAGGTGCAAATGAGCTTGCTGCAAATTAAAGCAACTCAATGTTTAATGCCAAATTATGAACCAACTGCATGACCAGTTTAATCCCCAAACCGGCTATGTAGCCACAGTGTAATCCACGTATGCCCTGCCTTGTGCAGGCGCTCTCTACCCAGGTGCCACCCCTTGCCTAAACAAAAACAGAGTATTTCCAGAAATTGAGAATGCGTTTTTCTGTTGTGTGATACATGTGAGAAAGGAAAACTGTGCTGCAGGAAAAGTCTGTACAGCCTGGTTTCCAAAGAGTCTGTACAGCATATTAGAAACCACTGATGCCAGTCAGCCAAAATGTGCACTACTTCAGTGCTCGGATGAACCAACTCTattgtgtgtgttcagtctgtcaggctgtatgatctcagaggaaggctgttcttctctagcctcagctctgagctccaacccctcccatctgagagagctggatctaaactacaatcatccaggagactcaggtGTGAAGCTGCTGTCAGCTGGATTGAGACTGGACACTCTGAGGGTGGACAATGGTGGACGACAGTGGTTGAAACCTGGTCTGAGGAAGTatgtctgtgaactggaactggacacaaacacagtaaacacaaaactcaaactgtctgacaacaacaggaaggtgacacgtGTGAGAGAGGATCagtcatatcctgatcatcaAGAGAGGTTTGACCTCTGtcttcagctgctgtgtagaaatggtctgactggtcactgttactgggaggtcgagaggagaggagaggttcatatatcagtgagttacagaggaatcaacaggagaggagccagtgaagactgtgtgtttggatggaatgatcagtcctggtGTCTCAGCTGCTCTGATGGTGGTTACTCTGTCTGGCACAATAAGAGAATTACACCTatcaccaccacctcctcccactcctcctcctcttttctttcctccgTCTCCccattctcctcctcttcctccacctctgtctctaacagagTAGGAGTGTATGTGGACGTTCCTGCTGgcactctgtccttctacagagtctactctgactcactgattcacatccacaccttcaacaccacattcactcaaccTCTTTATCCTGGGTTTGCATTTGGGTCagctggttcctcagtgtctctggtTCCTCTGTAGGAGTGAGAGTCACTCCTGTGGACAGAAACACTGACTGAAGATCAGCTGCTGAAATCAAAGTTCAGTCTgttcaccatcacacacactctgcactgtGAAGCAGATCTGAGACTCAAATTAATTTGTCTCATCAACATTTTAAAACTatattttcttacattttcttTCGTATATTTTTGTGGTGCATCTCCTCCCCCTGCAGTCACAGTGTCCTCGGGTCAGACACCAAGCTGCTCCTGGACCAAAAGCTGATGCAGATGGGGAGAATGCTTTCCATGGTGTAGCGGTAGAATAGCTTATGACAGGACGTGGTTTGTTATCATATCACAGCTGAGGTGTGTTGTTCGGCCCAAAATATAGGGaatcttgattttttttcatagtaagcatttcattttatatttttttaaagatttgtatATCATAATGCTACAGTTAGGTGCAATGTTTCTACAGTTTGAGTTAGTCTGGCTGGAAGTGGTGTCTGGCACAATAACAGAGAAACGCCCATCtcttccccctctgtctctggtaaAGTAGCAGCGTATGTGGACGTTCCTGCTGGCACTCTCTCCACATTCACTCAACCTCTTTATCCTATATGTTTTGGCTCTGTTATAGTTTgtctggttcctcagtgtctctgtgtcctctgcaggACTGAGAGTCTCTCCTTTGGACAGAATCACTGACTCAAGATCAAAAGTGCAGTCTGTTCAGCATCACATACTCTGCATTGGGAAGCAGATTTGAGACTCAAACACAAATCACTTGTCTGATCAACATTGTAAATTTTCTTTCttatattttatgtaattttttaatatttttaatttgaggtgtatctcctcccccctcctcacAGTGTCCTGGTTCAGAGGCGAGCAGCTGGACCACACGGTGATGCAGTTAGGGAGGATGCTGTCGATGGTGCAGCGTTAGAATCACAACAAGCCGTGGTATGTTTTGATTATAGCACAGCTGAGGGAAGACAACCCTTAACTACAGGGGAATTTGGATTTTGTATAtgccaacattttattttgcttttagaGACTTGTATATCATCATGGTATAGTAAAGGTCTCTGCTCCTACTTTTTTAGTTAATTTTCCATTACACATTTTAGTTGTGATACGTATTTTATCAATTGACACTGTATACATACAGTTTGAACTTTTGCAAATTGCTTTTTGTTTGCACAAACTCTAAAgccttctttccctttctaatctaatcaatcaatcaaatcaaaaataactttatttttccgGTGAGGGAACTTCGTTTGTGGTCAGGCACCGTCAAACACAACATCTAACAATACATAGTCTGTATTAATCATACCagagaataaataaatgctaaataCTAACATACTAAAATAAACTAAGAAAACCCTGAGGGTAGAAGTAGAGGGGTGGGTAGGGAGAATAGTTTGAAGTCTTGATCGATCGATGGGGGTGGttattgtttgttgttgtctgaTGGGTGCTGGCACAAAGGTGGACATGGATCGTTTGCACCGTAGGGGATCCATtgtacatattttgttaaagtgtctttttcacttactttttattgtaatttaacAACTCTGTATTCATGTTCTTGAAGATAGCAGTGATTTGCTTTTATTGTTCATTTcctttttaatatgtttatgacAATAAATCACAATCTGAATCTGATTCTGGTTGTATTGTGGATAGCCTACATTATTTGTATTGCTTCTTGTTCTATGTGACAAAATAAAGCCGTCTGATATACATATTGTTATACATGTTGTTAGAAAGTTTGTCAATTAAGTTTTATAAACATATAAAAAGACAGTA

Function

GO: NA

KEGG:

id description
ko04391 Hippo signaling pathway - fly

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822853.1 True 3753 mRNA 0.43 3 570527 575826

Neighbor

gene id symbol gene type direction distance location
il15l NA coding downstream 109183 409173 ~ 461344 (-)
chp2 LOC108241578,LOC107097862,LOC105915343 coding downstream 374238 186389 ~ 196289 (-)
dlc NA coding downstream 468172 86153 ~ 102355 (-)
LOC120573127 NA coding upstream 191063 766889 ~ 778667 (-)
LOC120549306 NA coding upstream 210854 786680 ~ 789067 (-)
LOC120570713 NA coding upstream 272844 848670 ~ 1413931 (-)
LOC120571318 NA coding upstream 326521 902347 ~ 952303 (-)
LOC120571420 NA coding upstream 364358 940184 ~ 950453 (-)
G13220 NA non-coding downstream 1544 568632 ~ 568983 (-)
G13206 NA non-coding downstream 19771 516469 ~ 550756 (-)
G13211 NA non-coding downstream 33545 477071 ~ 536982 (-)
G13140 NA non-coding downstream 190748 376773 ~ 379779 (-)
G13136 NA non-coding downstream 249337 317728 ~ 321190 (-)
LOC120573257 NA non-coding upstream 8901 584727 ~ 596257 (-)
G13225 NA non-coding upstream 59420 635246 ~ 727829 (-)
trnar-ucu_7 NA non-coding upstream 77878 653704 ~ 653795 (-)
G13226 NA non-coding upstream 89054 664880 ~ 717068 (-)
trnar-ucu_8 NA non-coding upstream 89507 665333 ~ 665426 (-)
G13195 triap1 other downstream 183143 386401 ~ 387384 (-)
supt5h supt5h other downstream 186339 310607 ~ 384188 (-)
G13128 NA other downstream 245328 309150 ~ 325199 (-)
LOC120544598 timm50,LOC102777204 other downstream 420295 119555 ~ 150232 (-)
cep43 NA other downstream 533703 7487 ~ 36824 (-)
G13228 NA other upstream 157442 733268 ~ 736542 (-)
si:ch211-137a8.2 NA other upstream 164626 740452 ~ 750503 (-)
LOC120571545 NA other upstream 393822 969648 ~ 977738 (-)
G13587 NA other upstream 552065 1127891 ~ 1197686 (-)
LOC120571038 NA other upstream 590772 1166598 ~ 1197743 (-)

Expression


Co-expression Network